XMM-Newton observations of the Galactic Centre Region - II: The soft thermal emission

We have extended our earlier study (Heard & Warwick 2013, Paper I) of the X-ray emission emanating from the central 100 pc x 100 pc region of our Galaxy to an investigation of several features prominent in the soft X-ray (2-4.5 keV) band. We focus on three specific structures: a putative bipolar outflow from the vicinity of Sgr A*; a high surface brightness region located roughly 12 arcmin to the north-east of Sgr A*; and a lower surface-brightness extended loop feature seen to the south of Sgr A*. We show that all three structures are thermal in nature and have similar temperatures (kT ~ 1 keV). The inferred X-ray luminosities lie in the range (2 - 10) x 10^34 erg s^-1. In the case of the bipolar feature we suggest that the hot plasma is produced by the shock-heating of the winds from massive stars within the Central Cluster, possibly collimated by the Circumnuclear Disc. Alternatively the outflow may be driven by outbursts on Sgr A*, which follow tidal disruption events occurring at a rate of roughly 1 every 4000 yr. The north-east enhancement is centred on a candidate PWN which has a relatively hard non-thermal X-ray spectrum. We suggest that the coincident soft-thermal emission traces the core of a new thermal-composite supernova remnant, designated as SNR G0.13-0.12. There is no clear evidence for an associated radio shell but such a feature may be masked by the bright emission of the nearby Radio Arc and other filamentary structures. SNR G0.13-0.12 is very likely interacting with the nearby molecular cloud, G0.11-0.11, and linked to the Fermi source, 2FGL J1746.4-2851c. Finally we explore a previous suggestion that the elliptically-shaped X-ray loop to the south of Sgr A*, of maximum extent ~45 pc, represents the shell of a superbubble located in the GC region. Although plausible, the interpretation of this feature in terms a coherent physical structure awaits confirmation.Comment: 17 pages, 6 figures, accepted for publication in MNRA

An algorithm for determining program feasibility of a multi-mode PAM commutator telemetry system Technical report no. 10

Algorithm formulation for evaluation of strapping arrangement programs for PAM multimode commutation system of Saturn telemetry syste

Comparison of seasonal habitat selection between threatened woodland caribou ecotypes in central British Columbia

Woodland caribou (Rangifer tarandus caribou) in British Columbia have been classified into ecotypes based on differences in use of habitat in winter. Although recovery planning focuses on ecotypes, habitat use and selection varies within ecotypes. Our objectives were to compare habitat use and selection among previously identified woodland caribou herds at the transition zone between northern (Moberly, Quintette, and Kennedy herds) and mountain (Parsnip herd) ecotypes in central British Columbia. We developed selection models for each herd in spring, calving, summer/fall, early and late winter. Topographic models best predicted selection by most herds in most seasons, but importance of vegetation-cover was highlighted by disproportionate use of specific vegetation-cover types by all caribou herds (e.g., in early winter, 75% of Kennedy locations were in pine-leading stands, 84% of Parsnip locations were in fir and fir-leading stands, and 87 and 96% of locations were in alpine for the Moberly and Quintette herds, respectively). Using a combination of GPS and VHF radio-collar locations, we documented some spatial overlap among herds within the year, but use of vegetation-cover types and selection of elevations, aspects, and vegetation-cover types differed among herds and within ecotypes in all seasons. Habitat use and selection were most similar between the two northern-ecotype herds residing on the eastern side of the Rocky Mountains. This research indicates that habitat use and selection by caribou herds in all seasons is more variable than ecotype classifications suggest and demonstrates the value of undertaking herd-specific mapping of critical habitat for woodland caribou

New Langevin and Gradient Thermostats for Rigid Body Dynamics

We introduce two new thermostats, one of Langevin type and one of gradient (Brownian) type, for rigid body dynamics. We formulate rotation using the quaternion representation of angular coordinates; both thermostats preserve the unit length of quaternions. The Langevin thermostat also ensures that the conjugate angular momenta stay within the tangent space of the quaternion coordinates, as required by the Hamiltonian dynamics of rigid bodies. We have constructed three geometric numerical integrators for the Langevin thermostat and one for the gradient thermostat. The numerical integrators reflect key properties of the thermostats themselves. Namely, they all preserve the unit length of quaternions, automatically, without the need of a projection onto the unit sphere. The Langevin integrators also ensure that the angular momenta remain within the tangent space of the quaternion coordinates. The Langevin integrators are quasi-symplectic and of weak order two. The numerical method for the gradient thermostat is of weak order one. Its construction exploits ideas of Lie-group type integrators for differential equations on manifolds. We numerically compare the discretization errors of the Langevin integrators, as well as the efficiency of the gradient integrator compared to the Langevin ones when used in the simulation of rigid TIP4P water model with smoothly truncated electrostatic interactions. We observe that the gradient integrator is computationally less efficient than the Langevin integrators. We also compare the relative accuracy of the Langevin integrators in evaluating various static quantities and give recommendations as to the choice of an appropriate integrator.Comment: 16 pages, 4 figure

