STRAW-b (STRings for Absorption length in Water-b): the second pathfinder mission for the Pacific Ocean Neutrino Experiment

Since 2018, the potential for a high-energy neutrino telescope, named the Pacific Ocean Neutrino Experiment (P-ONE), has been thoroughly examined by two pathfinder missions, STRAW and STRAW-b, short for short for Strings for Absorption Length in Water. The P-ONE project seeks to install a neutrino detector with a one cubic kilometer volume in the Cascadia Basin's deep marine surroundings, situated near the western shores of Vancouver Island, Canada. To assess the environmental conditions and feasibility of constructing a neutrino detector of that scale, the pathfinder missions, STRAW and STRAW-b, have been deployed at a depth of 2.7 km within the designated site for P-ONE and were connected to the NEPTUNE observatory, operated by Ocean Networks Canada (ONC). While STRAW focused on analyzing the optical properties of water in the Cascadia Basin, \ac{strawb} employed cameras and spectrometers to investigate the characteristics of bioluminescence in the deep-sea environment. This report introduces the STRAW-b concept, covering its scientific objectives and the instrumentation used. Furthermore, it discusses the design considerations implemented to guarantee a secure and dependable deployment process of STRAW-b. Additionally, it showcases the data collected by battery-powered loggers, which monitored the mechanical stress on the equipment throughout the deployment. The report also offers an overview of STRAW-b's operation, with a specific emphasis on the notable advancements achieved in the data acquisition (DAQ) system and its successful integration with the server infrastructure of ONC.Comment: 20 pages, 11 figures, 2 table

An Investigation Into the Makeup of a Successful Mugshare Program : Materials, Tracking, and Organization

This investigation explores the UBC Mugshare program and strategies required to execute a successful program. Three primary issues were focused upon: the most sustainable material, what made other mugshare programs successful, and how can the mugs be properly accounted for. A triple bottom line analysis of potential mug materials shows that although plastic is more cost efficient than stainless steel, it has a higher energy footprint, and a number of health concerns attached to it. Accounting for the mug usage requires the ability to track mugs and participants. Digital identification accomplishes this cleanly, the increased data capacity of QR codes or the portability of RFID is unnecessary for this application and a simple barcode can easily accomplish the task. From other mugshare programs it is clear that the two biggest barriers to participation are cost and awareness. The majority of survey respondents indicate that they are unaware these programs exist and how they operate. Additionally, those that were aware tended to shy away from participation if the cost to join is above $5. Based on these findings, it is recommended that the UBC mugshare program proceed with the stainless steel mugs it is currently using. As the program grows and pen and paper accounting becomes infeasible a barcode tracking system should be implemented until such a time that mugshare can link with the UBC card. Finally, two recommendations for implementation are to keep the signup fee close to$5 and to dedicate resources to building awareness of the program. Disclaimer: “UBC SEEDS provides students with the opportunity to share the findings of their studies, as well as their opinions, conclusions and recommendations with the UBC community. The reader should bear in mind that this is a student project/report and is not an official document of UBC. Furthermore readers should bear in mind that these reports may not reflect the current status of activities at UBC. We urge you to contact the research persons mentioned in a report or the SEEDS Coordinator about the current status of the subject matter of a project/report.”Applied Science, Faculty ofUnreviewedUndergraduat

Two-year optical site characterization for the Pacific Ocean Neutrino Experiment (P-ONE) in the Cascadia Basin

The STRings for Absorption length in Water (STRAW) are the first in a series of pathfinders for the Pacific Ocean Neutrino Experiment (P-ONE), a future large-scale neutrino telescope in the north-eastern Pacific Ocean. STRAW consists of two $$150\,\mathrm {m}$$ long mooring lines instrumented with optical emitters and detectors. The pathfinder is designed to measure the attenuation length of the water and perform a long-term assessment of the optical background at the future P-ONE site. After 2 years of continuous operation, measurements from STRAW show an optical attenuation length of about 28 m at $$450\,\mathrm {nm}$$. Additionally, the data allow a study of the ambient undersea background. The overall optical environment reported here is comparable to other deep-water neutrino telescopes and qualifies the site for the deployment of P-ONE

Genetic modifiers of risk and age at onset in GBA associated Parkinson's disease and Lewy body dementia.

This is a pre-copyedited, author-produced version of an article accepted for publication in International Journal of Epidemiology, following peer review. The version of record: Cornelis Blauwendraat, Xylena Reed, Lynne Krohn et al., on behalf of the International Parkinson’s Disease Genomics Consortium (IPDGC), Genetic modifiers of risk and age at onset in GBA associated Parkinson’s disease and Lewy body dementia, Brain, Volume 143, Issue 1, January 2020, Pages 234–248, https://doi.org/10.1093/brain/awz350 is available online at: https://doi.org/10.1093/brain/awz350.Parkinson's disease is a genetically complex disorder. Multiple genes have been shown to contribute to the risk of Parkinson's disease, and currently 90 independent risk variants have been identified by genome-wide association studies. Thus far, a number of genes (including SNCA, LRRK2, and GBA) have been shown to contain variability across a spectrum of frequency and effect, from rare, highly penetrant variants to common risk alleles with small effect sizes. Variants in GBA, encoding the enzyme glucocerebrosidase, are associated with Lewy body diseases such as Parkinson's disease and Lewy body dementia. These variants, which reduce or abolish enzymatic activity, confer a spectrum of disease risk, from 1.4- to >10-fold. An outstanding question in the field is what other genetic factors that influence GBA-associated risk for disease, and whether these overlap with known Parkinson's disease risk variants. Using multiple, large case-control datasets, totalling 217 165 individuals (22 757 Parkinson's disease cases, 13 431 Parkinson's disease proxy cases, 622 Lewy body dementia cases and 180 355 controls), we identified 1691 Parkinson's disease cases, 81 Lewy body dementia cases, 711 proxy cases and 7624 controls with a GBA variant (p.E326K, p.T369M or p.N370S). We performed a genome-wide association study and analysed the most recent Parkinson's disease-associated genetic risk score to detect genetic influences on GBA risk and age at onset. We attempted to replicate our findings in two independent datasets, including the personal genetics company 23andMe, Inc. and whole-genome sequencing data. Our analysis showed that the overall Parkinson's disease genetic risk score modifies risk for disease and decreases age at onset in carriers of GBA variants. Notably, this effect was consistent across all tested GBA risk variants. Dissecting this signal demonstrated that variants in close proximity to SNCA and CTSB (encoding cathepsin B) are the most significant contributors. Risk variants in the CTSB locus were identified to decrease mRNA expression of CTSB. Additional analyses suggest a possible genetic interaction between GBA and CTSB and GBA p.N370S induced pluripotent cell-derived neurons were shown to have decreased cathepsin B expression compared to controls. These data provide a genetic basis for modification of GBA-associated Parkinson's disease risk and age at onset, although the total contribution of common genetics variants is not large. We further demonstrate that common variability at genes implicated in lysosomal function exerts the largest effect on GBA associated risk for disease. Further, these results have implications for selection of GBA carriers for therapeutic interventions