The oral-aboral axis of a sea urchin embryo is specified by first cleavage

Several lines of evidence suggest that the oral-aboral axis in Strongylocentrotus purpuratus embryos is specified at or before the 8-cell stage. Were the oral-aboral axis specified independently of the first cleavage plane, then a random association of this plane with the blastomeres of the four embryo quadrants in the oral-aboral plane (viz. oral, aboral, right and left) would be expected. Lineage tracer dye injection into one blastomere at the 2-cell stage and observation of the resultant labeling patterns demonstrates instead a strongly nonrandom association. In at least ninety percent of cases, the progeny of the aboral blastomeres are associated with those of the left lateral blastomeres and the progeny of the oral blastomeres with the right lateral ones, respectively. Thus, ninety percent of the time the oral pole of the future oral-aboral axis lies 45 degrees clockwise from the first cleavage plane as viewed from the animal pole. The nonrandom association of blastomeres after labeling of the 2-cell stage implies that there is a mechanistic relation between axis specification and the positioning of the first cleavage plane

Macromere cell fates during sea urchin development

This paper examines the cell lineage relationships and cell fates in embryos of the sea urchin Strongylocentrotus purpuratus leading to the various cell types derived from the definitive vegetal plate territory or the veg_2 tier of cells. These cell types are gut, pigment cells, basal cells and coelomic pouches. They are cell types that constitute embryonic structures through cellular migration or rearrangement unlike the relatively non-motile ectoderm cell types. For this analysis, we use previous knowledge of lineage to assign macromeres to one of four types: VOM, the oral macromere; VAM, the aboral macromere, right and left VLM, the lateral macromeres. Each of the four macromeres contributes progeny to all of the cell types that descend from the definitive vegetal plate. Thus in the gut each macromere contributes to the esophagus, stomach and intestine, and the stripe of labeled cells descendant from a macromere reflects the re-arrangement of cells that occurs during archenteron elongation. Pigment cell contributions exhibit no consistent pattern among the four macromeres, and are haphazardly distributed throughout the ectoderm. Gut and pigment cell contributions are thus radially symmetrical. In contrast, the VOM blastomere contributes to both of the coelomic pouches while the other three macromeres contribute to only one or the other pouch. The total of the macromere contribution amounts to 60% of the cells constituting the coelomic pouches

Survival, transmission and control of Phoma koolunga in field pea seed and reaction of field pea genotypes to the pathogen

Little is known about the epidemiology of Phoma koolunga, a component of the ascochyta blight complex of field pea in southern Australia. The aims of this research were to investigate seed infection, efficacy of fungicides as seed dressings and the reaction of current field pea genotypes to this fungus. The frequency of isolation of P. koolunga from individual seed samples from South Australia, Victoria and Western Australia ranged from 0 to 6 %. Disease was transmitted to 98% of seedlings that emerged from artificially inoculated seeds (AIS) in growth room conditions. The necrotic index on seedlings that emerged from AIS at 8°C was greater than that for seedlings at 12, 16 and 20°C. P-Pickel T® and Jockey Stayer® were the most effective fungicides for reducing disease incidence and severity on seedlings emerged from AIS sown in soil and on germination paper, respectively. The response of 12 field pea genotypes to one isolate of P. koolunga was assessed by spraying plants with pycnidiospore suspension in controlled conditions and examining symptoms from 3 to 21 days post-inoculation (dpi). Genotypes Sturt, Morgan and Parafield showed more severe disease on the lowest three leaves than the other genotypes at 21 dpi. In another experiment, four genotypes of short, semi-leafless type field peas were inoculated with three isolates of P. koolunga which differed in virulence and assessed as described above. Kaspa showed significantly less disease than Morgan or WAPEA2211 at 21 dpi when inoculated with two of the three isolates tested. Isolates of P. koolunga differed in aggressiveness based on % leaf area diseased until 14 dpi, but differences were not significant at 21 dpi.M. Khani, J. A. Davidson, M. R. Sosnowski, E. S. Scot

Survival of Phoma koolunga, a causal agent of ascochyta blight, on field pea stubble or as pseudosclerotia in soil