Finding the Center of Mass of a Soft Spring

This article shows how to use calculus to find the center of mass position of a soft cylindrical helical spring that is suspended vertically. The spring is non-uniformly stretched by the action of gravity. A general expression for the vertical position of the center of mass is obtained.Comment: LaTeX, 7 pages, 2 figures. Minor changes to agree with published versio

Trophic Structure of Macrobenthic Communities in Northern Gulf of Mexico Estuaries

Trophic structure of estuarine benthic communities in the northern Gulf of Mexico was characterized according to the functional roles and geographic distributions of the macrobenthos. Macrobenthic organisms collected during two years of study were assigned to trophic groups to assess the relative utilization of detritus and other resources. Three groups of detritivores (surface-deposit feeders, subsurface-deposit feeders, and filter feeders) were numerically dominant among the benthos, each of which accounted for 25-30% of total abundance across regions. Carnivorous macrobenthos also comprised an appreciable portion (12%), while omnivores (\u3c3%) and other groups (\u3c4%) were poorly represented. Dominance by detritivores is consistent with current concepts regarding the role of macrobenthos in processing detritus of Gulf of Mexico estuaries

Functional P2X7 receptors in the auditory nerve of hearing rodents localize exclusively to peripheral glia

P2X7 receptors (P2X7Rs) are associated with numerous pathophysiological mechanisms, and this promotes them as therapeutic targets for certain neurodegenerative conditions. However, the identity of P2X7R-expressing cells in the nervous system remains contentious. Here we examined P2X7R functionality in auditory nerve cells from rodents of either sex, and determined their functional and anatomical expression pattern. In whole-cell recordings from rat spiral ganglion cultures, the purinergic agonist 2',3'-O-(4-benzoylbenzoyl)-ATP (BzATP) activated desensitizing currents in spiral ganglion neurons (SGNs), but non-desensitizing currents in glia that were blocked by P2X7R-specific antagonists. In imaging experiments, BzATP gated sustained Ca2+ entry into glial cells. BzATP-gated uptake of the fluorescent dye YO-PRO-1 was reduced and slowed by P2X7R-specific antagonists. In rats, P2X7Rs were immuno-localized predominantly within satellite glial cells (SGCs) and Schwann cells (SCs). P2X7R expression was not detected in the portion of the auditory nerve within the central nervous system. Mouse models allowed further exploration of the distribution of cochlear P2X7Rs. In GENSAT reporter mice, EGFP expression driven via the P2rx7 promoter was evident in SGCs and SCs but was undetectable in SGNs. A second transgenic model showed a comparable cellular distribution of EGFP-tagged P2X7Rs. In wild-type mice the discrete glial expression was confirmed using a P2X7-specific nanobody construct. Our study shows that P2X7Rs are expressed by peripheral glial cells, rather than by afferent neurons. Description of functional signatures and cellular distributions of these enigmatic proteins in the peripheral nervous system will help our understanding of ATP-dependent effects contributing to hearing loss and other sensory neuropathies.Significance statementP2X7 receptors have been the subject of much scrutiny in recent years. They have been promoted as therapeutic targets in a number of diseases of the nervous system, yet the specific cellular location of these receptors remains the subject of intense debate. In the auditory nerve, connecting the inner ear to the brainstem, we show these multi-modal ATP-gated channels localize exclusively to peripheral glial cells rather than the sensory neurons, and are not evident in central glia. Physiological responses in the peripheral glia display classical hallmarks of P2X7 receptor activation, including the formation of ion-permeable and also macromolecule-permeable pores. These qualities suggest these proteins could contribute to glial-mediated inflammatory processes in the auditory periphery under pathological disease states

Accelerating Bayesian hierarchical clustering of time series data with a randomised algorithm

We live in an era of abundant data. This has necessitated the development of new and innovative statistical algorithms to get the most from experimental data. For example, faster algorithms make practical the analysis of larger genomic data sets, allowing us to extend the utility of cutting-edge statistical methods. We present a randomised algorithm that accelerates the clustering of time series data using the Bayesian Hierarchical Clustering (BHC) statistical method. BHC is a general method for clustering any discretely sampled time series data. In this paper we focus on a particular application to microarray gene expression data. We define and analyse the randomised algorithm, before presenting results on both synthetic and real biological data sets. We show that the randomised algorithm leads to substantial gains in speed with minimal loss in clustering quality. The randomised time series BHC algorithm is available as part of the R package BHC, which is available for download from Bioconductor (version 2.10 and above) via http://bioconductor.org/packages/2.10/bioc/html/BHC.html. We have also made available a set of R scripts which can be used to reproduce the analyses carried out in this paper. These are available from the following URL. https://sites.google.com/site/randomisedbhc/