Quantum cosmic models and thermodynamics

The current accelerating phase of the evolution of the universe is considered by constructing most economical cosmic models that use just general relativity and some dominating quantum effects associated with the probabilistic description of quantum physics. Two of such models are explicitly analyzed. They are based on the existence of a sub-quantum potential and correspond to a generalization of the spatially flat exponential model of de Sitter space. The thermodynamics of these two cosmic solutions is discussed, using the second principle as a guide to choose which among the two is more feasible. The paper also discusses the relativistic physics on which the models are based, their holographic description, some implications from the classical energy conditions, and an interpretation of dark energy in terms of the entangled energy of the universe.Comment: 15 pages, 1 figure, accepted for publication in Class. Quantum Gra

A dark energy multiverse

We present cosmic solutions corresponding to universes filled with dark and phantom energy, all having a negative cosmological constant. All such solutions contain infinite singularities, successively and equally distributed along time, which can be either big bang/crunchs or big rips singularities. Classicaly these solutions can be regarded as associated with multiverse scenarios, being those corresponding to phantom energy that may describe the current accelerating universe

NPF update: Light-weight mirror development in Chile

Planet Formation research is blooming in an era where we are moving from speaking about "protoplanetary disks" to "planet forming disks" (Andrews et al., 2018). However, this transition is still motivated by indirect (but convincing) hints. Up to date, the direct detection of planets "in the making" remains elusive with the remarkable exception of PDS70b and c (Haffert et al., 2019; Keppler et al., 2018; M\"uller et al., 2018). The scarcity of detections is attributable to technical challenges, and even for the rare jewels that we can detect, characterization (resolving their hill spheres) is unachievable. The next step in this direction demands from near to mid-infrared interferometry to jump from $\sim$100 m baselines to $\sim$1 km, and from very few telescopes (two to six) to 20 or more (PFI like concepts, Monnier et al. 2018). This transition needs for more affordable near to mid-infrared telescopes to be designed. Since the driving cost for such telescopes resides on the primary mirror, in particular scaling with its diameter and weight, our approach to tackle this problem relies on the production of low-cost light mirrors.Comment: 7 pages, 4 figures, Submitted to SPI

Quality control of the CFRP mirror manufacturing process at NPF

The surface quality of replicated CFRP mirrors is ideally expected to be as good as the mandrel from which they are manufactured. In practice, a number of factors produce surface imperfections in the final mirrors at different scales. To understand where this errors come from, and develop improvements to the manufacturing process accordingly, a wide range of metrology techniques and quality control methods must be adopted. Mechanical and optical instruments are employed to characterise glass mandrels and CFRP replicas at different spatial frequency ranges. Modal analysis is used to identify large scale aberrations, complemented with a spectral analysis at medium and small scales. It is seen that astigmatism is the dominant aberration in the CFRP replicas. On the medium and small scales, we have observed that fiber print-through and surface roughness can be improved significantly by an extra resin layer over the replica's surface, but still some residual irregularities are present.Comment: 8 pages, 7 figures. Submitted to SPIE Astronomical Telescopes + Instrumentation 2020 digital foru

Effects of Slotted Water Control Structures on Nekton Movement within Salt Marshes

