Collective modes of a quasi two-dimensional Bose condensate in large gas parameter regime

We have theoretically studied the collective modes of a quasi two-dimensional (Q2D) Bose condensate in the large gas parameter regime by using a formalism which treats the interaction energy beyond the mean-field approximation. In the calculation we use the perturbative expansion for the interaction energy by incorporating the Lee, Huang and Yang (LHY) correction term. The results show that incorporation of this higher order term leads to detectable modifications in the mode frequencies.Comment: 10 pages, 2 figure

A laboratory-numerical approach for modelling scale effects in dry granular slides

Granular slides are omnipresent in both natural and industrial contexts. Scale effects are changes in physical behaviour of a phenomenon at different geometric scales, such as between a laboratory experiment and a corresponding larger event observed in nature. These scale effects can be significant and can render models of small size inaccurate by underpredicting key characteristics such as ow velocity or runout distance. Although scale effects are highly relevant to granular slides due to the multiplicity of length and time scales in the flow, they are currently not well understood. A laboratory setup under Froude similarity has been developed, allowing dry granular slides to be investigated at a variety of scales, with a channel width configurable between 0.25-1.00 m. Maximum estimated grain Reynolds numbers, which quantify whether the drag force between a particle and the surrounding air act in a turbulent or viscous manner, are found in the range 102-103. A discrete element method (DEM) simulation has also been developed, validated against an axisymmetric column collapse and a granular slide experiment of Hutter and Koch (1995), before being used to model the present laboratory experiments and to examine a granular slide of significantly larger scale. This article discusses the details of this laboratory-numerical approach, with the main aim of examining scale effects related to the grain Reynolds number. Increasing dust formation with increasing scale may also exert influence on laboratory experiments. Overall, significant scale effects have been identified for characteristics such as ow velocity and runout distance in the physical experiments. While the numerical modelling shows good general agreement at the medium scale, it does not capture differences in behaviour seen at the smaller scale, highlighting the importance of physical models in capturing these scale effects

In-cell intrabody selection from a diverse human library identifies C12orf4 protein as a new player in rodent mast cell degranulation.

The high specificity of antibodies for their antigen allows a fine discrimination of target conformations and post-translational modifications, making antibodies the first choice tool to interrogate the proteome. We describe here an approach based on a large-scale intracellular expression and selection of antibody fragments in eukaryotic cells, so-called intrabodies, and the subsequent identification of their natural target within living cell. Starting from a phenotypic trait, this integrated system allows the identification of new therapeutic targets together with their companion inhibitory intrabody. We applied this system in a model of allergy and inflammation. We first cloned a large and highly diverse intrabody library both in a plasmid and a retroviral eukaryotic expression vector. After transfection in the RBL-2H3 rat basophilic leukemia cell line, we performed seven rounds of selection to isolate cells displaying a defect in FcεRI-induced degranulation. We used high throughput sequencing to identify intrabody sequences enriched during the course of selection. Only one intrabody was common to both plasmid and retroviral selections, and was used to capture and identify its target from cell extracts. Mass spectrometry analysis identified protein RGD1311164 (C12orf4), with no previously described function. Our data demonstrate that RGD1311164 is a cytoplasmic protein implicated in the early signaling events following FcεRI-induced cell activation. This work illustrates the strength of the intrabody-based in-cell selection, which allowed the identification of a new player in mast cell activation together with its specific inhibitor intrabody