Cooperative Chiral Order in Copolymers of Chiral and Achiral Units

Polyisocyanates can be synthesized with chiral and achiral pendant groups distributed randomly along the chains. The overall chiral order, measured by optical activity, is strongly cooperative and depends sensitively on the concentration of chiral pendant groups. To explain this cooperative chiral order theoretically, we map the random copolymer onto the one-dimensional random-field Ising model. We show that the optical activity as a function of composition is well-described by the predictions of this theory.Comment: 13 pages, including 3 postscript figures, uses REVTeX 3.0 and epsf.st

Decomposition of multicomponent mass spectra using Bayesian probability theory

We present a method for the decomposition of mass spectra of mixture gases using Bayesian probability theory. The method works without any calibration measurement and therefore applies also to the analysis of spectra containing unstable species. For the example of mixtures of three different hydrocarbon gases the algorithm provides concentrations and cracking coefficients of each mixture component as well as their confidence intervals. The amount of information needed to obtain reliable results and its relation to the accuracy of our analysis are discussed

On the completeness of quantum computation models

The notion of computability is stable (i.e. independent of the choice of an indexing) over infinite-dimensional vector spaces provided they have a finite "tensorial dimension". Such vector spaces with a finite tensorial dimension permit to define an absolute notion of completeness for quantum computation models and give a precise meaning to the Church-Turing thesis in the framework of quantum theory. (Extra keywords: quantum programming languages, denotational semantics, universality.)Comment: 15 pages, LaTe

Environment and classical channels in categorical quantum mechanics

We present a both simple and comprehensive graphical calculus for quantum computing. In particular, we axiomatize the notion of an environment, which together with the earlier introduced axiomatic notion of classical structure enables us to define classical channels, quantum measurements and classical control. If we moreover adjoin the earlier introduced axiomatic notion of complementarity, we obtain sufficient structural power for constructive representation and correctness derivation of typical quantum informatic protocols.Comment: 26 pages, many pics; this third version has substantially more explanations than previous ones; Journal reference is of short 14 page version; Proceedings of the 19th EACSL Annual Conference on Computer Science Logic (CSL), Lecture Notes in Computer Science 6247, Springer-Verlag (2010

Chiral molecule adsorption on helical polymers

We present a lattice model for helicity induction on an optically inactive polymer due to the adsorption of exogenous chiral amine molecules. The system is mapped onto a one-dimensional Ising model characterized by an on-site polymer helicity variable and an amine occupancy one. The equilibrium properties are analyzed at the limit of strong coupling between helicity induction and amine adsorption and that of non-interacting adsorbant molecules. We discuss our results in view of recent experimental results

Thurston's pullback map on the augmented Teichm\"uller space and applications

Let $f$ be a postcritically finite branched self-cover of a 2-dimensional topological sphere. Such a map induces an analytic self-map $\sigma_f$ of a finite-dimensional Teichm\"uller space. We prove that this map extends continuously to the augmented Teichm\"uller space and give an explicit construction for this extension. This allows us to characterize the dynamics of Thurston's pullback map near invariant strata of the boundary of the augmented Teichm\"uller space. The resulting classification of invariant boundary strata is used to prove a conjecture by Pilgrim and to infer further properties of Thurston's pullback map. Our approach also yields new proofs of Thurston's theorem and Pilgrim's Canonical Obstruction theorem.Comment: revised version, 28 page

Picturing classical and quantum Bayesian inference

We introduce a graphical framework for Bayesian inference that is sufficiently general to accommodate not just the standard case but also recent proposals for a theory of quantum Bayesian inference wherein one considers density operators rather than probability distributions as representative of degrees of belief. The diagrammatic framework is stated in the graphical language of symmetric monoidal categories and of compact structures and Frobenius structures therein, in which Bayesian inversion boils down to transposition with respect to an appropriate compact structure. We characterize classical Bayesian inference in terms of a graphical property and demonstrate that our approach eliminates some purely conventional elements that appear in common representations thereof, such as whether degrees of belief are represented by probabilities or entropic quantities. We also introduce a quantum-like calculus wherein the Frobenius structure is noncommutative and show that it can accommodate Leifer's calculus of `conditional density operators'. The notion of conditional independence is also generalized to our graphical setting and we make some preliminary connections to the theory of Bayesian networks. Finally, we demonstrate how to construct a graphical Bayesian calculus within any dagger compact category.Comment: 38 pages, lots of picture

Positional, Reorientational and Bond Orientational Order in DNA Mesophases

We investigate the orientational order of transverse polarization vectors of long, stiff polymer molecules and their coupling to bond orientational and positional order in high density mesophases. Homogeneous ordering of transverse polarization vector promotes distortions in the hexatic phase, whereas inhomogeneous ordering precipitates crystalization of the 2D sections with different orientations of the transverse polarization vector on each molecule in the unit cell. We propose possible scenarios for going from the hexatic phase, through the distorted hexatic phase to the crystalline phase with an orthorhombic unit cell observed experimentally for the case of DNA.Comment: 4 pages, 2 figure

Tilt Texture Domains on a Membrane and Chirality induced Budding

We study the equilibrium conformations of a lipid domain on a planar fluid membrane where the domain is decorated by a vector field representing the tilt of the stiff fatty acid chains of the lipid molecules, while the surrounding membrane is fluid and structureless. The inclusion of chirality in the bulk of the domain induces a novel budding of the membrane, which preempts the budding induced by a decrease in interfacial tension.Comment: 5 pages, 3 figure