Household fish preparation hygiene and cholera transmission in Monrovia, Liberia.

BACKGROUND: In the 1980s Vibrio cholerae was found to be an autochthonous resident of aquatic environments. As result, ingestion of undercooked, contaminated fish has been associated with cholera transmission. An alternative mechanism of transmission associated with fish was hypothesised by Schürmann et al. in 2002. He described a cholera case that was more likely to have been infected by contamination on the patient's hands rather than by ingestion of contaminated fish. METHODOLOGY: With fish being the main diet in Liberia, we decided to examine fish samples and preparation techniques in Monrovia. Excreta of 15 fish, caught in the estuarine waters of Monrovia, were analysed for V. cholerae. In addition, fish preparation methods were observed in 30 households. RESULTS: Two fish samples were found positive. Observations revealed that hygiene measures during the gutting process of fish were limited; although hands were usually rinsed, in all cases soap was not used. Furthermore, contaminated water was frequently reused during food preparation. CONCLUSIONS: Since the cooking process of fish (and thus elimination of bacteria) in Monrovia usually consists of both frying and boiling, it seems plausible that in this context, the hypothesis by Schürmann et al. could be applicable. Further research is necessary to confirm this association, which could be a starting point for more context-specific health education campaigns addressing food preparation hygiene as risk factor for cholera

Spatial expansion and speeds of type III electron beam sources in the solar corona

A component of space weather, electron beams are routinely accelerated in the solar atmosphere and propagate through interplanetary space. Electron beams interact with Langmuir waves resulting in type III radio bursts. Electron beams expand along the trajectory, and using kinetic simulations, we explore the expansion as the electrons propagate away from the Sun. Specifically, we investigate the front, peak and back of the electron beam in space from derived radio brightness temperatures of fundamental type III emission. The front of the electron beams travelled at speeds from 0.2c--0.7c, significantly faster than the back of the beam that travelled between 0.12c--0.35c. The difference in speed between the front and the back elongates the electron beams in time. The rate of beam elongation has a 0.98 correlation coefficient with the peak velocity; in-line with predictions from type III observations. The inferred speeds of electron beams initially increase close to the acceleration region and then decrease through the solar corona. Larger starting densities and harder initial spectral indices result in longer and faster type III sources. Faster electron beams have higher beam energy densities, produce type IIIs with higher peak brightness temperatures and shorter FWHM durations. Higher background plasma temperatures also increase speeds, particularly at the back of the beam. We show how our predictions of electron beam evolution influences type III bandwidth and drift-rates. Our radial predictions of electron beam speed and expansion can be tested by the upcoming in situ electron beam measurements made by Solar Orbiter and Parker Solar Probe.Comment: 19 pages, 20 figures, submitted to Ap

Stopping Frequency of Type III Solar Radio Bursts in Expanding Magnetic Flux Tubes

Understanding the properties of type III radio bursts in the solar corona and interplanetary space is one of the best ways to remotely deduce the characteristics of solar accelerated electron beams and the solar wind plasma. One feature of all type III bursts is the lowest frequency they reach (or stopping frequency). This feature reflects the distance from the Sun that an electron beam can drive the observable plasma emission mechanism. The stopping frequency has never been systematically studied before from a theoretical perspective. Using numerical kinetic simulations, we explore the different parameters that dictate how far an electron beam can travel before it stops inducing a significant level of Langmuir waves, responsible for plasma radio emission. We use the quasilinear approach to model self-consistently the resonant interaction between electrons and Langmuir waves in inhomogeneous plasma, and take into consideration the expansion of the guiding magnetic flux tube and the turbulent density of the interplanetary medium. We find that the rate of radial expansion has a significant effect on the distance an electron beam travels before enhanced leves of Langmuir waves, and hence radio waves, cease. Radial expansion of the guiding magnetic flux tube rarefies the electron stream to the extent that the density of non-thermal electrons is too low to drive Langmuir wave production. The initial conditions of the electron beam have a significant effect, where decreasing the beam density or increasing the spectral index of injected electrons would cause higher type III stopping frequencies. We also demonstrate how the intensity of large-scale density fluctuations increases the highest frequency that Langmuir waves can be driven by the beam and how the magnetic field geometry can be the cause of type III bursts only observed at high coronal frequencies.Comment: 11 pages, 8 figures, accepted in Astronomy and Astrophysic

Imaging Spectroscopy of Type U and J Solar Radio Bursts with LOFAR

Radio U-bursts and J-bursts are signatures of electron beams propagating along magnetic loops confined to the corona. The more commonly observed type III radio bursts are signatures of electron beams propagating along magnetic loops that extend into interplanetary space. Given the prevalence of solar magnetic flux to be closed in the corona, it is an outstanding question why type III bursts are more frequently observed than U-bursts or J-bursts. We use LOFAR imaging spectroscopy between 30-80 MHz of low-frequency U-bursts and J-bursts, for the first time, to understand why electron beams travelling along coronal loops produce radio emission less often. The different radio source positions were used to model the spatial structure of the guiding magnetic flux tube and then deduce the energy range of the exciting electron beams without the assumption of a standard density model. The radio sources infer a magnetic loop 1 solar radius in altitude, with the highest frequency sources starting around 0.6 solar radii. Electron velocities were found between 0.13 c and 0.24 c, with the front of the electron beam travelling faster than the back of the electron beam. The velocities correspond to energy ranges within the beam from 0.7-11 keV to 0.7-43 keV. The density along the loop is higher than typical coronal density models and the density gradient is smaller. We found that a more restrictive range of accelerated beam and background plasma parameters can result in U-bursts or J-bursts, causing type III bursts to be more frequently observed. The large instability distances required before Langmuir waves are produced by some electron beams, and the small magnitude of the background density gradients make closed loops less facilitating for radio emission than loops that extend into interplanetary space.Comment: 9 pages, 7 figure

