Raw read for No evidence for MHC class II-based non-random mating at the gametic haplotype in Atlantic salmon

MiSeq platform (Illumina) raw reads as described in Promerová et al (2016). "No evidence for MHC class II-based non-random mating at the gametic haplotype in Atlantic salmon". The data file consists on a compressed file divided in 6 folders. Each folder (named e.g. lib1) contains reads from one sequencing lain. Inside there are individual fasta files with reads from one individual. Each individuals is coded (file name) with three codes separated by underscore: "sample code" + "family code" + "offspring code". Codes are listed in supplementary information in files "README.csv" including also used barre code for sample identification inside within libraries

Costs and benefits of mating-type switching

Data set accompanying manuscript "Repeated evolution of self-compatibility for reproductive assurance"<p>By Bart P.S. Nieuwenhuis, Sergio Tusso, Pernilla Bjerling, Josefine Stångberg, Jochen B.W. Wolfand Simone Immler</p><p>This dataset contains the raw counts before and after competitions for competitions during asexual growth (asex_[..]) and competitions during reproduction including mating under different densities (sex_[..]). The data is analysed and plots for the manuscript are generated using the R script 'analyses_revision2.R'.<br>Cellular Automata Simulations were performed using the script in the 'Run_simulations.R' file which requires functions in 'CA_functions.R'</p

Galápagos sea lion reference genomes

Reference genomes of the Galápagos sea lion in fasta format. One is derived from the CLC workbench and the other from mapping to the Antarctic fur seal