Network growth model with intrinsic vertex fitness

© 2013 American Physical SocietyWe study a class of network growth models with attachment rules governed by intrinsic node fitness. Both the individual node degree distribution and the degree correlation properties of the network are obtained as functions of the network growth rules. We also find analytical solutions to the inverse, design, problems of matching the growth rules to the required (e.g., power-law) node degree distribution and more generally to the required degree correlation function. We find that the design problems do not always have solutions. Among the specific conditions on the existence of solutions to the design problems is the requirement that the node degree distribution has to be broader than a certain threshold and the fact that factorizability of the correlation functions requires singular distributions of the node fitnesses. More generally, the restrictions on the input distributions and correlations that ensure solvability of the design problems are expressed in terms of the analytical properties of their generating functions

A molecular perspective on the limits of life: Enzymes under pressure

From a purely operational standpoint, the existence of microbes that can grow under extreme conditions, or "extremophiles", leads to the question of how the molecules making up these microbes can maintain both their structure and function. While microbes that live under extremes of temperature have been heavily studied, those that live under extremes of pressure have been neglected, in part due to the difficulty of collecting samples and performing experiments under the ambient conditions of the microbe. However, thermodynamic arguments imply that the effects of pressure might lead to different organismal solutions than from the effects of temperature. Observationally, some of these solutions might be in the condensed matter properties of the intracellular milieu in addition to genetic modifications of the macromolecules or repair mechanisms for the macromolecules. Here, the effects of pressure on enzymes, which are proteins essential for the growth and reproduction of an organism, and some adaptations against these effects are reviewed and amplified by the results from molecular dynamics simulations. The aim is to provide biological background for soft matter studies of these systems under pressure.Comment: 16 pages, 8 figure

A solar cycle of spacecraft anomalies due to internal charging

International audienceIt is important to appreciate how the morphology of internal charging of spacecraft systems, due to penetrating electrons, differs from that of the more common surface charging, due to electrons with lower energy. A specific and recurrent anomaly on a geostationary communication satellite has been tracked for ten years so that solar cycle and seasonal dependencies can be clearly established. Concurrent measurements of sunspot number, solar wind speed and 2-day >2 MeV electron fluence are presented to highlight pertinent space weather relationships, and the importance of understanding the complex particle interaction processes involved

Spin Glass Phase Transition on Scale-Free Networks

We study the Ising spin glass model on scale-free networks generated by the static model using the replica method. Based on the replica-symmetric solution, we derive the phase diagram consisting of the paramagnetic (P), ferromagnetic (F), and spin glass (SG) phases as well as the Almeida-Thouless line as functions of the degree exponent $\lambda$, the mean degree $K$, and the fraction of ferromagnetic interactions $r$. To reflect the inhomogeneity of vertices, we modify the magnetization $m$ and the spin glass order parameter $q$ with vertex-weights. The transition temperature $T_c$ ($T_g$) between the P-F (P-SG) phases and the critical behaviors of the order parameters are found analytically. When $2 < \lambda < 3$, $T_c$ and $T_g$ are infinite, and the system is in the F phase or the mixed phase for $r > 1/2$, while it is in the SG phase at $r=1/2$. $m$ and $q$ decay as power-laws with increasing temperature with different $\lambda$-dependent exponents. When $\lambda > 3$, the $T_c$ and $T_g$ are finite and related to the percolation threshold. The critical exponents associated with $m$ and $q$ depend on $\lambda$ for $3 < \lambda < 5$ ($3 < \lambda < 4$) at the P-F (P-SG) boundary.Comment: Phys. Rev. E in pres

Kinetics of catalysis with surface disorder

We study the effects of generalised surface disorder on the monomer-monomer model of heterogeneous catalysis, where disorder is implemented by allowing different adsorption rates for each lattice site. By mapping the system in the reaction-controlled limit onto a kinetic Ising model, we derive the rate equations for the one and two-spin correlation functions. There is good agreement between these equations and numerical simulations. We then study the inclusion of desorption of monomers from the substrate, first by both species and then by just one, and find exact time-dependent solutions for the one-spin correlation functions.Comment: LaTex, 19 pages, 1 figure included, requires epsf.st

Probable Gravitational Microlensing towards the Galatic Bulge

The MACHO project carries out regular photometric monitoring of millions of stars in the Magellanic Clouds and Galactic Bulge, to search for very rare gravitational microlensing events due to compact objects in the galactic halo and disk. A preliminary analysis of one field in the Galactic Bulge, containing {$\sim430,000$} stars observed for 190 days, reveals four stars which show clear evidence for brightenings which are time-symmetric, achromatic in our two passbands, and have shapes consistent with gravitational microlensing. This is significantly higher than the $\sim 1$ event expected from microlensing by known stars in the disk. If all four events are due to microlensing, a 95\% confidence lower limit on the optical depth towards our bulge field is $1.3 \times 10^{-6}$, and a ``best fit" value is $\tau \approx 1.6 \times 10^{-6}/\epsilon$,where $\epsilon$ is the detection efficiency of the experiment, and $\epsilon < 0.4$. If the true optical depth is close to the ``best fit" value, possible explanations include a ``maximal" disk which accounts for most of the galactic circular velocity at the solar radius, a halo which is centrally concentrated, or bulge-bulge microlensing.Comment: submitted to Astrophysical Journal Letters, 10 pages text as uuencoded compressed PostScript, 5 figures and paper also available via anonymous ftp from merlin.anu.edu.au in /pub/kcf/mach

Technical Note: Impact of nonlinearity on changing the a priori of trace gas profiles estimates from the Tropospheric Emission Spectrometer (TES)

International audienceNon-linear optimal estimates of atmospheric profiles from the Tropospheric Emission Spectrometer (TES) may contain a priori information that varies geographically, which is a confounding factor in the analysis and physical interpretation of an ensemble of profiles. A common strategy is to transform these profile estimates to a common prior using a linear operation thereby facilitating the interpretation of profile variability. However, this operation is dependent on the assumption of not worse than moderate non-linearity near the solution of the non-linear estimate. We examines the robustness of this assumption when exchanging the prior by comparing atmospheric retrievals from the Tropospheric Emission Spectrometer processed with a uniform prior with those processed with a variable prior and converted to a uniform prior following the non-linear retrieval. We find that linearly converting the prior following a non-linear retrieval is shown to have a minor effect on the results as compared to a non-linear retrieval using a uniform prior when compared to the expected total error, with less than 10% of the change in the prior ending up as unbiased fluctuations in the profile estimate results