Expectation Maximization for Hard X-ray Count Modulation Profiles

This paper is concerned with the image reconstruction problem when the measured data are solar hard X-ray modulation profiles obtained from the Reuven Ramaty High Energy Solar Spectroscopic Imager (RHESSI)} instrument. Our goal is to demonstrate that a statistical iterative method classically applied to the image deconvolution problem is very effective when utilized for the analysis of count modulation profiles in solar hard X-ray imaging based on Rotating Modulation Collimators. The algorithm described in this paper solves the maximum likelihood problem iteratively and encoding a positivity constraint into the iterative optimization scheme. The result is therefore a classical Expectation Maximization method this time applied not to an image deconvolution problem but to image reconstruction from count modulation profiles. The technical reason that makes our implementation particularly effective in this application is the use of a very reliable stopping rule which is able to regularize the solution providing, at the same time, a very satisfactory Cash-statistic (C-statistic). The method is applied to both reproduce synthetic flaring configurations and reconstruct images from experimental data corresponding to three real events. In this second case, the performance of Expectation Maximization, when compared to Pixon image reconstruction, shows a comparable accuracy and a notably reduced computational burden; when compared to CLEAN, shows a better fidelity with respect to the measurements with a comparable computational effectiveness. If optimally stopped, Expectation Maximization represents a very reliable method for image reconstruction in the RHESSI context when count modulation profiles are used as input data

Independent counsel: Process and policy

Independent Counsel: Process and Policy examines the Office of the Independent Counsel, established by the Ethics in Government Act of 1978. It discusses the history of the Act, its implementation, and its application. Although there is a need for independent investigation of high-level government officials, the Act suffers from major defects which damage its credibility in accomplishing the goals Congress set with its passage. Independent Counsel: Process and Policy suggests changes to the Act which will increase the efficiency and fairness of the office, and encourage efforts to eradicate the public\u27s perception of the independent counsel as a renegade

Inverse diffraction for the Atmospheric Imaging Assembly in the Solar Dynamics Observatory

The Atmospheric Imaging Assembly in the Solar Dynamics Observatory provides full Sun images every 1 seconds in each of 7 Extreme Ultraviolet passbands. However, for a significant amount of these images, saturation affects their most intense core, preventing scientists from a full exploitation of their physical meaning. In this paper we describe a mathematical and automatic procedure for the recovery of information in the primary saturation region based on a correlation/inversion analysis of the diffraction pattern associated to the telescope observations. Further, we suggest an interpolation-based method for determining the image background that allows the recovery of information also in the region of secondary saturation (blooming)

Population Dynamics of Endangered Iresine Rhizomatosa (Juda’s Bush)

Population changes of Iresine rhizomatosa Standl. (Juda’s bush, bloodleaf: Amaranthaceae) a State listed (Endangered in Illinois and Maryland, Rare in Indiana) perennial bush of floodplain forests is reported. The size/stage class distribution of I. rhizomatosa plants in Beall Woods and Robeson Hills, Illinois was determined to assess the proportional representation of individuals of different sizes, and monitor fecundity. One hundred randomly located individuals were tagged in each population in March 2012 and monitored for two years. Seedling emergence was monitored from fall 2012 through spring 2013. The number of flowering spikes, and numbers of seed produced were monitored on randomly selected adult plants in fall 2012. Survivorship of seedlings was low (\u3c 50%), re-growth of plants was poor, and seeds had low viability (8-12%) and germination rate (\u3c 1%); all features consistent with the rare status of this state-endangered plant. As a perennial, this plant is buffered to some extent against periods of poor recruitment, but populations would be at risk if these coincided with periods of high adult mortality

Appendices: A comparative study of the population dynamics of four Amaranthaceae species

Appendices for Lauren Schwartz\u27s dissertation entitled A Comparative Study of the Population Dynamics of Four Amaranthaceae Species

