Assessing the use of mangrove pollen as a quantitative sea‐level indicator on Mahé, Seychelles

We investigated the potential of mangrove pollen from Mahé, Seychelles, to improve existing metre‐scale Late Holocene sediment‐based sea‐level reconstructions. Mangrove species at two mangrove sites are broadly zoned according to elevation within the tidal frame. Modern pollen rain from traps deployed for 1 year generally have a poor relationship with modern vegetation, and relatively low pollen production rates. Pollen from mangrove species that live in narrow elevation zones (e.g. Avicennia marina) are poorly represented in modern pollen rain, while pollen from mangrove species that live across a larger elevational range (e.g. Rhizophora mucronata) are relatively well represented. Pollen was found in extremely low concentrations in mangrove surface and core sediments, which inhibited further study into pollen transport and preservation. The results from this modern study demonstrate that utilizing mangrove pollen would not decrease existing metre‐scale vertical uncertainties in Late Holocene sea‐level reconstructions in the Seychelles. We suggest that this approach may still be successful in other locations if mangrove vegetation is (i) zoned at a more extensive lateral scale and (ii) is closely associated with modern pollen rain and surface sediments, and (iii) sedimentological conditions promote the preservation of pollen in fossil sequences

Changes in the concentration of volatile oak compounds and esters in red wine stored for 18 months in re-used French oak barrels

Studies were made of changes in concentration of oak-wood-derived volatiles and the evolution of esters in red wine during storage in twice-used French oak barrels. Wine samples were taken after 8, 10, 12, 15, and 18 months maturation in the barrels. Results showed that most of the volatile compounds extracted from the wood (furanic compounds, volatile phenols, lactones) reached maximum concentration between 10 and 12 months of barrel storage. After 18 months of maturation many of the compounds showed concentrations similar to those found after 10 to 12 months. However, the concentrations of furfural, 5-methyl furfural, furfuryl alcohol, coniferaldehyde, acetovanillone and phenol in wines aged for 18 months were lower than those reached after 10 to 12 months. The concentration of the ethylphenols increased right up to 18 months of ageing, which can only have a negative impact on the quality of the wine. There were few modifications in the concentration of esters, except for ethyl lactate which reached peak concentration after 12 months maturation and decreased thereafter

Mid- to late Pliocene (3.3–2.6 Ma) global sea-level fluctuations recorded on a continental shelf transect, Whanganui Basin, New Zealand

We present a ∼900 m-thick, mid- (3.3–3.0 Ma) to late Pliocene (3.0–2.6 Ma), shallow-marine, cyclical sedimentary succession from Whanganui Basin, New Zealand that identifies paleobathymetric changes, during a warmer-than-present interval of Earth history, relevant to future climate change. Our approach applies lithofacies, sequence stratigraphy and benthic foraminiferal analyses to two continuously-cored drillholes integrated with new and existing outcrop studies. We construct a depositional model of orbitally-paced, global sea-level changes on a wave-graded continental shelf. Unlike many previous studies, these shelf sediments were not eroded during sea-level lowstands and thus provide the potential to reconstruct the full amplitude of glacial-interglacial sea-level change. Paleobathymetric interpretations are underpinned by analysis of extant benthic foraminiferal census data and a statistical correlation with the distribution of modern taxa. In general, water depths derived from foraminiferal Modern Analogue Technique (MAT), are consistent with variability recorded by lithofacies. The inferred sea-level cycles co-vary with a qualitative climate record reconstructed from a census of extant pollen and spores, and a modern temperature relationship. A high-resolution age model is established using magnetostratigraphy constrained by biostratigraphy, and the dating and correlation of tephra. This integrated chronostratigraphy allows the recognition of 23 individual sedimentary cycles, that are correlated across the paleo-shelf and a possible “one-to-one” relationship is made to deep-ocean benthic oxygen isotope (δ18O) records. In general water depth changes were paced by ∼20 kyr duration between 3.3 and 3.0 Ma, after which cycle duration is ∼40 kyr during the late Pliocene (3.0–2.6 Ma). This record provides a future opportunity to evaluate the amplitude and frequency of global, Pliocene glacio-eustatic sea-level change, independent of the global benthic δ18O record

Transcript analysis of 1003 novel yeast genes using high-throughput northern hybridizations

The expression of 1008 open reading frames (ORFs) from the yeast Saccharomyces cerevisiae has been examined under eight different physiological conditions, using classical northern analysis. These northern data have been compared with publicly available data from a microarray analysis of the diauxic transition in S.cerevisiae. The results demonstrate the importance of comparing biologically equivalent situations and of the standardization of data normalization procedures. We have also used our northern data to identify co-regulated gene clusters and define the putative target sites of transcriptional activators responsible for their control. Clusters containing genes of known function identify target sites of known activators. In contrast, clusters comprised solely of genes of unknown function usually define novel putative target sites. Finally, we have examined possible global controls on gene expression. It was discovered that ORFs that are highly expressed following a nutritional upshift tend to employ favoured codons, whereas those overexpressed in starvation conditions do not. These results are interpreted in terms of a model in which competition between mRNA molecules for translational capacity selects for codons translated by abundant tRNAs