381 research outputs found

    A plate-based assay system for analyses and screening of the Leishmania major inositol phosphorylceramide synthase

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    Sphingolipids are key components of eukaryotic membranes, particularly the plasma membrane. The biosynthetic pathway for the formation of these lipid species is largely conserved. However, in contrast to mammals, which produce sphingomyelin, organisms such as the pathogenic fungi and protozoa synthesize inositol phosphorylceramide (IPC) as the primary phosphosphingolipid. The key step involves the reaction of ceramide and phosphatidylinositol catalysed by IPC synthase, an essential enzyme with no mammalian equivalent encoded by the AUR1 gene in yeast and recently identified functional orthologues in the pathogenic kinetoplastid protozoa. As such this enzyme represents a promising target for novel anti-fungal and anti-protozoal drugs. Given the paucity of effective treatments for kinetoplastid diseases such as leishmaniasis, there is a need to characterize the protozoan enzyme. To this end a fluorescent-based cell-free assay protocol in a 96-well plate format has been established for the Leishmania major IPC synthase. Using this system the kinetic parameters of the enzyme have been determined as obeying the double displacement model with apparent Vmax = 2.31 pmol min−1 U−1. Furthermore, inhibitory substrate analogues have been identified. Importantly this assay is amenable to development for use in high-throughput screening applications for lead inhibitors and as such may prove to be a pivotal tool in drug discovery

    Instability of vortex array and transitions to turbulent states in rotating helium II

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    We consider superfluid helium inside a container which rotates at constant angular velocity and investigate numerically the stability of the array of quantized vortices in the presence of an imposed axial counterflow. This problem was studied experimentally by Swanson {\it et al.}, who reported evidence of instabilities at increasing axial flow but were not able to explain their nature. We find that Kelvin waves on individual vortices become unstable and grow in amplitude, until the amplitude of the waves becomes large enough that vortex reconnections take place and the vortex array is destabilized. The eventual nonlinear saturation of the instability consists of a turbulent tangle of quantized vortices which is strongly polarized. The computed results compare well with the experiments. Finally we suggest a theoretical explanation for the second instability which was observed at higher values of the axial flow

    Massive quark propagator and competition between chiral and diquark condensate

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    The Green-function approach has been extended to the moderate baryon density region in the framework of an extended Nambu--Jona-Lasinio model, and the thermodynamic potential with both chiral and diquark condensates has been evaluated by using the massive quark propagator. The phase structure along the chemical potential direction has been investigated and the strong competition between the chiral and diquark condensate has been analyzed by investigating the influence of the diquark condensate on the sharp Fermi surface. The influence of the diquark condensate on the quark properties has been investigated, even though the quarks in the color breaking phase are very different from that in the chiral breaking phase, the difference between quarks in different colors is very small.Comment: Revtex, 34 pages, 7 figures, section V revised, accepted by PR

    A statistical interpretation of the correlation between intermediate mass fragment multiplicity and transverse energy

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    Multifragment emission following Xe+Au collisions at 30, 40, 50 and 60 AMeV has been studied with multidetector systems covering nearly 4-pi in solid angle. The correlations of both the intermediate mass fragment and light charged particle multiplicities with the transverse energy are explored. A comparison is made with results from a similar system, Xe+Bi at 28 AMeV. The experimental trends are compared to statistical model predictions.Comment: 7 pages, submitted to Phys. Rev.

    The Influence of an External Chromomagnetic Field on Color Superconductivity

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    We study the competition of quark-antiquark and diquark condensates under the influence of an external chromomagnetic field modelling the gluon condensate and in dependence on the chemical potential and temperature. As our results indicate, an external chromomagnetic field might produce remarkable qualitative changes in the picture of the color superconducting (CSC) phase formation. This concerns, in particular, the possibility of a transition to the CSC phase and diquark condensation at finite temperature.Comment: 27 pages, RevTex, 8 figures; the version accepted for the publication in PRD (few references added; new numerical results added; main conclusions are not changed

    Light propagation in statistically homogeneous and isotropic universes with general matter content

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    We derive the relationship of the redshift and the angular diameter distance to the average expansion rate for universes which are statistically homogeneous and isotropic and where the distribution evolves slowly, but which have otherwise arbitrary geometry and matter content. The relevant average expansion rate is selected by the observable redshift and the assumed symmetry properties of the spacetime. We show why light deflection and shear remain small. We write down the evolution equations for the average expansion rate and discuss the validity of the dust approximation.Comment: 42 pages, no figures. v2: Corrected one detail about the angular diameter distance and two typos. No change in result

    The Fueling and Evolution of AGN: Internal and External Triggers

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    In this chapter, I review the fueling and evolution of active galactic nuclei (AGN) under the influence of internal and external triggers, namely intrinsic properties of host galaxies (morphological or Hubble type, color, presence of bars and other non-axisymmetric features, etc) and external factors such as environment and interactions. The most daunting challenge in fueling AGN is arguably the angular momentum problem as even matter located at a radius of a few hundred pc must lose more than 99.99 % of its specific angular momentum before it is fit for consumption by a BH. I review mass accretion rates, angular momentum requirements, the effectiveness of different fueling mechanisms, and the growth and mass density of black BHs at different epochs. I discuss connections between the nuclear and larger-scale properties of AGN, both locally and at intermediate redshifts, outlining some recent results from the GEMS and GOODS HST surveys.Comment: Invited Review Chapter to appear in LNP Volume on "AGN Physics on All Scales", Chapter 6, in press. 40 pages, 12 figures. Typo in Eq 5 correcte
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