Phoma koolunga is a recently recognized pathogen in the ascochyta blight complex of field pea (Pisum sativum). Unlike the other three ascochyta blight pathogens, survival of P. koolunga is poorly understood. Survival of this fungus was examined on field pea stubble and as pseudosclerotia on the surface of, and buried in, field soil. Pseudosclerotia were formed in plates containing potato dextrose agar (PDA) mixed with sand or amended with fluorocytocin. After 1 month, P. koolunga was recovered on amended PDA from 93% of stubble sections retrieved from the soil surface, 36% of buried stubble sections and 100% of pseudosclerotia buried in field soil, pasteurized or not. The frequency of recovery of P. koolunga decreased over time and the fungus was not recovered from stubble on the soil surface at 15 months, nor was it recovered from stubble buried in soil at 11 months or later, or from pseudosclerotia buried for 18 months. In a pot bioassay, most ascochyta blight lesions developed on plants inoculated with stubble retrieved from the soil surface after 1 month. Infectivity of the inoculum decreased over time. Disease on plants inoculated with stubble that had been buried or left on the soil surface for up to 6 and 5 months, respectively, and pseudosclerotia retrieved at 14 months and later from field soil did not differ from the non-inoculated control. These results suggest that field pea stubble may play a role in survival of P. koolunga, especially if it remains on the soil surface. In addition, pseudosclerotia were able to persist in soil and infect field pea plants into the next season.M. Khani, J. A. Davidson, M. R. Sosnowski and E. S. Scot

Functional effects of polymorphisms on glucocorticoid receptor modulation of human anxiogenic substance-P gene promoter activity in primary amygdala neurones

This work was funded by The BBSRC (BB/D004659/1) the Wellcome Trust (080980/Z/06/Z) and the Medical Research Council (G0701003). Colin Hay was funded by the Chief Scientist Office, Scotland. Scott Davidson was funded by a BBSRC strategic studentship (BBS/S/2005/12001). Philip Cowie was funded by the Scottish Universities Life Sciences Alliance (SULCA).Peer reviewedPublisher PD

The combustion of solid paraffin wax and of liquid glycerol in a fluidised bed

Two fuels were burned in electrically heated beds of alumina sand, fluidised by air. The fuels were: (i) paraffin wax, which is a solid containing 100% volatile matter and (ii) glycerol, a liquid, whose potential as a fuel needs assessing. The bubbling fluidised beds were held in the range 400–900 °C. Pieces of paraffin wax burned like a plastic, so when fed on top of a bed, the wax floated and generated clouds of soot. Soon, it then sank into the bed. When the sand was below ~800 °C, combustion occurred noisily in exploding bubbles leaving the bed. In beds hotter than ~800 °C, combustion proceeded in bubbles fairly low in the bed and was controlled by the mixing of hydrocarbon vapours (from the wax) with the fluidising air. If wax were fed half way up a bed, bubbles of hydrocarbon vapours were quickly produced; they ascended and mixed with the fluidising air. In a bed below 800 °C, combustion mainly occurred noisily in bubbles just after leaving the bed, but in a hotter bed, there was quieter burning in smaller bubbles, before they reached the top of the bed. Glycerol behaved similarly, when fed into the middle of a bed. Thus bubbles of glycerol vapour were formed; they mixed with air ascending the bed as either bubbles or percolating between particles. Again bubbles exploded noisily at the top of a bed below 800 °C. With the bed above 800 °C, glycerol burned inside smaller bubbles below the bed’s upper surface. No soot was observed when burning glycerol in such a hot bed, yielding CO and CO$_2$ as the only products of combustion. It appears that burning glycerol cleanly in a hot fluidised bed is a feasible proposition

Genomic characterization of Gli-activator targets in sonic hedgehog-mediated neural patterning

Sonic hedgehog (Shh) acts as a morphogen to mediate the specification of distinct cell identities in the ventral neural tube through a Gli-mediated (Gli1-3) transcriptional network. Identifying Gli targets in a systematic fashion is central to the understanding of the action of Shh. We examined this issue in differentiating neural progenitors in mouse. An epitope-tagged Gli-activator protein was used to directly isolate cis-regulatory sequences by chromatin immunoprecipitation (ChIP). ChIP products were then used to screen custom genomic tiling arrays of putative Hedgehog (Hh) targets predicted from transcriptional profiling studies, surveying 50-150 kb of non-transcribed sequence for each candidate. In addition to identifying expected Gli-target sites, the data predicted a number of unreported direct targets of Shh action. Transgenic analysis of binding regions in Nkx2.2, Nkx2.1 (Titf1) and Rab34 established these as direct Hh targets. These data also facilitated the generation of an algorithm that improved in silico predictions of Hh target genes. Together, these approaches provide significant new insights into both tissue-specific and general transcriptional targets in a crucial Shh-mediated patterning process