Energy and system dependence of high-pTp_T triggered two-particle near-side correlations

Previous studies have indicated that the near-side peak of high-$p_T$ triggered correlations can be decomposed into two parts, the \textit{Jet} and the \textit{Ridge}. We present data on the yield per trigger of the \textit{Jet} and the \textit{Ridge} from $d+Au$, $Cu+Cu$ and $Au+Au$ collisions at $\sqrt{s_{NN}}$ = 62.4 GeV and 200 GeV and compare data on the \textit{Jet} to PYTHIA 8.1 simulations for $p+p$. PYTHIA describes the \textit{Jet} component up to a scaling factor, meaning that PYTHIA can provide a better understanding of the \textit{Ridge} by giving insight into the effects of the kinematic cuts. We present collision energy and system dependence of the \textit{Ridge} yield, which should help distinguish models for the production mechanism of the \textit{Ridge}.Comment: 4 pages, 6 figures, proceedings for Hot Quarks in Estes Park, Colorad

The effects of trade-offs and disturbance on multi-species coexistence

This thesis uses theoretical models to answer questions that revolve around the ecological processes that maintain diversity. Chapter 1 studies the importance of competitive asymmetry on the likelihood of coexistence. Considering a competition-fecundity trade-off, we find conditions that allow coexistence of two species, and show the likelihood of these species coexisting increases with competitive asymmetry. Further, we demonstrate that asymmetry allows for the coexistence of an arbitrarily large number of species, although the likelihood of coexistence decreases as more species are considered. Chapters 2, 3 and 4 are all concerned with the effects of disturbance on diversity. In Chapter 2, we demonstrate that the frequency and intensity of disturbance events can affect the community dynamics in different ways. We demonstrate that the diversity-disturbance relationship can take several different forms as frequency and intensity interact to determine overall disturbance regimes. Chapter 3 examines which of three predicted trade-offs are likely to contribute most to coexistence. In particular, we derive the likelihood of two species coexisting as defence against disturbance, fecundity and juvenile growth rates vary between species. We show that a fecundity-defence trade-off is particularly sensitive to parameters, and is not expected to contribute to diversity in large communities. Further, we conclude that a fecundity-growth trade-off contributes more to the maintenance of diversity than a growth-defence trade-off, although the latter is expected to have some effect. In Chapter 4, we consider the effects of disturbance extent on the likelihood of three species coexistence. We demonstrate that in a single, well mixed community a fecundity-growth trade-off cannot support three species. We then use a metapopulation structure to show that spatial heterogeneity in disturbance regimes can increase diversity; showing that a community protected from disturbance can contribute to increase regional diversity, and increase diversity in a neighbouring patch with disturbance

Gene expression studies of developing bovine longissimus muscle from two different beef cattle breeds

Background: The muscle fiber number and fiber composition of muscle is largely determined during prenatal development. In order to discover genes that are involved in determining adult muscle phenotypes, we studied the gene expression profile of developing fetal bovine longissimus muscle from animals with two different genetic backgrounds using a bovine cDNA microarray. Fetal longissimus muscle was sampled at 4 stages of myogenesis and muscle maturation: primary myogenesis (d 60), secondary myogenesis (d 135), as well as beginning (d 195) and final stages (birth) of functional differentiation of muscle fibers. All fetuses and newborns (total n = 24) were from Hereford dams and crossed with either Wagyu (high intramuscular fat) or Piedmontese (GDF8 mutant) sires, genotypes that vary markedly in muscle and compositional characteristics later in postnatal life. Results: We obtained expression profiles of three individuals for each time point and genotype to allow comparisons across time and between sire breeds. Quantitative reverse transcription-PCR analysis of RNA from developing longissimus muscle was able to validate the differential expression patterns observed for a selection of differentially expressed genes, with one exception. We detected large-scale changes in temporal gene expression between the four developmental stages in genes coding for extracellular matrix and for muscle fiber structural and metabolic proteins. FSTL1 and IGFBP5 were two genes implicated in growth and differentiation that showed developmentally regulated expression levels in fetal muscle. An abundantly expressed gene with no functional annotation was found to be developmentally regulated in the same manner as muscle structural proteins. We also observed differences in gene expression profiles between the two different sire breeds. Wagyu-sired calves showed higher expression of fatty acid binding protein 5 (FABP5) RNA at birth. The developing longissimus muscle of fetuses carrying the Piedmontese mutation shows an emphasis on glycolytic muscle biochemistry and a large-scale up-regulation of the translational machinery at birth. We also document evidence for timing differences in differentiation events between the two breeds. Conclusion: Taken together, these findings provide a detailed description of molecular events accompanying skeletal muscle differentiation in the bovine, as well as gene expression differences that may underpin the phenotype differences between the two breeds. In addition, this study has highlighted a non-coding RNA, which is abundantly expressed and developmentally regulated in bovine fetal muscle

