Verification and validation of the high-performance Lorentz-Orbit Code for Use in Stellarators and Tokamaks (LOCUST)

| openaire: EC/H2020/633053/EU//EUROfusionA novel high-performance computing algorithm, developed in response to the next generation of computational challenges associated with burning plasma regimes in ITER-scale tokamak devices, has been tested and is described herein. The Lorentz-orbit code for use in stellarators and tokamaks (LOCUST) is designed for computationally scalable modelling of fast-ion dynamics, in the presence of detailed first wall geometries and fine 3D magnetic field structures. It achieves this through multiple levels of single instruction, multiple thread parallelism and by leveraging general-purpose graphics processing units. This enables LOCUST to rapidly track the full-orbit trajectories of kinetic Monte Carlo markers to deliver high-resolution fast-ion distribution functions and plasma-facing component power loads. LOCUST has been tested against the prominent NUBEAM and ASCOT fast-ion codes. All codes were compared for collisional plasmas in both high and low-aspect ratio toroidal geometries, with full-orbit and guiding-centre tracking. LOCUST produces statistically consistent results in line with acceptable theoretical and Monte Carlo uncertainties. Synthetic fast-ion D-α diagnostics produced by LOCUST are also compared to experiment using FIDASIM and show good agreement.Peer reviewe

Mammillary body injury in neonatal encephalopathy: a multicentre, retrospective study

Background The mammillary bodies (MBs) have repeatedly been shown to be critical for memory, yet little is known about their involvement in numerous neurological conditions linked to memory impairments, including neonatal encephalopathy. Methods We implemented a multicentre retrospective study, assessing magnetic resonance scans of 219 infants with neonatal encephalopathy who had undergone hypothermia treatment in neonatal intensive care units located in the Netherlands and Italy. Results Abnormal MB signal was observed in similar to 40% of infants scanned; in half of these cases, the brain appeared otherwise normal. MB involvement was not related to the severity of encephalopathy or the pattern/severity of hypoxic-ischaemic brain injury. Follow-up scans were available for 18 cases with abnormal MB signal; in eight of these cases, the MBs appeared severely atrophic. Conclusions This study highlights the importance of assessing the status of the MBs in neonatal encephalopathy; this may require changes to scanning protocols to ensure that the slices are sufficiently thin to capture the MBs. Furthermore, long-term follow-up of infants with abnormal MB signal is needed to determine the effects on cognition, which may enable the use of early intervention strategies. Further research is needed to assess the role of therapeutic hypothermia in MB involvement in neonatal encephalopathy. ImpactThe MBs are particularly sensitive to hypoxia in neonates. Current hypothermia treatment provides incomplete protection against MB injury. MB involvement is likely overlooked as it can often occur when the rest of the brain appears normal. Given the importance of the MBs for memory, it is necessary that this region is properly assessed in neonatal encephalopathy. This may require improvements in scanning protocols.Developmen

Using idiothetic cues to swim a path with a fixed trajectory and distance: Necessary involvement of the hippocampus but not the retrosplenial cortex.

Rats rapidly learned to find a submerged platform in a water maze at a constant distance and angle from the start point, which changed on every trial. The rats performed accurately in the light and dark, but prior rotation disrupted the latter condition. The rats were then retested after receiving cytotoxic hippocampal or retrosplenial cortex lesions. Retrosplenial lesions had no apparent effect in either the light or dark. Hippocampal lesions impaired performance in both conditions but spared the ability to locate a platform placed in the center of the pool. A hippocampal deficit emerged when this pool-center task was run in the dark. The spatial effects of hippocampal damage extend beyond allocentric tasks to include aspects of idiothetic guidance