A comparative study of the population dynamics of four Amaranthaceae species

Some of the most problematic agricultural weeds found in the Midwest United States are found in the Amaranthaceae family, such as Amaranthus palmeri and A. tuberculatus. These summer annual weeds are troublesome due to their competitive ability, high seed production, and resistance to herbicides from several modes of action which complicates management in field crops and has led to significant yield loss. Achyranthes japonica and Iresine rhizomatosa are two perennial species in the same family as A. palmeri and A. tuberculatus that occur in similar habitats as one another, but differ in invasiveness. Achyranthes japonica is a non-native, invasive species that is becoming a threat to forested areas and has been observed along agricultural field margins. Iresine rhizomatosa also occurs in forest habitats but is an endangered species in Illinois. This research seeks to determine the comparative life history and relative competitiveness of closely related weedy species when challenged with a dominant species. Specifically, select, closely related weedy species in the Amaranthaceae plant family that occur in southern Illinois were compared, i.e., Achyranthes japonica, Amaranthus palmeri, Amaranthus tuberculatus, and Iresine rhizomatosa. The first study examined the life history characteristics of A. japonica in regards to survivorship, growth and fecundity at two sites in southern Illinois (Chapter 2). Achyranthes japonica is a relatively new invasive species that has been poorly studied. This experiment showed that regardless of site, environmental factors had a significant effect on seedling emergence and seed viability, which decreased from 2012 to 2013 during a drought year and rebounded from 2013 to 2014 following flooding. On average, individuals at the driest site had higher performance and fecundity, regardless of year. The second experiment tested the relative competitive effect and response of the Amaranthaceae species to Glycine max, first in a greenhouse study that tested shading and nitrogen resource drawdown for each species, and second in a controlled field experiment that tested intraspecific competition (Chapter 3). In addition, A. japonica seedlings were planted as either unmanipulated seedlings (uncut A. japonica) or as a seedling cut back to the soil surface at the four-node stage (cut A. japonica) at which point seedlings have reached a perennial growth stage. The greenhouse experiment showed that the four species each drew down light significantly, but not nitrogen. Shading decreased the aboveground biomass of the species in comparison to unshaded controls. Supplemental nitrogen, however, increased the aboveground biomass of A. palmeri and A. japonica. The supporting controlled field experiment showed that the competitive response of the weed species to the presence of G. max showed a reduction in height compared to the weed species grown in monocultures. Glycine max and the weed species, except I. rhizomatosa, showed a similar competitive effect and response when aboveground biomass was measured. Achyranthes japonica attained the highest belowground biomass when grown as a monoculture and in the presence of G. max. A competitive effect ranking was determined to be A. palmeri \u3e A. tuberculatus \u3e cut A. japonica = uncut A. japonica = I. rhizomatosa with the competitive response ranking being the inverse. The third study implemented an integral projection model (IPM) to determine the population growth rate of each species and how they compared to one another (Chapter 4). This experiment showed that A. palmeri, A. tuberculatus and A. japonica each had a population growth rate greater than one indicating rapidly growing populations. By contrast, I. rhizomatosa had a population growth rate less than one indicating a declining population. The results suggest that A. japonica has not yet shown the ability to escape management strategies in agricultural fields implemented by farmers, but it is still an aggressive invasive species that farmers and land owners need to be able to identify. This species has many similar characteristics to the Amaranthus species, such as the ability to colonize in areas with limiting resources, continual flushes of germination throughout the growing season, the ability to outcompete other weed species, and high fecundity but, A. japonica also is a perennial species that can withstand removal of shoot material and has a high germination rate. Based on these results, only early detection and rapid response methods should be relied on to keep these species out of areas in and around agricultural fields. Iresine rhizomatosa’s performance in these studies was consistent with its rarity

The competitive response of Panicum virgatum cultivars to non-native invasive species in southern Illinois

Historically, the tallgrass prairie (TGP) was the largest ecosystem in North America, but today only about 10-15% of the original extent exists today. Some areas have experienced more extreme loss, for example in the state of Illinois less than 0.01% of high-quality native tallgrass prairie remains. Non-native invasive species are a recent phenomenon that threatens the integrity of surviving TGP communities. Ecotypes of dominant C4 grasses are the basis of numerous cultivars, many of which are utilized in prairie restorations. In this study, the effects of three invasive species (Bromus inermis, Schedonorus phoenix, and Poa pratensis) on two lowland (`Alamo\u27 and `Kanlow\u27) and three upland (`Blackwell\u27, `Cave in Rock\u27, and `Trailblazer\u27) cultivars of the dominant C4 grass Panicum virgatum were tested. Two simple pair-wise greenhouse experiments were established in which cultivars were sown as a monoculture or as a mixture of the cultivars with one of three invasive species. Pots were subjected to one of two water treatments with three replicates of each treatment combination. Response variables (height, number of leaves, tiller density, and biomass) and resources (soil moisture, soil pH, soil electrical conductivity, and light intensity) were measured. The greenhouse studies showed that response variables were affected by the presence of invasive species and that the time of growth affected resource levels. Resources are allocated to different areas (i.e growth and reproduction) when competition and stress are implemented on the dominant species. This study was the first to experimentally test for the presence of the physiological stress marker, trigonelline, in a prairie grass. Trigonelline was highest in upland cultivars under low moisture and highest in lowland cultivars under low moisture treatments. The results of these greenhouse studies suggest that invasive species may differentially affect cultivars of Panicum virgatum that may be sown in a prairie restoration. Performance of the P. virgatum cultivars was dependent on the timing of growth, the pot size, the invasive species, as well as soil moisture level. Therefore, when choosing a cultivar source for restoration, resources (i.e. soil moisture) should be looked into to maximize the output of the cultivar

Deciphering top flavor violation at the LHC with B factories

The LHC will have unprecedented sensitivity to flavor-changing neutral current (FCNC) top quark decays, whose observation would be a clear sign of physics beyond the standard model. Although many details of top flavor violation are model dependent, the standard model gauge symmetries relate top FCNCs to other processes, which are strongly constrained by existing data. We study these constraints in a model independent way, using a low energy effective theory from which the new physics is integrated out. We consider the most important operators which contribute to top FCNCs and analyze the current constraints on them. We find that the data rule out top FCNCs at a level observable at the LHC due to most of the operators comprising left-handed first or second generation quark fields, while there remains a substantial window for top decays mediated by operators with right-handed charm or up quarks. If FCNC top decays are observed at the LHC, such an analysis may help decipher the underlying physics.Comment: 17 pages, 5 figures; some typos correcte