Non-parametric statistical thresholding for sparse magnetoencephalography source reconstructions.

Uncovering brain activity from magnetoencephalography (MEG) data requires solving an ill-posed inverse problem, greatly confounded by noise, interference, and correlated sources. Sparse reconstruction algorithms, such as Champagne, show great promise in that they provide focal brain activations robust to these confounds. In this paper, we address the technical considerations of statistically thresholding brain images obtained from sparse reconstruction algorithms. The source power distribution of sparse algorithms makes this class of algorithms ill-suited to "conventional" techniques. We propose two non-parametric resampling methods hypothesized to be compatible with sparse algorithms. The first adapts the maximal statistic procedure to sparse reconstruction results and the second departs from the maximal statistic, putting forth a less stringent procedure that protects against spurious peaks. Simulated MEG data and three real data sets are utilized to demonstrate the efficacy of the proposed methods. Two sparse algorithms, Champagne and generalized minimum-current estimation (G-MCE), are compared to two non-sparse algorithms, a variant of minimum-norm estimation, sLORETA, and an adaptive beamformer. The results, in general, demonstrate that the already sparse images obtained from Champagne and G-MCE are further thresholded by both proposed statistical thresholding procedures. While non-sparse algorithms are thresholded by the maximal statistic procedure, they are not made sparse. The work presented here is one of the first attempts to address the problem of statistically thresholding sparse reconstructions, and aims to improve upon this already advantageous and powerful class of algorithm

NUTMEG:Open Source Software for M/EEG Source Reconstruction

Neurodynamic Utility Toolbox for Magnetoencephalo- and Electroencephalography (NUTMEG) is an open-source MATLAB-based toolbox for the analysis and reconstruction of magnetoencephalography/electroencephalography data in source space. NUTMEG includes a variety of options for the user in data import, preprocessing, source reconstruction, and functional connectivity. A group analysis toolbox allows the user to run a variety of inferential statistics on their data in an easy-to-use GUI-driven format. Importantly, NUTMEG features an interactive five-dimensional data visualization platform. A key feature of NUTMEG is the availability of a large menu of interference cancelation and source reconstruction algorithms. Each NUTMEG operation acts as a stand-alone MATLAB function, allowing the package to be easily adaptable and scripted for the more advanced user for interoperability with other software toolboxes. Therefore, NUTMEG enables a wide range of users access to a complete “sensor-to- source-statistics” analysis pipeline

Signal Space Separation Method for a Biomagnetic Sensor Array Arranged on a Flat Plane for Magnetocardiographic Applications: A Computer Simulation Study

Although the signal space separation (SSS) method can successfully suppress interference/artifacts overlapped onto magnetoencephalography (MEG) signals, the method is considered inapplicable to data from nonhelmet-type sensor arrays, such as the flat sensor arrays typically used in magnetocardiographic (MCG) applications. This paper shows that the SSS method is still effective for data measured from a (nonhelmet-type) array of sensors arranged on a flat plane. By using computer simulations, it is shown that the optimum location of the origin can be determined by assessing the dependence of signal and noise gains of the SSS extractor on the origin location. The optimum values of the parameters LC and LD, which, respectively, indicate the truncation values of the multipole-order ℓ of the internal and external subspaces, are also determined by evaluating dependences of the signal, noise, and interference gains (i.e., the shield factor) on these parameters. The shield factor exceeds 104 for interferences originating from fairly distant sources. However, the shield factor drops to approximately 100 when calibration errors of 0.1% exist and to 30 when calibration errors of 1% exist. The shielding capability can be significantly improved using vector sensors, which measure the x, y, and z components of the magnetic field. With 1% calibration errors, a vector sensor array still maintains a shield factor of approximately 500. It is found that the SSS application to data from flat sensor arrays causes a distortion in the signal magnetic field, but it is shown that the distortion can be corrected by using an SSS-modified sensor lead field in the voxel space analysis

Residual coherence and residual envelope correlation in MEG/EEG source-space connectivity analysis

Source-space coherence analysis has become a popular method to estimate functional connectivity based on MEG/EEG. One serious problem is that source-space coherence analysis can be confounded by spurious coherence caused due to the leakage properties of the inverse algorithm employed. Such spurious coherence is typically manifested as an artifactual large peak around the seed voxel, called seed blur, in the resulting coherence images. This seed blur often obscures important details of brain interactions. A novel method of computing coherence, called the residual coherence, is first proposed to remove the spurious coherence caused by the leakage of an imaging algorithm. We then present a theoretical analysis that shows the equivalence between the proposed residual coherence and corrected imaginary coherence proposed by others. We next extend the idea of residual coherence, and propose residual envelope correlation, which is suitable for estimating connectivity from high-frequency brain activities. Results from computer simulations demonstrate the effectiveness of the residual coherence and the residual envelope correlation

Subspace-based interference removal methods for a multichannel biomagnetic sensor array.

ObjectiveIn biomagnetic signal processing, the theory of the signal subspace has been applied to removing interfering magnetic fields, and a representative algorithm is the signal space projection algorithm, in which the signal/interference subspace is defined in the spatial domain as the span of signal/interference-source lead field vectors. This paper extends the notion of this conventional (spatial domain) signal subspace by introducing a new definition of signal subspace in the time domain.ApproachIt defines the time-domain signal subspace as the span of row vectors that contain the source time course values. This definition leads to symmetric relationships between the time-domain and the conventional (spatial-domain) signal subspaces. As a review, this article shows that the notion of the time-domain signal subspace provides useful insights over existing interference removal methods from a unified perspective. Main results and significance. Using the time-domain signal subspace, it is possible to interpret a number of interference removal methods as the time domain signal space projection. Such methods include adaptive noise canceling, sensor noise suppression, the common temporal subspace projection, the spatio-temporal signal space separation, and the recently-proposed dual signal subspace projection. Our analysis using the notion of the time domain signal space projection reveals implicit assumptions these methods rely on, and shows that the difference between these methods results only from the manner of deriving the interference subspace. Numerical examples that illustrate the results of our arguments are provided