Molecular diversity among wild relatives of Cajanus cajan (L.) Millsp.

The wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.] are important source of genetic variation carrying genes for resistance to various biotic and abiotic stresses and other morphological traits. In the present study, four wild relatives of pigeonpea were evaluated using 24 simple sequence repeat (SSR) markers to assess their genetic diversity at molecular level. Each marker, on average, amplified 3.3 alleles with polymorphic information content (PIC) value of 0.53. The dendrogram pattern revealed two distinct genotypic clusters and cultivated pigeonpea was closely related to Cajanus cajanifolius. On the contrary, Cajanus scarabaeoides was the most diverse from the cultivated type. The results also suggest that genetic distance between cultivated pigeonpea and wild species was not related to their hybridization barrier.Keywords: Cajanus, crossability, genetic diversity, simple sequence repeat markers, wild relativesAfrican Journal of Biotechnology Vol. 12(24), pp. 3797-380

An Alternative Method for Solving a Certain Class of Fractional Kinetic Equations

An alternative method for solving the fractional kinetic equations solved earlier by Haubold and Mathai (2000) and Saxena et al. (2002, 2004a, 2004b) is recently given by Saxena and Kalla (2007). This method can also be applied in solving more general fractional kinetic equations than the ones solved by the aforesaid authors. In view of the usefulness and importance of the kinetic equation in certain physical problems governing reaction-diffusion in complex systems and anomalous diffusion, the authors present an alternative simple method for deriving the solution of the generalized forms of the fractional kinetic equations solved by the aforesaid authors and Nonnenmacher and Metzler (1995). The method depends on the use of the Riemann-Liouville fractional calculus operators. It has been shown by the application of Riemann-Liouville fractional integral operator and its interesting properties, that the solution of the given fractional kinetic equation can be obtained in a straight-forward manner. This method does not make use of the Laplace transform.Comment: 7 pages, LaTe

Botanical Description of Pigeonpea [Cajanus Cajan (L.) Millsp.]

Pigeonpea [Cajanus cajan (L.) Millspaugh] is an important legume crop of the papilionaceae family. It is an often cross-pollinated crop, and breeding principles of both self and cross-pollinated crops are highly effective in its genetic enhancement. Pigeonpea is a hard woody shrub, extensively adaptable to a range of soil types, temperature, and rainfall. It has a deep taproot system extending up to two meters and can grow to a height of four meters. Pigeonpea roots form a symbiotic association with Brady rhizobium spp. and perform biological nitrogen fixation. The branching pattern of stem may vary from bush type to compact upright type and is of determinate, semi-determinate, and non-determinate type based on the flowering pattern. The primary leaves are simple, opposite, and caduceus, while the latter ones are pinnately trifoliate with lanceolate to elliptical leaflets. Pigeonpea flowers are zygomorphic, borne on terminal or auxiliary racemes and are normally yellow in color with some variations. It has ten stamens in diadelphous condition with light or dark yellow anthers. The ovary is superior with a long style attached to a thickened, incurved, and swollen stigma. Pigeonpea is an often cross-pollinated crop with an average of 20% cross-pollination. The fruit of pigeonpea is called pod, which is of various colors, with and without deep constrictions. Seeds (with 20–22% proteins and amino acids) can be round or lens shaped, in shades of white and brown color with yellow color cotyledon. Pigeonpea is a widely consumed multi-utility pulse crop, thus the knowledge about the crop botany is vital for modifying it according to future challenges and goals

Genetic Patterns of Domestication in Pigeonpea (Cajanus cajan (L.) Millsp.) and Wild Cajanus Relatives

Pigeonpea (Cajanus cajan) is an annual or short-lived perennial food legume of acute regional importance, providing significant protein to the human diet in less developed regions of Asia and Africa. Due to its narrow genetic base, pigeonpea improvement is increasingly reliant on introgression of valuable traits from wild forms, a practice that would benefit from knowledge of its domestication history and relationships to wild species. Here we use 752 single nucleotide polymorphisms (SNPs) derived from 670 low copy orthologous genes to clarify the evolutionary history of pigeonpea (79 accessions) and its wild relatives (31 accessions). We identified three well-supported lineages that are geographically clustered and congruent with previous nuclear and plastid sequence-based phylogenies. Among all species analyzed Cajanus cajanifolius is the most probable progenitor of cultivated pigeonpea. Multiple lines of evidence suggest recent gene flow between cultivated and non-cultivated forms, as well as historical gene flow between diverged but sympatric species. Evidence supports that primary domestication occurred in India, with a second and more recent nested population bottleneck focused in tropical regions that is the likely consequence of pigeonpea breeding. We find abundant allelic variation and genetic diversity among the wild relatives, with the exception of wild species from Australia for which we report a third bottleneck unrelated to domestication within India. Domesticated C. cajan possess 75% less allelic diversity than the progenitor clade of wild Indian species, indicating a severe “domestication bottleneck” during pigeonpea domestication

