29 research outputs found

    Gene expression profile of epithelial cells and mesenchymal cells derived from limbal explant culture

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    Purpose: Limbal stem cell deficiency is a challenging clinical problem and the current treatment involves replenishing the depleted limbal stem cell (LSC) pool by either limbal tissue transplantation or use of cultivated limbal epithelial cells (LEC). Our experience of cultivating the LEC on denuded human amniotic membrane using a feeder cell free method, led to identification of mesenchymal cells of limbus (MC-L), which showed phenotypic resemblance to bone marrow derived mesenchymal stem cells (MSC-BM). To understand the transcriptional profile of these cells, microarray experiments were carried out.Methods: RNA was isolated from cultured LEC, MC-L and MSC-BM and microarray experiments were carried out by using Agilent chip (4x44 k). The microarray data was validated by using Realtime and semiquntitative reverse transcription polymerase chain reaction. Results: The microarray analysis revealed specific gene signature of LEC and MC-L, and also their complementary role related to cytokine and growth factor profile, thus supporting the nurturing roles of the MC-L. We have also observed similar and differential gene expression between MC-L and MSC-BM.Conclusions: This study represents the first extensive gene expression analysis of limbal explant culture derived epithelial and mesenchymal cells and as such reveals new insight into the biology, ontogeny, and in vivo function of these cells

    A carotenoid-deficient mutant in Pantoea sp. YR343, a bacteria isolated from the Rhizosphere of Populus deltoides, is defective in root colonization

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    The complex interactions between plants and their microbiome can have a profound effect on the health and productivity of the plant host. A better understanding of the microbial mechanisms that promote plant health and stress tolerance will enable strategies for improving the productivity of economically important plants. Pantoea sp. YR343 is a motile, rod-shaped bacterium isolated from the roots of Populus deltoides that possesses the ability to solubilize phosphate and produce the phytohormone indole-3-acetic acid (IAA). Pantoea sp. YR343 readily colonizes plant roots and does not appear to be pathogenic when applied to the leaves or roots of selected plant hosts. To better understand the molecular mechanisms involved in plant association and rhizosphere survival by Pantoea sp. YR343, we constructed a mutant in which the crtB gene encoding phytoene synthase was deleted. Phytoene synthase is responsible for converting geranylgeranyl pyrophosphate to phytoene, an important precursor to the production of carotenoids. As predicted, the ΔcrtB mutant is defective in carotenoid production, and shows increased sensitivity to oxidative stress. Moreover, we find that the ΔcrtB mutant is impaired in biofilm formation and production of IAA. Finally we demonstrate that the ΔcrtB mutant shows reduced colonization of plant roots. Taken together, these data suggest that carotenoids are important for plant association and/or rhizosphere survival in Pantoea sp. YR343.Work at the University of Notre Dame was supported by DOE grant SC0006642 (RM) and by a subcontract from Oak Ridge National Laboratory (SP).http://www.frontiersin.orgam2016Microbiology and Plant Patholog

    Sustainable Water Reclamation from Different Feed Streams by Forward Osmosis Process Using Deep Eutectic Solvents as Reusable Draw Solution

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    A sustainable and low-cost reusable water recovery process from industrial wastewater may have potential positive impact toward the potable water crisis in several industrial processes. Quite a number of approaches such as chemical processes, biological treatment, and high-pressure membrane based processes have been developed to address this crucial issue but most of them suffer from several discrepancies. Due to the suitability of deep eutectic solvents (DESs) as promising draw solution (DS) for forward osmosis (FO) processes, herein the potential of DESs for the recovery of reusable water from seawater, dye contaminated wastewater, and tannery wastewater by continuous FO process is demonstrated. Under optimized process conditions, >90% reusable water was recovered from different feed solutions with an average water flux of 5 L m<sup>–2</sup> h<sup>–1</sup>. Due to the high freezing point (<i>T</i><sub>f</sub>) difference between water and DES, phase separation of the DES and water mixture obtained at the end of the process was achieved at a temperature ca. −5 °C, and DSs thus recovered were reused in subsequent batch experiments (three cycles), where minimal loss of water flux was observed. The recovered water was found to have low contamination making it suitable for different purposes
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