Opportunities for Dutch Biorefineries

Deze Roadmap Bioraffinage beschrijft een aantal mogelijke routes naar de ontwikkeling en implementatie van een bioraffinage-gerelateerde Bio-based Economy in Nederland. De Roadmap combineert korte- en middellange termijn mogelijkheden (commerciële implementatie, demonstratie plants, pilot plants en gerelateerd toegepast onderzoek) met strategisch onderzoek voor de langere termijn. Tevens zijn vier z.g. Moonshots uitgewerkt, als voorziene bioraffinagestrategieën met een grote potentie voor de Nederlandse economi

Financieel-economische aspecten van Biobrandstofproductie : deskstopstudie naar de invloed van co-productie van bio-based producten op de financiële haalbaarheid van biobrandstoffen

Door uitvoering van een deskstop studie heeft WUR, in samenwerking met ECN, onderzocht of co-productie van biobrandstoffen en bio-based producten leidt tot meer marktcompetitieve biobrandstofproductie. De centrale vraagstelling van de studie was of aangetoond kan worden dat “co-productie” resulteert in realisatie van meer marktcompetitieve waardeketens voor grootschalige en duurzame inzet van biomassa in de biobased economy. De studie naar de financiële haalbaarheid van een twaalftal biobrandstofketens laten zien dat co-productie van biobrandstoffen tezamen met bio-based producten een goede methode is om additionele waarde toe te kennen aan de totale biomassa-product-keten. De co-producten die tezamen met biobrandstoffen geproduceerd kunnen worden zijn zeer divers. In het algemeen bestaat er voor deze co-producten een omvangrijke afzetmarkt, en gaat het om producten die op dit moment grotendeels uit aardolie vervaardigd worden. Technologieën voor productie en toepassing van hoogwaardige co-producten die naast biobrandstoffen uit biomassa geproduceerd kunnen worden bevinden zich in verschillende stadia van ontwikkeling

Scattering properties of a cut-circle billiard waveguide with two conical leads

We examine a two-dimensional electron waveguide with a cut-circle cavity and conical leads. By considering Wigner delay times and the Landauer-B\"{u}ttiker conductance for this system, we probe the effects of the closed billiard energy spectrum on scattering properties in the limit of weakly coupled leads. We investigate how lead placement and cavity shape affect these conductance and time delay spectra of the waveguide.Comment: 18 pages, 11 figures, accepted for publication in Phys. Rev. E (Jan. 2001

The effect of phylogeny, environment and morphology on communities of a lianescent clade (Bignonieae-Bignoniaceae) in neotropical biomes

The influence of ecological traits to the distribution and abundance of species is a prevalent issue in biodiversity science. Most studies of plant community assembly have focused on traits related to abiotic aspects or direct interactions among plants, with less attention paid to ignore indirect interactions, as those mediated by pollinators. Here, we assessed the influence of phylogeny, habitat, and floral morphology on ecological community structure in a clade of Neotropical lianas (tribe Bignonieae, Bignoniaceae). Our investigation was guided by the long-standing hypothesis that habitat specialization has promoted speciation in Bignonieae, while competition for shared pollinators influences species co-occurrence within communities. We analyzed a geo-referenced database for 94 local communities occurring across the Neotropics. The effect of floral morphological traits and abiotic variables on species co-occurrence was investigated, taking into account phylogenetic relationships. Habitat filtering seems to be the main process driving community assembly in Bignonieae, with environmental conditions limiting species distributions. Differing specialization to abiotic conditions might have evolved recently, in contrast to the general pattern of phylogenetic clustering found in communities of other diverse regions. We find no evidence that competition for pollinators affects species co-occurrence; instead, pollinator occurrence seems to have acted as an "environmental filter'' in some habitats93FUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULO - FAPESP2006/59916-0CCSD-Missouri Botanical Garden: Elizabeth E. Bascom Fellowships for Latin American Female Botanist

Inferring Phylogenies from RAD Sequence Data

Reduced-representation genome sequencing represents a new source of data for systematics, and its potential utility in interspecific phylogeny reconstruction has not yet been explored. One approach that seems especially promising is the use of inexpensive short-read technologies (e.g., Illumina, SOLiD) to sequence restriction-site associated DNA (RAD) – the regions of the genome that flank the recognition sites of restriction enzymes. In this study, we simulated the collection of RAD sequences from sequenced genomes of different taxa (Drosophila, mammals, and yeasts) and developed a proof-of-concept workflow to test whether informative data could be extracted and used to accurately reconstruct “known” phylogenies of species within each group. The workflow consists of three basic steps: first, sequences are clustered by similarity to estimate orthology; second, clusters are filtered by taxonomic coverage; and third, they are aligned and concatenated for “total evidence” phylogenetic analysis. We evaluated the performance of clustering and filtering parameters by comparing the resulting topologies with well-supported reference trees and we were able to identify conditions under which the reference tree was inferred with high support. For Drosophila, whole genome alignments allowed us to directly evaluate which parameters most consistently recovered orthologous sequences. For the parameter ranges explored, we recovered the best results at the low ends of sequence similarity and taxonomic representation of loci; these generated the largest supermatrices with the highest proportion of missing data. Applications of the method to mammals and yeasts were less successful, which we suggest may be due partly to their much deeper evolutionary divergence times compared to Drosophila (crown ages of approximately 100 and 300 versus 60 Mya, respectively). RAD sequences thus appear to hold promise for reconstructing phylogenetic relationships in younger clades in which sufficient numbers of orthologous restriction sites are retained across species.</p

