Sequence-specific double-strand cleavage of DNA by penta-N-methylpyrrolecarboxamide-EDTA·Fe(II)

In the presence of O2 and 5 mM dithiothreitol, penta-N-methylpyrrolecarboxamide-EDTA·Fe(II) [P5E·Fe(II)] at 0.5 µ M cleaves pBR322 plasmid DNA (50 µ M in base pairs) on opposite strands to afford discrete DNA fragments as analyzed by agarose gel electrophoresis. High-resolution denaturing gel electrophoresis of a 32P-end-labeled 517-base-pair restriction fragment containing a major cleavage site reveals that P5E·Fe(II) cleaves 3-5 base pairs contiguous to a 6-base-pair sequence, 5'-T-T-T-T-T-A-3' (4,323-4,328 base pairs). The major binding orientation of the pentapeptide occurs with the amino terminus at the adenine side of this sequence. In the presence of 5 mM dithiothreitol, 0.01 µ M P5E·Fe(II) converts form I pBR322 DNA at 0.22 µ M plasmid (1.0 mM in base pairs) to 40% form II, indicating the cleavage reaction is catalytic, turning over a minimum of nine times. This synthetic molecule achieves double-strand cleavage of DNA (pH 7.9, 25 degrees C) at the 6-base-pair recognition level and may provide an approach to the design of "artificial restriction enzymes.

Flame tube parametric studies for control of fuel bound nitrogen using rich-lean two-stage combustion

An experimental parametric study of rich-lean two-stage combustion in a flame tube is described and approaches for minimizing the conversion of fuel-bound nitrogen to nitrogen oxides in a premixed, homogeneous combustion system are evaluated. Air at 672 K and 0.48 MPa was premixed with fuel blends of propane, toluene, and pyridine at primary equivalence ratios ranging from 0.5 to 2.0 and secondary equivalence ratios of 0.5 to 0.7. Distillates of SRC-II, a coal syncrude, were also tested. The blended fuels were proportioned to vary fuel hydrogen composition from 9.0 to 18.3 weight percent and fuel nitrogen composition from zero to 1.5 weight percent. Rich-lean combustion proved effective in reducing fuel nitrogen to NO sub x conversion; conversion rates up to 10 times lower than those normally produced by single-stage combustion were achieved. The optimum primary equivalence ratio, where the least NO sub x was produced and combustion efficiency was acceptable, shifted between 1.4 and 1.7 with changes in fuel nitrogen content and fuel hydrogen content. Increasing levels of fuel nitrogen content lowered the conversion rate, but not enough to avoid higher NO sub x emissions as fuel nitrogen increased

Computation of regions of constrained stability for nonlinear control systems

Computation of regions of constrained stability for nonlinear control system

The Chirality operators for Heisenberg Spin Systems

The ground state of closed Heisenberg spin chains with an odd number of sites has a chiral degeneracy, in addition to a two-fold Kramers degeneracy. A non-zero chirality implies that the spins are not coplanar, and is a measure of handedness. The chirality operator, which can be treated as a spin-1/2 operator, is explicitly constructed in terms of the spin operators, and is given as commutator of Permutation operators.Comment: 7 pages, report IC/94/23. E-mail: [email protected]

On-line digital computer control of the NERVA nuclear rocket engine

The problem of on-line digital computer control of the NERVA nuclear rocket engine is considered. Proposed is a method of State Dependent State Variable Feedback (SDSVF) as a practical approach to the control of NERVA and other complex nonlinear and/or time-varying systems. The difficulties inherent in other design methods are avoided by defining the optimal closed loop system in terms of a desired transfer function, rather than a performance index to maximize or minimize

Mysterious iodine-overabundance in Antarctic meteorites

Halogen as well as other trace element concentrations in meteorite finds can be influenced by alteration processes on the Earth's surface. The discovery of Antarctic meteorites offered the opportunity to study meteorites which were kept in one of the most sterile environment of the Earth. Halogen determination in Antartic meteorites was compared with non-Antarctic meteorites. No correlation was found between iodine concentration and the weathering index, or terrestrial age. The halogen measurements indicate a contaminating phase rich in iodine and also containing chlorine. Possible sources for this contamination are discussed