Pigeonpea

Pigeonpea was labeled as an orphan crop but is now a trendy and pacesetter, with ample genetic and genomic information becoming available in recent times. It is now possible to cross wild relatives not only from the Cajanus group placed in the secondary and tertiary gene pool but also the related genera placed in the quaternary gene pool. This is no small achievement for a legume which is an important crop of Asia and Africa and plays a major role in the diet of majority of the people of this region. The need of the hour is further committed research on wide crosses in pigeonpea

Modulation of phosphofructokinase (PFK) from Setaria cervi, a bovine filarial parasite, by different effectors and its interaction with some antifilarials

<p>Abstract</p> <p>Background</p> <p>Phosphofructokinase (ATP: D-fructose-6-phosphate-1-phosphotransferase, EC 2.7.1.11, PFK) is of primary importance in the regulation of glycolytic flux. This enzyme has been extensively studied from mammalian sources but relatively less attention has been paid towards its characterization from filarial parasites. Furthermore, the information about the response of filarial PFK towards the anthelmintics/antifilarial compounds is lacking. In view of these facts, PFK from <it>Setaria cervi</it>, a bovine filarial parasite having similarity with that of human filarial worms, was isolated, purified and characterized.</p> <p>Results</p> <p>The <it>S. cervi </it>PFK was cytosolic in nature. The adult parasites (both female and male) contained more enzyme activity than the microfilarial (Mf) stage of <it>S. cervi</it>, which exhibited only 20% of total activity. The <it>S. cervi </it>PFK could be modulated by different nucleotides and the response of enzyme to these nucleotides was dependent on the concentrations of substrates (F-6-P and ATP). The enzyme possessed wide specificity towards utilization of the nucleotides as phosphate group donors. <it>S. cervi </it>PFK showed the presence of thiol group(s) at the active site of the enzyme, which could be protected from inhibitory action of para-chloromercuribenzoate (p-CMB) up to about 76% by pretreatment with cysteine or β-ME. The sensitivity of PFK from <it>S. cervi </it>towards antifilarials/anthelmintics was comparatively higher than that of mammalian PFK. With suramin, the Ki value for rat liver PFK was 40 times higher than PFK from <it>S. cervi</it>.</p> <p>Conclusions</p> <p>The results indicate that the activity of filarial PFK may be modified by different effectors (such as nucleotides, thiol group reactants and anthelmintics) in filarial worms depending on the presence of varying concentrations of substrates (F-6-P and ATP) in the cellular milieu. It may possess thiol group at its active site responsible for catalysis. Relatively, 40 times higher sensitivity of filarial PFK towards suramin as compared to the analogous enzyme from the mammalian system indicates that this enzyme could be exploited as a potential chemotherapeutic target against filariasis.</p

A Soluble Acetylcholinesterase Provides Chemical Defense against Xenobiotics in the Pinewood Nematode

The pinewood nematode genome encodes at least three distinct acetylcholinesterases (AChEs). To understand physiological roles of the three pinewood nematode AChEs (BxACE-1, BxACE-2, and BxACE-3), BxACE-3 in particular, their tissue distribution and inhibition profiles were investigated. Immunohistochemistry revealed that BxACE-1 and BxACE-2 were distributed in neuronal tissues. In contrast, BxACE-3 was detected from some specific tissues and extracted without the aid of detergent, suggesting its soluble nature unlike BxACE-1 and BxACE-2. When present together, BxAChE3 significantly reduced the inhibition of BxACE-1 and BxACE-2 by cholinesterase inhibitors. Knockdown of BxACE-3 by RNA interference significantly increased the toxicity of three nematicidal compounds, supporting the protective role of BxACE-3 against chemicals. In summary, BxACE-3 appears to have a non-neuronal function of chemical defense whereas both BxACE-1 and BxACE-2 have classical neuronal function of synaptic transmission