A convergent synthetic route to the tunicamycin antibiotics. Synthesis of (+)-tunicamycin V

The tunicamycins are a family of natural products represented generally by structure 1, wherein R indicates one of several long-chain branched, linear, saturated or unsaturated acyl substituents. They elicit a considerable range of biological responses including antimicrobial, antifungal, antiviral, and antitumor activities. Their ability to function as potent inhibitors of oligosaccharide synthesis in eukaryotic cells has established them as unique biochemical probes of the role of glycosylation on protein structure and function. In this work, we describe a concise synthetic route to the tunicamycins, illustrated by the preparation of (+)-tunicamycin V (1-V)

The distribution of pelagic sound scattering layers across the southwest Indian Ocean

Ship of Opportunity Data were sourced from the Integrated Marine Observing System (IMOS)—an initiative of the Australian Government being conducted as part of the National Collaborative Research Infrastructure Strategy and the Super Science Initiative. Other acoustic data were collected as part of the Southwest Indian Ocean Seamounts Project (http://www.iucn.org/marine/seamounts) which was supported supported by the EAF Nansen Project, the Food and Agriculture Organization of the United Nations, the Global Environment Facility, the International Union for the Conservation of Nature, the Natural Environment Research Council (Grant NE/F005504/1), the Leverhulme Trust (Grant F00390C) and the Total Foundation. We thank the Masters, officers, crews and science parties of cruises DFN 2009-410 and JCO66/67 for their assistance during echosounder calibration and data acquisition, and two anonymous reviewers for their comments. PHBS was supported by the German National Academic Foundation, a Cusanuswerk doctoral fellowship, and a Lesley & Charles Hilton-Brown Scholarship.Shallow and deep scattering layers (SLs) were surveyed with split-beam echosounders across the southwest Indian Ocean (SWIO) to investigate their vertical and geographical distribution. Cluster analysis was employed to objectively classify vertical backscatter profiles. Correlations between backscatter and environmental covariates were modelled using generalized additive mixed models (GAMMs) with spatial error structures. Structurally distinct SL regimes were found across the Subantarctic Front. GAMMs indicated a close relationship between sea surface temperature and mean volume backscatter, with significantly elevated backscatter in the subtropical convergence zone. The heterogeneous distribution of scattering layer biota reflects the biogeographic zonation of the survey area and is likely to have implications for predator foraging and carbon cycling in the Indian Ocean.PostprintPeer reviewe

Manufacture of Compliant Prosthesis Sockets using Selective Laser Sintering 565

Solid Freeform Fabrication to date has largely been applied in prototype fabrication or fabrication of patterns for conventional manufacturing methods. However, many opportunities exist for using SFF for manufacturing the actual product. In particular, those applications that require or can be enhanced by custom geometric design seem to be well suited for SFF techniques. In this paper we describe the design of a prosthesis socket for a below-the-knee amputee. This socket is specifically designed to provide compliance in selected areas to enhance the comfort of the wearer. Additionally, the socket contains an integrated pylon fitting that provides a structurally superior connection while also improving the comfort of the wearer. The socket was manufactured using selective laser sintering, mated to a pylon and foot, and fitted to the patient for gait analysis. The results of the analysis indicate an improved fit is possible with manufacture by SLS.The authors acknowledge the support of the Veterans Administration for partial support of this work.Mechanical Engineerin

Global data for ecology and epidemiology: a novel algorithm for temporal Fourier processing MODIS data

Background. Remotely-sensed environmental data from earth-orbiting satellites are increasingly used to model the distribution and abundance of both plant and animal species, especially those of economic or conservation importance. Time series of data from the MODerate-resolution Imaging Spectroradiometer (MODIS) sensors on-board NASA's Terra and Aqua satellites offer the potential to capture environmental thermal and vegetation seasonality, through temporal Fourier analysis, more accurately than was previously possible using the NOAA Advanced Very High Resolution Radiometer (AVHRR) sensor data. MODIS data are composited over 8- or 16-day time intervals that pose unique problems for temporal Fourier analysis. Applying standard techniques to MODIS data can introduce errors of up to 30% in the estimation of the amplitudes and phases of the Fourier harmonics. Methodology/Principal Findings. We present a novel spline-based algorithm that overcomes the processing problems of composited MODIS data. The algorithm is tested on artificial data generated using randomly selected values of both amplitudes and phases, and provides an accurate estimate of the input variables under all conditions. The algorithm was then applied to produce layers that capture the seasonality in MODIS data for the period from 2001 to 2005. Conclusions/Significance. Global temporal Fourier processed images of 1 km MODIS data for Middle Infrared Reflectance, day- and night-time Land Surface Temperature (LST), Normalised Difference Vegetation Index (NDVI), and Enhanced Vegetation Index (EVI) are presented for ecological and epidemiological applications. The finer spatial and temporal resolution, combined with the greater geolocational and spectral accuracy of the MODIS instruments, compared with previous multi-temporal data sets, mean that these data may be used with greater confidence in species' distribution modelling