Water control structures (WCSs) restrict hydrological connectivity in salt marshes and thereby impede nekton movement within the greater habitat mosaic. Transient fishery species, which spawn outside salt marshes and must get past these barriers to reach spawning areas or salt-marsh nurseries, are especially vulnerable to these structures. Water control structures incorporating slots (narrow vertical openings spanning most of the water column) are thought to improve nekton passage; however, few studies have directly examined nekton passage through WCS slots. Dual-frequency identification sonar (DIDSON) acoustic imaging was used monthly (April-September 2010) on diurnal flood tides to examine nekton movement through 15-cm-wide slots at two identical WCSs located in Louisiana tidal marsh channels. Nekton behavior was compared between these WCSs and a nearby natural salt-marsh creek. Examination of 12 h of subsampled acoustic data revealed large concentrations of salt-marsh nekton at the WCSs (n = 2,970 individuals total), but passage rates through the slots were low (\u3c= 10% of total observed individuals migrated via the slots). Most migrating fish were observed leaving the managed area and swimming against a flood tide. The mean size of migrating individuals (similar to 25 cm TL) did not differ in relation to swimming direction (going into versus exiting the managed marsh) and was similar to that reported from other studies examining similar slot widths. Nekton formed congregations in the WCS channel, but no congregations were observed in the natural salt-marsh creek, even though nekton species composition and sizes were similar among sites. The WCSs in our study appear to function as ecological hot spots, where large individuals may encounter enhanced foraging opportunities but also fishing mortality and where smaller individuals may experience greater predation rates

CR1 Knops blood group alleles are not associated with severe malaria in the Gambia

The Knops blood group antigen erythrocyte polymorphisms have been associated with reduced falciparum malaria-based in vitro rosette formation (putative malaria virulence factor). Having previously identified single-nucleotide polymorphisms (SNPs) in the human complement receptor 1 (CR1/CD35) gene underlying the Knops antithetical antigens Sl1/Sl2 and McC(a)/McC(b), we have now performed genotype comparisons to test associations between these two molecular variants and severe malaria in West African children living in the Gambia. While SNPs associated with Sl:2 and McC(b+) were equally distributed among malaria-infected children with severe malaria and control children not infected with malaria parasites, high allele frequencies for Sl 2 (0.800, 1,365/1,706) and McC(b) (0.385, 658/1706) were observed. Further, when compared to the Sl 1/McC(a) allele observed in all populations, the African Sl 2/McC(b) allele appears to have evolved as a result of positive selection (modified Nei-Gojobori test Ka-Ks/s.e.=1.77, P-value <0.05). Given the role of CR1 in host defense, our findings suggest that Sl 2 and McC(b) have arisen to confer a selective advantage against infectious disease that, in view of these case-control study data, was not solely Plasmodium falciparum malaria. Factors underlying the lack of association between Sl 2 and McC(b) with severe malaria may involve variation in CR1 expression levels

Mitochondrial phylogeography and demographic history of the Vicuña: implications for conservation

The vicuña (Vicugna vicugna; Miller, 1924) is a conservation success story, having recovered from near extinction in the 1960s to current population levels estimated at 275 000. However, lack of information about its demographic history and genetic diversity has limited both our understanding of its recovery and the development of science-based conservation measures. To examine the evolution and recent demographic history of the vicuña across its current range and to assess its genetic variation and population structure, we sequenced mitochondrial DNA from the control region (CR) for 261 individuals from 29 populations across Peru, Chile and Argentina. Our results suggest that populations currently designated as Vicugna vicugna vicugna and Vicugna vicugna mensalis comprise separate mitochondrial lineages. The current population distribution appears to be the result of a recent demographic expansion associated with the last major glacial event of the Pleistocene in the northern (18 to 22°S) dry Andes 14–12 000 years ago and the establishment of an extremely arid belt known as the 'Dry Diagonal' to 29°S. Within the Dry Diagonal, small populations of V. v. vicugna appear to have survived showing the genetic signature of demographic isolation, whereas to the north V. v. mensalis populations underwent a rapid demographic expansion before recent anthropogenic impacts

Understanding the early evolutionary stages of a tandem drosophila melanogaster-specific gene family: A structural and functional population study

