Confirmation of low genetic diversity and multiple breeding females in a social group of Eurasian badgers from microsatellite and field data

The Eurasian badger ( Meles meles ) is a facultatively social carnivore that shows only rudimentary co-operative behaviour and a poorly defined social hierarchy. Behavioural evidence and limited genetic data have suggested that more than one female may breed in a social group. We combine pregnancy detection by ultrasound and microsatellite locus scores from a well-studied badger population from Wytham Woods, Oxfordshire, UK, to demonstrate that multiple females reproduce within a social group. We found that at least three of seven potential mothers reproduced in a group that contained 11 reproductive age females and nine offspring. Twelve primers showed variability across the species range and only five of these were variable in Wytham. The microsatellites showed a reduced repeat number, a significantly higher number of nonperfect repeats, and moderate heterozygosity levels in Wytham. The high frequency of imperfect repeats and demographic phenomena might be responsible for the reduced levels of variability observed in the badger

Diagnosis of tuberculosis in groups of badgers: an exploration of the impact of trapping efficiency, infection prevalence and the use of multiple tests

Accurate detection of infection with Mycobacterium bovis in live badgers would enable targeted tuberculosis control. Practical challenges in sampling wild badger populations mean that diagnosis of infection at the group (rather than the individual) level is attractive. We modelled data spanning 7 years containing over 2000 sampling events from a population of wild badgers in southwest England to quantify the ability to correctly identify the infection status of badgers at the group level. We explored the effects of variations in: (1) trapping efficiency; (2) prevalence of M. bovis; (3) using three diagnostic tests singly and in combination with one another; and (4) the number of badgers required to test positive in order to classify groups as infected. No single test was able to reliably identify infected badger groups if 80% sensitive, at least 94% specific, and able to be performed rapidly in the field

Effect of culling on individual badger (Meles meles) behaviour: potential implications for bovine tuberculosis transmission

1. Culling wildlife as a form of disease management can have unexpected and sometimes counterproductive outcomes. In the UK, badgers (Meles meles) are culled in efforts to reduce badger-to-cattle transmission of Mycobacterium bovis, the causative agent of bovine tuberculosis (TB). However, culling has previously been associated with both increased and decreased incidence of M. bovis infection in cattle. 2. The adverse effects of culling have been linked to cull-induced changes in badger ranging, but such changes are not well documented at the individual level. Using GPS-collars, we characterised individual badger behaviour within an area subjected to widespread industry-led culling, comparing it with the same area before culling and with three unculled areas. 3. Culling was associated with a 61% increase (95% CI 27-103%) in monthly home range size, a 39% increase (95% CI 28-51%) in nightly maximum distance from the sett, and a 17% increase (95% CI 11-24%) in displacement between successive GPS-collar locations recorded at 20-minute intervals. Despite travelling further, we found a 91.2 minute (95% CI 67.1-115.3 minute) reduction in the nightly activity time of individual badgers associated with culling. These changes became apparent while culls were ongoing and persisted after culling ended. 4. Expanded ranging in culled areas was associated with individual badgers visiting 45% (95% CI 15-80%) more fields each month, suggesting that surviving individuals had the opportunity to contact more cattle. Moreover, surviving badgers showed a 19.9-fold increase (95% CI 10.8-36.4 increase) in the odds of trespassing into neighbouring group territories, increasing opportunities for intergroup contact. 5. Synthesis and Applications: Badger culling was associated with behavioural changes among surviving badgers which potentially increased opportunities for both badger-to-badger and badger-to-cattle transmission of M. bovis. Furthermore, by reducing the time badgers spent active, culling may have reduced badgers’ accessibility to shooters, potentially undermining subsequent population control efforts. Our results specifically illustrate the challenges posed by badger behaviour to cull-based TB control strategies and furthermore, they highlight the negative impacts culling can have on integrated disease control strategies

A reconciled solution of Meltwater Pulse 1A sources using sea-level fingerprinting

The most rapid global sea-level rise event of the last deglaciation, Meltwater Pulse 1A (MWP-1A), occurred ∼14,650 years ago. Considerable uncertainty regarding the sources of meltwater limits understanding of the relationship between MWP-1A and the concurrent fast-changing climate. Here we present a data-driven inversion approach, using a glacio-isostatic adjustment model to invert for the sources of MWP-1A via sea-level constraints from six geographically distributed sites. The results suggest contributions from Antarctica, 1.3 m (0–5.9 m; 95% probability), Scandinavia, 4.6 m (3.2–6.4 m) and North America, 12.0 m (5.6–15.4 m), giving a global mean sea-level rise of 17.9 m (15.7–20.2 m) in 500 years. Only a North American dominant scenario successfully predicts the observed sea-level change across our six sites and an Antarctic dominant scenario is firmly refuted by Scottish isolation basin records. Our sea-level based results therefore reconcile with field-based ice-sheet reconstructions

