Chemical Characteristics, Provenance Determination and Genesis Conditions of Clay Deposits of Kahrizak Formation (Early-Late Pleistocene), East of Tehran, Iran

The Early-Late Pleistocene deposits in South-East of Tehran (Kahrizak Formation) consist of gravel, sand and clay facies which are related to alluvial fan deposits. The XRD analysis on fine grained deposits of the formation indicated the existence of clay minerals including montmorillonite, illite and chlorite; also quartz, calcite and anorthite are present as the minor components. We determined provenance and paleoclimate condition of the deposits based on clay minerals type. Montmorillonite and illite were used as the provenance indicator showing volcanic rock as the source rock. All clay minerals indicate low to moderate leaching in temperate to cold climatic setting. Their ICV values are >1 indicating negligible recycling or weathering of the clays. K2O/ Al2O3<0.4 and ternary plot of CaO+Na2O-Al2O3-KO2 suggests the deposits compositions same as basalt. Also that displays weathering trend. Low ICV values of the deposits exhibit low to intermediate degree of weathering for the parental rock. Based on Bhatia diagram, using DF1 and DF2and K2O/Na2O versus SiO2, its tectonic setting was determined as being active continental margin

Identification of novel genes involved in gastric carcinogenesis by suppression subtractive hybridization

Gastric cancer (GC) is one of the most common and life-threatening types of malignancies. Identification of the differentially expressed genes in GC is one of the best approaches for establishing new diagnostic and therapeutic targets. Furthermore, these investigations could advance our knowledge about molecular biology and the carcinogenesis of this cancer. To screen for the overexpressed genes in gastric adenocarcinoma, we performed suppression subtractive hybridization (SSH) on gastric adenocarcinoma tissue and the corresponding normal gastric tissue, and eight genes were found to be overexpressed in the tumor compared with those of the normal tissue. The genes were ribosomal protein L18A, RNase H2 subunit B, SEC13, eukaryotic translation initiation factor 4A1, tetraspanin 8, cytochrome c oxidase subunit 2, NADH dehydrogenase subunit 4, and mitochondrially encoded ATP synthase 6. The common functions among the identified genes include involvement in protein synthesis, involvement in genomic stability maintenance, metastasis, metabolic improvement, cell signaling pathways, and chemoresistance. Our results provide new insights into the molecular biology of GC and drug discovery: each of the identified genes could be further investigated as targets for prognosis evaluation, diagnosis, treatment, evaluation of the response to new anticancer drugs, and determination of the molecular pathogenesis of GC. © The Author(s) 2014

Genome expression analysis by suppression subtractive hybridization identified overexpression of Humanin, a target gene in gastric cancer chemoresistance

Background: In cancer cells, apoptosis is an important mechanism that influences the outcome of chemotherapy and the development of chemoresistance. To find the genes involved in chemoresistance and the development of gastric cancer, we used the suppression subtractive hybridization method to identify the genes that are overexpressed in gastric cancer tissues compared to normal gastric tissues. Results: In the suppression subtractive hybridization library we constructed, the most highly overexpressed genes were humanin isoforms. Humanin is a recently identified endogenous peptide that has anti-apoptotic activity and has been selected for further study due to its potential role in the chemoresistance of gastric cancer. Upregulation of humanin isoforms was also observed in clinical samples by using quantitative real-time PCR. Among the studied isoforms, humanin isoform 3, with an expression level of 4.166 ± 1.44 fold, was the most overexpressed isoform in GC. Conclusions: The overexpression of humanin in gastric cancer suggests a role for chemoresistance and provides new insight into the biology of gastric cancer. We propose that humanin isoforms are novel targets for combating chemoresistance in gastric cancer. © 2014 Mottaghi-Dastjerdi et al.; licensee BioMed Central Ltd

A new approach in petrophysical rock typing

Petrophysical rock typing in reservoir characterization is an important input for successful drilling, production, injection, reservoir studies and simulation. In this study petrophysical rock typing is divided into two major categories: 1) a petrophysical static rock type (PSRT): a collection of rocks having the same primary drainage capillary pressure curves or unique water saturation for a given height above the free water level, 2) a petrophysical dynamic rock type (PDRT): a set of rocks with a similar fluid flow behavior. It was shown that static and dynamic rock types do not necessarily overlap or share petrophysical properties, regardless of wettability. In addition, a new index is developed to define PDRTs via the Kozeny-Carman equation and Darcy's law. We also proposed a different index for delineation of PSRTs by combining the Young–Laplace capillary pressure expression and the Kozeny-Carman equation. These new indices were compared with the existing theoretical and empirical indices. Results showed that our indices are representatives of previously developed models which were also tested with mercury injection capillary pressure, water-oil primary drainage capillary pressure, and water-oil relative permeability data on core plugs from a highly heterogeneous carbonate reservoir in an Iranian oil field. This study enabled us to modify the conventional J-function to enhance its capability of normalizing capillary pr essure data universally