Langmuir Wave Electric Fields Induced by Electron Beams in the Heliosphere

Solar electron beams responsible for type III radio emission generate Langmuir waves as they propagate out from the Sun. The Langmuir waves are observed via in-situ electric field measurements. These Langmuir waves are not smoothly distributed but occur in discrete clumps, commonly attributed to the turbulent nature of the solar wind electron density. Exactly how the density turbulence modulates the Langmuir wave electric fields is understood only qualitatively. Using weak turbulence simulations, we investigate how solar wind density turbulence changes the probability distribution functions, mean value and variance of the beam-driven electric field distributions. Simulations show rather complicated forms of the distribution that are dependent upon how the electric fields are sampled. Generally the higher magnitude of density fluctuations reduce the mean and increase the variance of the distribution in a consistent manor to the predictions from resonance broadening by density fluctuations. We also demonstrate how the properties of the electric field distribution should vary radially from the Sun to the Earth and provide a numerical prediction for the in-situ measurements of the upcoming Solar Orbiter and Solar Probe Plus spacecraft.Comment: 14 pages, 11 figures, published in Astronomy and Astrophysic

Alfv\'en waves in simulations of solar photospheric vortices

Using advanced numerical magneto-hydrodynamic simulations of the magnetised solar photosphere, including non-grey radiative transport and a non-ideal equation of state, we analyse plasma motions in photospheric magnetic vortices. We demonstrate that apparent vortex-like motions in photospheric magnetic field concentrations do not exhibit "tornado"-like behaviour or a "bath-tub" effect. While at each time instance the velocity field lines in the upper layers of the solar photosphere show swirls, the test particles moving with the time-dependent velocity field do not demonstrate such structures. Instead, they move in a wave-like fashion with rapidly changing and oscillating velocity field, determined mainly by magnetic tension in the magnetised intergranular downflows. Using time-distance diagrams, we identify horizontal motions in the magnetic flux tubes as torsional Alfv\'en perturbations propagating along the nearly vertical magnetic field lines with local Alfv\'en speed.Comment: 5 pages, 4 figures, accepted to ApJ

The Low-High-Low Trend of Type III Radio Burst Starting Frequencies and Solar Flare Hard X-rays

Using simultaneous X-ray and radio observations from solar flares, we investigate the link between the type III radio burst starting frequency and hard X-ray spectral index. For a proportion of events the relation derived between the starting height (frequency) of type III radio bursts and the electron beam velocity spectral index (deduced from X-rays) is used to infer the spatial properties (height and size) of the electron beam acceleration region. Both quantities can be related to the distance travelled before an electron beam becomes unstable to Langmuir waves. To obtain a list of suitable events we considered the RHESSI catalogue of X-ray flares and the Phoenix 2 catalogue of type III radio bursts. From the 200 events that showed both type III and X-ray signatures, we selected 30 events which had simultaneous emission in both wavelengths, good signal to noise in the X-ray domain and > 20 seconds duration. We find that > 50 % of the selected events show a good correlation between the starting frequencies of the groups of type III bursts and the hard X-ray spectral indices. A low-high-low trend for the starting frequency of type III bursts is frequently observed. Assuming a background electron density model and the thick target approximation for X-ray observations, this leads to a correlation between starting heights of the type III emission and the beam electron spectral index. Using this correlation we infer the altitude and vertical extents of the flare acceleration regions. We find heights from 183 Mm down to 25 Mm while the sizes range from 13 Mm to 2 Mm. These values agree with previous work that places an extended flare acceleration region high in the corona. We analyse the assumptions required and explore possible extensions to our assumed model. We discuss these results with respect to the acceleration heights and sizes derived from X-ray observations alone.Comment: 15 pages, 8 figures, Accepted to Astronomy and Astrophysic

On the Electronic Spectroscopy of Closed Shell Cations Derived From Resonance Stabilized Radicals: Insights From Theory and Franck-Condon Analysis

Context. Recent attention has been directed on closed-shell aromatic cations as potential carriers of the diffuse interstellar bands. The spectra of mass-selected, matrix-isolated benzylium, and tropylium cations were recently reported. The visible spectrum of benzylium exhibits a large Franck-Condon (FC) envelope, inconsistent with diffuse interstellar band carriers. Aims. We perform a computational analysis of the experimentally studied benzylium spectrum before extending the methods to a range of larger, closed-shell aromatic cations to determine the potential for this class of systems as diffuse interstellar band carriers. Methods. Density functional theory (DFT), time-dependant ((TD)DFT), and multi-configurational self-consistent field second-order perturbation theory (MRPT2) methods in concert with multidimensional FC analysis is used to model the benzylium spectrum. These methods are extended to larger closed-shell aromatic hydrocarbon cations derived from resonance-stabilized radicals, which are predicted to show strong S0 → Sn transitions in the visible region. The ionization energies of a range of these systems are also calculated by DFT. Results. The simulated benzylium spectrum was found to yield excellent agreement with the experimental spectrum showing an extended progression in a low frequency (510 cm-1) ring distortion mode. The FC progression was found to be significantly quenched in the larger species: 1-indanylium, 1-naphthylmethylium, and fluorenium. Excitation and ionization energies of the closed-shell cations were found to be consistent with diffuse interstellar band carriers, with the former lying in the visible range and the latter straddling the Lyman limit in the 13−14 eV range. Conclusions. Large closed-shell polycyclic aromatic hydrocarbon cations remain viable candidate carriers of the diffuse interstellar bands