Power-law distributions from additive preferential redistributions

We introduce a non-growth model that generates the power-law distribution with the Zipf exponent. There are N elements, each of which is characterized by a quantity, and at each time step these quantities are redistributed through binary random interactions with a simple additive preferential rule, while the sum of quantities is conserved. The situation described by this model is similar to those of closed $N$-particle systems when conservative two-body collisions are only allowed. We obtain stationary distributions of these quantities both analytically and numerically while varying parameters of the model, and find that the model exhibits the scaling behavior for some parameter ranges. Unlike well-known growth models, this alternative mechanism generates the power-law distribution when the growth is not expected and the dynamics of the system is based on interactions between elements. This model can be applied to some examples such as personal wealths, city sizes, and the generation of scale-free networks when only rewiring is allowed.Comment: 12 pages, 4 figures; Changed some expressions and notations; Added more explanations and changed the order of presentation in Sec.III while results are the sam

Aharonov-Bohm effect and resonances in the circular quantum billiard with two leads

We calculate the conductance through a circular quantum billiard with two leads and a point magnetic flux at the center. The boundary element method is used to solve the Schrodinger equation of the scattering problem, and the Landauer formula is used to calculate the conductance from the transmission coefficients. We use two different shapes of leads, straight and conic, and find that the conductance is affected by lead geometry, the relative positions of the leads and the magnetic flux. The Aharonov-Bohm effect can be seen from shifts and splittings of fluctuations. When the flux is equal to (h/2e) and the angle between leads is 180 degree, the conductance tends to be suppressed to zero in the low energy range due to the Aharonov-Bohm effect.Comment: LaTeX2e, 8 pages, 6 figures, submitted to Phys. Rev. B (Two references added. A discussion on discrete symmetries removed.

Ninth and Tenth Order Virial Coefficients for Hard Spheres in D Dimensions

We evaluate the virial coefficients B_k for k<=10 for hard spheres in dimensions D=2,...,8. Virial coefficients with k even are found to be negative when D>=5. This provides strong evidence that the leading singularity for the virial series lies away from the positive real axis when D>=5. Further analysis provides evidence that negative virial coefficients will be seen for some k>10 for D=4, and there is a distinct possibility that negative virial coefficients will also eventually occur for D=3.Comment: 33 pages, 12 figure

A Spectro-photometric Search for Galaxy Clusters in SDSS

Recent large-scale galaxy spectroscopic surveys, such as the Sloan Digital Sky Survey (SDSS), enable us to execute a systematic, relatively-unbiased search for galaxy clusters. Such surveys make it possible to measure the 3-d distribution of galaxies but are hampered by the incompleteness problem due to fiber collisions. In this study we aim to develop a density measuring technique that alleviates the problem and derives densities more accurately by adding additional cluster member galaxies that follow optical color-magnitude relations for the given redshift. The new density measured with both spectroscopic and photometric data shows a good agreement with apparent information on cluster images and is supported by follow-up observations. By adopting this new method, a total of 924 $robust$ galaxy clusters are found from the SDSS DR5 database in the redshift range $0.05<z<0.1$, of which 212 are new. Local maximum-density galaxies successfully represent cluster centers. We provide the cluster catalogue including a number of cluster parameters.Comment: Web-page address has been revised and minor corrections are don

Thermal Equation of State of Tantalum

We have investigated the thermal equation of state of tantalum from first principles using the Linearized Augmented Plane Wave (LAPW) and pseudopotential methods for pressures up to 300 GPa and temperatures up to 10000 K. The equation of state at zero temperature was computed using LAPW. For finite temperatures, mixed basis pseudopotential computations were performed for 54 atom supercells. The vibrational contributions were obtained by computing the partition function using the particle in a cell model, and the the finite temperature electronic free energy was obtained from the LAPW band structures. We discuss the behavior of thermal equation of state parameters such as the Gr\"uneisen parameter $\gamma$, $q$, the thermal expansivity $\alpha$, the Anderson-Gr\"uneisen parameter $\delta_T$ as functions of pressure and temperature. The calculated Hugoniot shows excellent agreement with shock-wave experiments. An electronic topological transition was found at approximately 200 GPa