Requirements towards Effective Process Mining

Process mining is prominent contemporary research topic. This paper describes requirements to be fulfilled for effective practical adoption on the basis of application scenarios and a sample project

Clinicopathological significance of tumor stem cell markers aldh1 and CD133 in colorectal carcinoma

Background & Objective: Colorectal cancer (CRC) is the third most common cancer worldwide with a high mortality rate. The main causes of death in patients are recurrence and metastasis which are mainly attributed to the small subpopulation of cells within tumors called cancer stem cells (CSCs). This study aimed to evaluate the correlation between the expression of ALDH1 and CD133 as CSC associated markers and clinicopathological characteristics in CRC. Methods: In this cross-sectional study, a total of 483 CRC tumor samples were immunohistochemically stained for detection of CD133 and ALDH1 markers. Correlations of marker expression with clinicopathological factors were also evaluated. Results: There was a significant correlation between the luminal intensity of CD133 and neural invasion (P=0.05) and between the cytoplasmic intensity of CD133 and metastasis (P=0.05). In terms of H-score, a positive significant relation was observed between cytoplasmic expression of CD133 and lymph node (P=0.02), neural (P=0.04) and vascular invasion (P=0.02). The ALDH1 cytoplasmic expression showed a significant correlation with tumor size (P=0.001). Conclusion: Our findings showed that increased expression of CD133 and ALDH1 is associated with tumor progression and worse outcomes in CRC patients. These markers can be good candidates for localized targeting of CSCs using antibodies. Future researches need to be improved approaches for early detection of CRC, and treatment monitoring for CRC and other cancers. © 2021, Iranian Society of Pathology. All rights reserved

Curcumin: A new candidate for melanoma therapy?

Melanoma remains among the most lethal cancers and, in spite of great attempts that have been made to increase the life span of patients with metastatic disease, durable and complete remissions are rare. Plants and plant extracts have long been used to treat a variety of human conditions; however, in many cases, effective doses of herbal remedies are associated with serious adverse effects. Curcumin is a natural polyphenol that shows a variety of pharmacological activities including anti-cancer effects, and only minimal adverse effects have been reported for this phytochemical. The anti-cancer effects of curcumin are the result of its anti-angiogenic, pro-apoptotic and immunomodulatory properties. At the molecular and cellular level, curcumin can blunt epithelial-to-mesenchymal transition and affect many targets that are involved in melanoma initiation and progression (e.g., BCl2, MAPKS, p21 and some microRNAs). However, curcumin has a low oral bioavailability that may limit its maximal benefits. The emergence of tailored formulations of curcumin and new delivery systems such as nanoparticles, liposomes, micelles and phospholipid complexes has led to the enhancement of curcumin bioavailability. Although in vitro and in vivo studies have demonstrated that curcumin and its analogues can be used as novel therapeutic agents in melanoma, curcumin has not yet been tested against melanoma in clinical practice. In this review, we summarized reported anti-melanoma effects of curcumin as well as studies on new curcumin formulations and delivery systems that show increased bioavailability. Such tailored delivery systems could pave the way for enhancement of the anti-melanoma effects of curcumin. © 2016 UIC

Atherosclerosis in patients with endometriosis

Endometriosis refers to endometrial tissue implantation including stromal and epithelial tissue outside the uterus. It is an often painful disorder that involves the ovaries and fallopian tubes. The association between endometriosis and atherosclerosis is interesting. The present study was conducted to assess the Doppler findings of the carotid artery in patients with and without endometriosis. In this study that included 30 patients with endometriosis and 30 control subjects, all patients underwent carotid ultrasonography, and the measurement of intima-media thickness (IMT) was done in the distal common carotid artery, proximal to the origin of the carotid bulb, and finally, we compare the IMT in two groups. This study revealed that there are no differences in the IMT between patients with and without Endometriosis. © Copyright A.H. Habibi, et al., 2019

Finite quantum tomography via semidefinite programming

Using the the convex semidefinite programming method and superoperator formalism we obtain the finite quantum tomography of some mixed quantum states such as: qudit tomography, N-qubit tomography, phase tomography and coherent spin state tomography, where that obtained results are in agreement with those of References \cite{schack,Pegg,Barnett,Buzek,Weigert}.Comment: 25 page