4,114 research outputs found
Effect of nitrogen source upon crude and true protein and VFA's in rumen contents of steers fed finishing rations
Call number: LD2668 .T4 1968 C4468Master of Scienc
A computational framework to emulate the human perspective in flow cytometric data analysis
Background: In recent years, intense research efforts have focused on developing methods for automated flow cytometric data analysis. However, while designing such applications, little or no attention has been paid to the human perspective that is absolutely central to the manual gating process of identifying and characterizing cell populations. In particular, the assumption of many common techniques that cell populations could be modeled reliably with pre-specified distributions may not hold true in real-life samples, which can have populations of arbitrary shapes and considerable inter-sample variation.
<p/>Results: To address this, we developed a new framework flowScape for emulating certain key aspects of the human perspective in analyzing flow data, which we implemented in multiple steps. First, flowScape begins with creating a mathematically rigorous map of the high-dimensional flow data landscape based on dense and sparse regions defined by relative concentrations of events around modes. In the second step, these modal clusters are connected with a global hierarchical structure. This representation allows flowScape to perform ridgeline analysis for both traversing the landscape and isolating cell populations at different levels of resolution. Finally, we extended manual gating with a new capacity for constructing templates that can identify target populations in terms of their relative parameters, as opposed to the more commonly used absolute or physical parameters. This allows flowScape to apply such templates in batch mode for detecting the corresponding populations in a flexible, sample-specific manner. We also demonstrated different applications of our framework to flow data analysis and show its superiority over other analytical methods.
<p/>Conclusions: The human perspective, built on top of intuition and experience, is a very important component of flow cytometric data analysis. By emulating some of its approaches and extending these with automation and rigor, flowScape provides a flexible and robust framework for computational cytomics
Malaria Control Insecticide Residues in Breast Milk: The Need to Consider Infant Health Risks
http://dx.doi.org/10.1289/ehp.090060
Giant pulmonary hamartoma
Pulmonary hamartomas are usually an incidental finding and range in size from 1 cm to 8 cm in diameter in various series. We report a case of a massive pulmonary hamartoma (size 25.5 × 17.5 × 6.5 cm and weighing 1134 g) in a 61 year old male who presented with a short history of breathlessness. The tumour was arising from the medial border of the right lung and occupying most of the right chest extending in to the anterior mediastinum. The tumour was compressing the right lung and there was no evidence of infiltration into the surrounding structures. It was successfully treated by surgical resection and final histology was pulmonary hamartoma with predominantly adipose and leiomyomatous differentiation
Kahler Independence of the G2-MSSM
The G2-MSSM is a model of particle physics coupled to moduli fields with
interesting phenomenology both for colliders and astrophysical experiments. In
this paper we consider a more general model - whose moduli Kahler potential is
a completely arbitrary G2-holonomy Kahler potential and whose matter Kahler
potential is also more general. We prove that the vacuum structure and spectrum
of BSM particles is largely unchanged in this much more general class of
theories. In particular, gaugino masses are still supressed relative to the
gravitino mass and moduli masses. We also consider the effects of higher order
corrections to the matter Kahler potential and find a connection between the
nature of the LSP and flavor effects.Comment: Final version, matches the version published in JHE
Naturally split supersymmetry
Nonobservation of superparticles till date, new Higgs mass limits from the
CMS and ATLAS experiments, WMAP constraints on relic density, various other low
energy data, and the naturalness consideration, all considered simultaneously
imply a paradigm shift of supersymmetric model building. In this paper we
perform, for the first time, a detailed numerical study of brane-world induced
supersymmetry breaking for both minimal and next-to-minimal scenarios. We
observe that a naturally hierarchical spectrum emerges through an interplay of
bulk, brane-localized and quasi-localized fields, which can gain more relevance
in the subsequent phases of the LHC run.Comment: 6 pages, 6 eps figures; v2: minor updates, to appear in JHE
Fucking failures: The future of fat sex
In the context of the obesity ‘epidemic’ fat people’s sex lives are cast as sterile, sexually dysfunctional or just plain non-existent. This article analyzes medical discourses of obesity and sex in order to argue that fat sex is constructed as a type of failure. Using insights from antisocial queer theory, fat sex is further shown to be queer in its failure to adhere to the specifically heteronormative dictates of what Edelman (2004) calls ‘reproductive futurism’. The analysis finally engages with Halberstam’s (2011) notion of queer failure to demonstrate how deconstructing notions of success and failure might offer fat political projects new ways to imagine the future of fat sex
Structural subnetwork evolution across the life-span: rich-club, feeder, seeder
The impact of developmental and aging processes on brain connectivity and the
connectome has been widely studied. Network theoretical measures and certain
topological principles are computed from the entire brain, however there is a
need to separate and understand the underlying subnetworks which contribute
towards these observed holistic connectomic alterations. One organizational
principle is the rich-club - a core subnetwork of brain regions that are
strongly connected, forming a high-cost, high-capacity backbone that is
critical for effective communication in the network. Investigations primarily
focus on its alterations with disease and age. Here, we present a systematic
analysis of not only the rich-club, but also other subnetworks derived from
this backbone - namely feeder and seeder subnetworks. Our analysis is applied
to structural connectomes in a normal cohort from a large, publicly available
lifespan study. We demonstrate changes in rich-club membership with age
alongside a shift in importance from 'peripheral' seeder to feeder subnetworks.
Our results show a refinement within the rich-club structure (increase in
transitivity and betweenness centrality), as well as increased efficiency in
the feeder subnetwork and decreased measures of network integration and
segregation in the seeder subnetwork. These results demonstrate the different
developmental patterns when analyzing the connectome stratified according to
its rich-club and the potential of utilizing this subnetwork analysis to reveal
the evolution of brain architectural alterations across the life-span
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