Exploring Early Parton Momentum Distribution with the Ridge from the Near-Side Jet

In a central nucleus-nucleus collision at high-energies, medium partons kicked by a near-side jet acquire a momentum along the jet direction and subsequently materialize as the observed ridge particles. They carry direct information on the early parton momentum distribution which can be extracted by using the ridge data for central AuAu collisions at \sqrt{s_{NN}}=200 GeV. The extracted parton momentum distribution has a thermal-like transverse momentum distribution but a non-Gaussian, relatively flat rapidity distribution at mid-rapidity with sharp kinematic boundaries at large rapidities that depend on the transverse momentum.Comment: In Proceedings of 20th International Conference on Ultra-Relativistic Nucleus Nucleus Collisions, Jaipur, India, Feb. 4-10, 200

Hypoglycaemia in Type 2 diabetes

The primary cause of hypoglycaemia in Type 2 diabetes is diabetes medication—in particular, those which raise insulin levels independently of blood glucose, such as sulphonylureas (SUs) and exogenous insulin. The risk of hypoglycaemia is increased in older patients, those with longer diabetes duration, lesser insulin reserve and perhaps in the drive for strict glycaemic control. Differing definitions, data collection methods, drug type/regimen and patient populations make comparing rates of hypoglycaemia difficult. It is clear that patients taking insulin have the highest rates of self-reported severe hypoglycaemia (25% in patients who have been taking insulin for > 5 years). SUs are associated with significantly lower rates of severe hypoglycaemia. However, large numbers of patients take SUs in the UK, and it is estimated that each year > 5000 patients will experience a severe event caused by their SU therapy which will require emergency intervention. Hypoglycaemia has substantial clinical impact, in terms of mortality, morbidity and quality of life. The cost implications of severe episodes—both direct hospital costs and indirect costs—are considerable: it is estimated that each hospital admission for severe hypoglycaemia costs around £1000. Hypoglycaemia and fear of hypoglycaemia limit the ability of current diabetes medications to achieve and maintain optimal levels of glycaemic control. Newer therapies, which focus on the incretin axis, may carry a lower risk of hypoglycaemia. Their use, and more prudent use of older therapies with low risk of hypoglycaemia, may help patients achieve improved glucose control for longer, and reduce the risk of diabetic complications

Performance of prototypes for the ALICE electromagnetic calorimeter

The performance of prototypes for the ALICE electromagnetic sampling calorimeter has been studied in test beam measurements at FNAL and CERN. A $4\times4$ array of final design modules showed an energy resolution of about 11% /$\sqrt{E(\mathrm{GeV})}$ $\oplus$ 1.7 % with a uniformity of the response to electrons of 1% and a good linearity in the energy range from 10 to 100 GeV. The electromagnetic shower position resolution was found to be described by 1.5 mm $\oplus$ 5.3 mm /$\sqrt{E \mathrm{(GeV)}}$. For an electron identification efficiency of 90% a hadron rejection factor of $>600$ was obtained.Comment: 10 pages, 10 figure