8 research outputs found

    Appendix A. Photographs showing the appearance of microcosms in the dry-mineral site in June 2000.

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    Photographs showing the appearance of microcosms in the dry-mineral site in June 2000

    Appendix D. A figure showing the comparison of microcosm communities with real communities.

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    A figure showing the comparison of microcosm communities with real communities

    Appendix C. A table showing dominant species and yield from cutting presented by treatments.

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    A table showing dominant species and yield from cutting presented by treatments

    Illumina MiSeq data ITS2 Vascular plants

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    Contains 12 fastq files corresponding to R1 and R2 data from 6 Illumina MiSeq 250 bp PE sequencing libraries. 130 soil samples from Denmark were amplified with tagged primers (S2F and ITS4) and build into TruSeq PCR free libraries. Each sample was amplified in triplicates. Fastq files R1A and R1B contain reads from the first replicates, R2A and R2B from the second, etc. Data were produced as part of the Biowide (Biodiversity in width and depth), carryied out in Denmark from 2014-2018) supported by the Villum foundation. The vascular plant data included here was used in the validation of the LULU algorithm for post-clustering curation of OTU tables for reliable biodiversity metrics, as described in the publication. Tagging scheme and other information needed to demultiplex and analyse the data are accessible on the GitHub repository accompanying the publication/r-package
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