Observation of playa salts as nuclei in orographic wave clouds

During the Ice in Clouds Experiment-Layer Clouds (ICE-L), dry lakebed, or playa, salts from the Great Basin region of the United States were observed as cloud nuclei in orographic wave clouds over Wyoming. Using a counterflow virtual impactor in series with a single-particle mass spectrometer, sodium-potassium-magnesium-calcium-chloride salts were identified as residues of cloud droplets. Importantly, these salts produced similar mass spectral signatures to playa salts with elevated cloud condensation nuclei (CCN) efficiencies close to sea salt. Using a suite of chemical characterization instrumentation, the playa salts were observed to be internally mixed with oxidized organics, presumably produced by cloud processing, as well as carbonate. These salt particles were enriched as residues of large droplets (>19 μm) compared to smaller droplets (>7 μm). In addition, a small fraction of silicate-containing playa salts were hypothesized to be important in the observed heterogeneous ice nucleation processes. While the high CCN activity of sea salt has been demonstrated to play an important role in cloud formation in marine environments, this study provides direct evidence of the importance of playa salts in cloud formation in continental North America has not been shown previously. Studies are needed to model and quantify the impact of playas on climate globally, particularly because of the abundance of playas and expected increases in the frequency and intensity of dust storms in the future due to climate and land use changes

Validation and Calibration of Models for Reaction-Diffusion Systems

Space and time scales are not independent in diffusion. In fact, numerical simulations show that different patterns are obtained when space and time steps ($\Delta x$ and $\Delta t$) are varied independently. On the other hand, anisotropy effects due to the symmetries of the discretization lattice prevent the quantitative calibration of models. We introduce a new class of explicit difference methods for numerical integration of diffusion and reaction-diffusion equations, where the dependence on space and time scales occurs naturally. Numerical solutions approach the exact solution of the continuous diffusion equation for finite $\Delta x$ and $\Delta t$, if the parameter $\gamma_N=D \Delta t/(\Delta x)^2$ assumes a fixed constant value, where $N$ is an odd positive integer parametrizing the alghorithm. The error between the solutions of the discrete and the continuous equations goes to zero as $(\Delta x)^{2(N+2)}$ and the values of $\gamma_N$ are dimension independent. With these new integration methods, anisotropy effects resulting from the finite differences are minimized, defining a standard for validation and calibration of numerical solutions of diffusion and reaction-diffusion equations. Comparison between numerical and analytical solutions of reaction-diffusion equations give global discretization errors of the order of $10^{-6}$ in the sup norm. Circular patterns of travelling waves have a maximum relative random deviation from the spherical symmetry of the order of 0.2%, and the standard deviation of the fluctuations around the mean circular wave front is of the order of $10^{-3}$.Comment: 33 pages, 8 figures, to appear in Int. J. Bifurcation and Chao

Building consumer understanding by utilizing a Bayesian hierarchical structure within the behavioral perspective model

This study further develops the theoretical and empirical literature on the Behavioral Perspective Model (BPM) in three ways through an empirical analysis of the Great Britain (GB) biscuit category. First, following a literature review and a category analysis, a more complex model is constructed using the BPM structure and then testing the hypothesis uncovered. Second, the structure of the data theoretically calls for a hierarchical structure of the model, and hence, this is introduced into the BPM framework and is compared to a non-hierarchical structure of the same model. Finally, a discussion is undertaken on the advantages of a Bayesian approach to calculating parameter inference. Two models are built by utilizing vague and informed prior distributions respectively, and the results are compared. This study shows the importance of building appropriate model structures for analysis and demonstrates the advantages and challenges of utilizing a Bayesian approach. It also further demonstrates the BPM’s suitability as a vehicle to better understand consumer behavio

Seamount influences on mid-water shrimps (Decapoda) and Gnathophausiids (Lophogastridea) of the South-West Indian ridge

This study was conducted under the UNDP/IUCN project, funded by the Global Environment Facility (GEF). The authors thank the School of Biology at the University of St Andrews and the National Environmental Research Council (NERC) for funding toward Tom B Letessier's PhD.Maintenance of often-observed elevated levels of pelagic diversity and biomass on seamounts, that are of relevance to conservation and fishery management, involves complex interactions between physical and biological variables that remain poorly understood. To untangle these biophysical processes we explore factors influencing the distribution of epi- and meso-pelagic (0–1000 m) micronektonic crustaceans (>15 mm; order Lophogastridea, family Gnathophausiidea; and order Decapoda) on and off seamounts along the South West Indian Ridge (SWIR, 27° to 42°S) and on a seamount off the Madagascar Ridge (31.6°S, 42.8°E). Thirty-one species of micronektic crustaceans were caught using mid-water trawls within the study are but there was no apparent latitude-related patterns in species richness or abundance. Species richness predicted by rarefraction curves and numerical abundance was highest in the vicinity (800 m). The dominant species assemblage comprised the shrimps Systellaspis debilis (37%) and Sergia prehensilis (34%), and was restricted to seamounts on the subtropical SWIR. Our observations suggest that the ‘oasis effect’ of seamounts conventionally associated with higher trophic levels is also applicable to pelagic micronektic crustaceans at lower trophic levels. We suggest that the enhanced biomass and species richness attributed is due to ‘habitat enrichment’, whereby seamounts provide favourable habitats for both pelagic and bentho-pelagic mid-water crustaceans.PostprintPeer reviewe