Reply to: Punctuated transgression (?): Comment on Oliver, T.S.N., Donaldson, P., Sharples, C., Roach, M., and Woodroffe, C.D. Punctuated progradation of the Seven Mile Beach Holocene barrier system, southeastern Tasmania

Our interpretation of the depositional history of the prograded barrier at Seven Mile Beach in Tasmania, described in Oliver et al. (2017a), was based on the morphology of ridges apparent in the LiDAR-based digital elevation data and a sample of 14 optically-stimulated luminescence (OSL) ages. Dougherty (2018) has identified gaps in the chronology and speculated that progradation may have occurred as sea level fell from a mid-Holocene highstand inappropriately applying sea-level curves from mainland Australia. Despite a highstand being inferred by early research in Tasmania, glacio-isostatic modelling and recent sea-level studies adopted a prevailing view that excluded a highstand. Our observations led us to question this prevailing view and to suggest that it might be appropriate to reopen the debate on Holocene sea-level change in Tasmania. We welcome the renewed interest in the chronology and sea-level history of this prograded barrier, and look forward to further clarification based on new evidence. The site may have the potential to become one of the more continuous and better-constrained sea-level records in southern Australia

Rabies elimination research: juxtaposing optimism, pragmatism and realism

More than 100 years of research has now been conducted into the prevention, control and elimination of rabies with safe and highly efficacious vaccines developed for use in human and animal populations. Domestic dogs are a major reservoir for rabies, and although considerable advances have been made towards the elimination and control of canine rabies in many parts of the world, the disease continues to kill tens of thousands of people every year in Africa and Asia. Policy efforts are now being directed towards a global target of zero human deaths from dog-mediated rabies by 2030 and the global elimination of canine rabies. Here we demonstrate how research provides a cause for optimism as to the feasibility of these goals through strategies based around mass dog vaccination. We summarize some of the pragmatic insights generated from rabies epidemiology and dog ecology research that can improve the design of dog vaccination strategies in low- and middle-income countries and which should encourage implementation without further delay. We also highlight the need for realism in reaching the feasible, although technically more difficult and longer-term goal of global elimination of canine rabies. Finally, we discuss how research on rabies has broader relevance to the control and elimination of a suite of diseases of current concern to human and animal health, providing an exemplar of the value of a ‘One Health’ approach

Successive use of shared space by badgers and cattle: implications for Mycobacterium bovis transmission

Managing infectious disease demands understanding pathogen transmission. In Britain, transmission of Mycobacterium bovis from badgers (Meles meles) to cattle hinders the control of bovine tuberculosis (TB), but the mechanism of such transmission is uncertain. As badgers and cattle seldom interact directly, transmission might occur in their shared environment through contact with contamination such as faeces, urine and saliva. We used concurrent GPS collar tracking of badgers and cattle at four sites in Cornwall, southwest Britain, to test whether each species used locations previously occupied by the other species, within the survival time of M. bovis bacteria. Although analyses of the same data set showed that badgers avoided cattle, we found no evidence that this avoidance persisted over time: neither GPS-collared badgers nor cattle avoided space which had been occupied by the other species in the preceding 36 h. Defining a contact event as an animal being located <5 m from space occupied by the other species within the previous 36 h, we estimated that a herd of 176 cattle (mean herd size in our study areas) would contact badgers at least 6.0 times during an average 24-h period. Similarly, we estimated that a social group of 3.5 badgers (mean group size in our study areas) would contact cattle at least 0.76 times during an average night. Such frequent successive use of the same shared space, within the survival time of M. bovis bacteria, could potentially facilitate M. bovis transmission via the environment

Use of farm buildings by wild badgers: implications for the transmission of bovine tuberculosis

Diseases transmitted from wildlife to livestock or people may be managed more effectively if it is known where transmission occurs. In Britain, farm buildings have been proposed as important sites of Mycobacterium bovis transmission between wild badgers (Meles meles) and cattle, contributing to the maintenance of bovine tuberculosis (TB). Farmers are therefore advised to exclude badgers from buildings. We used GPS-collars and remote cameras to characterise badgers’ use of farm buildings at four TB-affected sites in southwestern Britain. Across 54 GPS-collared badgers, 99.8% of locations fell ≥3m from farm buildings. Remote cameras deployed in feed stores recorded just 12 nights with badger visits among 3,134 store-nights of monitoring. GPS-collared badgers used space near farm buildings less than expected based on availability, significantly preferring land ≥100m from buildings. There was no positive association between badgers’ use of farm buildings and the infection status of either badgers or cattle. Six GPS-collared badgers which regularly visited farm buildings all tested negative for M. bovis. Overall, test-positive badgers spent less time close to farm buildings than did test-negative animals. Badger visits to farm buildings were more frequent where badger population densities were high. Our findings suggest that, while buildings may offer important opportunities for M. bovis transmission between badgers and cattle, building use by badgers is not a prerequisite for such transmission. Identifying ways to minimise infectious contact between badgers and cattle away from buildings is therefore a management priority