Gene families underlie genetic innovation and phenotypic diversification. However, our understanding of the early genomic and functional evolution of tandemly arranged gene families remains incomplete as paralog sequence similarity hinders their accurate characterization. The Drosophila melanogaster-specific gene family Sdic is tandemly repeated and impacts sperm competition. We scrutinized Sdic in 20 geographically diverse populations using reference-quality genome assemblies, read-depth methodologies, and qPCR, finding that ∼90% of the individuals harbor 3-7 copies as well as evidence of population differentiation. In strains with reliable gene annotations, copy number variation (CNV) and differential transposable element insertions distinguish one structurally distinct version of the Sdic region per strain. All 31 annotated copies featured protein-coding potential and, based on the protein variant encoded, were categorized into 13 paratypes differing in their 30 ends, with 3-5 paratypes coexisting in any strain examined. Despite widespread gene conversion, the only copy present in all strains has functionally diverged at both coding and regulatory levels under positive selection. Contrary to artificial tandem duplications of the Sdic region that resulted in increasedmale expression, CNV in cosmopolitan strains did not correlate with expression levels, likely as a result of differential genome modifier composition. Duplicating the region did not enhance sperm competitiveness, suggesting a fitness cost at high expression levels or a plateau effect. Beyond facilitating a minimally optimal expression level, Sdic CNV acts as a catalyst of protein and regulatory diversity, showcasing a possible evolutionary path recently formed tandemmultigene families can follow toward long-term consolidation in eukaryotic genomes

Geographic Variation in Salt Marsh Structure and Function for Nekton: a Guide to Finding Commonality Across Multiple Scales

Coastal salt marshes are distributed widely across the globe and are considered essential habitat for many fish and crustacean species. Yet, the literature on fishery support by salt marshes has largely been based on a few geographically distinct model systems, and as a result, inadequately captures the hierarchical nature of salt marsh pattern, process, and variation across space and time. A better understanding of geographic variation and drivers of commonalities and differences across salt marsh systems is essential to informing future management practices. Here, we address the key drivers of geographic variation in salt marshes: hydroperiod, seascape configuration, geomorphology, climatic region, sediment supply and riverine input, salinity, vegetation composition, and human activities. Future efforts to manage, conserve, and restore these habitats will require consideration of how environmental drivers within marshes affect the overall structure and subsequent function for fisheries species. We propose a future research agenda that provides both the consistent collection and reporting of sources of variation in small-scale studies and collaborative networks running parallel studies across large scales and geographically distinct locations to provide analogous information for data poor locations. These comparisons are needed to identify and prioritize restoration or conservation efforts, identify sources of variation among regions, and best manage fisheries and food resources across the globe

A Tunable Lyot Filter at Prime Focus: a Method for Tracing Supercluster Scales at z ~ 1

Tunable narrow-band, emission-line surveys have begun to show the ease with which star forming galaxies can be identified in restricted redshift intervals to z ~ 5 with a 4m class telescope. These surveys have been carried out with imaging systems at the Cassegrain or Nasmyth focus and are therefore restricted to fields smaller than 10 arcmin. We now show that tunable narrowband imaging is possible over a 30 arcmin field with a high-performance Lyot filter placed directly in front of a CCD mosaic at the prime focus. Our design is intended for the f/3.3 prime focus of the AAT 3.9m, although similar devices can be envisaged for the Subaru 8m (f/2), Palomar 5m (f/3.4), VISTA 4m (f/6), Mayall 4m (f/2.6) or CFHT 3.6m (f/4). A modified Wynne doublet ensures sub-arcsecond performance over the field. In combination with the new Wide-Field Imaging 8K x 8K mosaic (WFI) at the AAT, the overall throughput (35%) of the system to unpolarised light is expected to be comparable to the TAURUS Tunable Filter (TTF). Unlike the TTF, the field is fully monochromatic and the instrumental profile has much better wing suppression. For targetted surveys of emission-line sources at z ~ 1, a low-resolution (R ~ 150 at 550nm) Lyot filter on a 4m telescope is expected to be comparable or superior to current instruments on 8-10m class telescopes. We demonstrate that the 30 arcmin field is well matched to superclusters at these redshifts such that large-scale structure should be directly observable.Comment: Astrophysical Journal, accepted. 53 pages, 16 figures, aaste