A chemically driven fluctuating ratchet model for actomyosin interaction

With reference to the experimental observations by T. Yanagida and his co-workers on actomyosin interaction, a Brownian motor of fluctuating ratchet kind is designed with the aim to describe the interaction between a Myosin II head and a neighboring actin filament. Our motor combines the dynamics of the myosin head with a chemical external system related to the ATP cycle, whose role is to provide the energy supply necessary to bias the motion. Analytical expressions for the duration of the ATP cycle, for the Gibbs free energy and for the net displacement of the myosin head are obtained. Finally, by exploiting a method due to Sekimoto (1997, J. Phys. Soc. Jpn., 66, 1234), a formula is worked out for the amount of energy consumed during the ATP cycle.Comment: 15 pages. 1 figur

NMR relaxation rate in the field-induced octupolar liquid phase of spin-1/2 J1-J2 frustrated chains

In the spin-1/2 frustrated chain with nearest-neighbor ferromagnetic exchange J1 and next-nearest-neighbor antiferromagnetic exchange J2 under magnetic field, magnetic multipolar-liquid (quadrupolar, octupolar, and hexadecapolar) phases are widely expanded from the saturation down to a low-field regime. Recently, we have clarified characteristic temperature and field dependence of the NMR relaxation rate 1/T_1 in the quadrupolar phase. In this paper, we examine those of 1/T_1 in the octupolar phase combining field theoretical method with numerical data. The relevance of the results to quasi one-dimensional J1-J2 magnets such as PbCuSO4(OH)2, Rb2Cu2Mo3O12 and Li2ZrCuO4 is shortly discussed.Comment: 6 pages (1 column), 3 figure

A human colonic crypt culture system to study regulation of stem cell-driven tissue renewal and physiological function

The intestinal epithelium is one of the most rapidly renewing tissues in the human body and fulfils vital physiological roles such as barrier function and transport of nutrients and fluid. Investigation of gut epithelial physiology in health and disease has been hampered by the lack of ex vivo models of the native human intestinal epithelium. Recently, remarkable progress has been made in defining intestinal stem cells and in generating intestinal organoid cultures. In parallel, we have developed a 3D culture system of the native human colonic epithelium that recapitulates the topological hierarchy of stem cell-driven tissue renewal and permits the physiological study of native polarized epithelial cells. Here we describe methods to establish 3D cultures of intact human colonic crypts and conduct real-time imaging of intestinal tissue renewal, cellular signalling, and physiological function, in conjunction with manipulation of gene expression by lentiviral or adenoviral transduction. Visualization of mRNA- and protein-expression patterns in cultured human colonic crypts, and cross-validation with crypts derived from fixed mucosal biopsies, is also described. Alongside studies using intestinal organoids, the near-native human colonic crypt culture model will help to bridge the gap that exists between investigation of colon cancer cell lines and/or animal (tissue) studies, and progression to clinical trials. To this end, the near native human colonic crypt model provides a platform to aid the development of novel strategies for the prevention of inflammatory bowel disease and cancer

Dynamical Coupled-Channels Effects on Pion Photoproduction

The electromagnetic pion production reactions are investigated within the dynamical coupled-channels model developed in {\bf Physics Reports, 439, 193 (2007)}. The meson-baryon channels included in this study are $\gamma N$, $\pi N$, $\eta N$, and the $\pi\Delta$, $\rho N$ and $\sigma N$ resonant components of the $\pi\pi N$ channel. With the hadronic parameters of the model determined in a recent study of $\pi N$ scattering, we show that the pion photoproduction data up to the second resonance region can be described to a very large extent by only adjusting the bare $\gamma N \to N^*$ helicity amplitudes, while the non-resonant electromagnetic couplings are taken from previous works. It is found that the coupled-channels effects can contribute about 10 - 20 % of the production cross sections in the $\Delta$ (1232) resonance region, and can drastically change the magnitude and shape of the cross sections in the second resonance region. The importance of the off-shell effects in a dynamical approach is also demonstrated. The meson cloud effects as well as the coupled-channels contributions to the $\gamma N \to N^*$ form factors are found to be mainly in the low $Q^2$ region. For the magnetic M1 $\gamma N \to \Delta$ (1232) form factor, the results are close to that of the Sato-Lee Model. Necessary improvements to the model and future developments are discussed.Comment: Corrected version. 14 pages, 10 figure

Nonlocal Landau theory of the magnetic phase diagram of highly frustrated magnetoelectric CuFeO2_2

A nonlocal Landau-type free energy functional of the spin density is developed to model the large variety of magnetic states which occur in the magnetic field-temperature phase diagram of magnetoelectric CuFeO$_2$. Competition among long-range quadratic exchange, biquadratic anti-symmetric exchange, and trigonal anisotropy terms, consistent with the high-temperature rhombohedral R$\bar{3}$m crystal symmetry, are shown to all play important roles in stabilizing the unusual combination of commensurate and incommensurate spin structures in this highly frustrated triangular antiferromagnet. It is argued that strong magnetoelastic coupling is largely responsible for the nonlocal nature of the free energy. A key feature of the analysis is that an electric polarization is induced by a canting of the non-collinear incommensurate spin structure. Application of the model to ordered spin states in the triangular antiferromagnets MnBr$_2$ and NaFeO$_2$ is also discussed.Comment: 20 pages, 2 figure