Primary and cyclic somatic embryogenesis in cassava (Manihot esculenta Crantz)

Cassava is one of the major food crops in the tropics. Several of the major problems in cassava can probably only be solved by breeding with cellular and molecular techniques, e.g., the introduction of specific genes (virus resistance, protein content, quality aspects and so on). These genes can be directly applied in existing varieties of vegetatively propagated crops like cassava. Genetic modification requires efficient, genotype-independent regeneration methods. Plant regeneration can be accomplished by two different pathways: organogenesis and somatic embryogenesis. In both organogenesis and embryogenesis, the regenerated structures either originate directly from the explant or indirectly from callus induced from the explant. In most species transformed plants are obtained by indirect regeneration, either by organogenesis or somatic embryogenesis. The callus phase is used to select and multiply transformed cells. Because organogenesis for cassava appeared to be not repeatable, somatic embryogenesis was further investigated. Somatic embryogenesis is defined as the process in which a bipolar embryo is formed which has no vascular connection with the parental tissue. It has been described in more than 200 species [Chapter 11. It was shown by others that in cassava (primary) embryos originated directly from young leaves or zygotic embryos. Direct embryogenesis has been used successfully in a some species for plant transformation. In these species primary somatic embryos themselves were an excellent source to start a new cycle of (secondary) embryogenesis. Repeated subculture of somatic embryos allowed the development of continuously proliferating embryogenic cultures (cyclic embryogenesis). The phase of embryo proliferation was used to select and multiply transformed cells. An overview of culture regimes which allows continuous proliferation of somatic embryos is given in Chapter 2.In initial experiments first cycle or primary embryos were formed from young cassava leaf explants derived from greenhouse grown plants. After 10 days of culture nodular or globular embryos were visible. Globular embryos developed into torpedo shaped embryos which germinated after tranfer to the a medium without auxins. Germinated embryos (GE) are defined as structures with a distinct hypocotyl and large green cotyledons. Five of the six tested South American and Indonesian clones formed germinated embryos. The number of germinated embryos produced, was strongly influenced by the genotype and by hardly controlled growing conditions of the donor plants in the greenhouse. The production of the Colombian clone M.Col22 varied between 0 and 22.1 GE per initial leaf explant (GE/IE). The other clones were considerably lower in their response [Chapter 3]. Therefore, M.Col22 was chosen as a model plant.To create uniform growing conditions in vitro grown donor plants were used as source for leaf explants. Using the same culture conditions as applied for greenhouse derived leaf explants, this approach gave less variation in germinated embryos but also a much lower production (< 1 GE/IE). Doubling of the 2,4-D concentration in the embryo induction medium increased the production to a maximum of 3.5 GE/IE. The embryogenic capacity of M.Col 22 could be further increased to 6.6 GE/IE by growing donor plants at reduced irradiance. The highest production (9.9 GE/IE) was obtained by a pretreatment of donor plants with 2,4-D, a few days before the isolation of leaf explants.Another advantage of the 2,4-D pretreatment of donor plants was studied in Nigerian clones. Only 5 out of 11 invitro grown clones formed globular embryos and only in 2 some of the globular embryos developed into germinated embryos. After 2,4-D pretreatment of the donor plants, 10 out of the 11 clones formed globular embryos and in 8 of them germinated embryos were formed [Chapter 6].Only torpedo shaped and germinated embryos initiate a new cycle of embryogenesis after reculture on induction medium. Germinated embryos were the best starting material to initiate cyclic cultures [Chapter 4]. Independent of the genotype, germinated embryos formed new germinated embryos at a high rate and the embryogenicity seemed not to be changed after one year of culture [Chapters 4 and 6]. The production of cyclic germinated embryos for M.Col22 varied between 6.8 and 9.9 GE/IE. The production of germinated embryos in liquid medium was significantly higher than on solid medium. Also fragmentation of the initial germinated embryos, before starting a new cycle of embryogenesis, enhanced the production. With both improvements, the production of M.Co122 increased to about 30 GE/IE [Chapter 5].Culture of torpedo shaped and germinated embryos on BA supplemented medium allowed their development into shoots.-As for the induction of new embryos, germinated embryos were also the best material to be cultured for shoot development [Chapter 4]. The frequency of shoot development appeared to be genotype dependent [Chapters 3 and 6]. In the clone M.Co122 more than 50 percent and in the clone Tjurug only 10 percent of the germinated embryos developed into shoots. All shoots, independent of the genotype, formed roots on growth regulator- free medium [Chapters 3, 4 and 5].Cyclic embryos originated directly from the cotyledons of the somatic embryo by a budding process. The origin appeared to be multicellular. The first embryogenic divisions started with cells in or near the vascular strands. These initial divisions led either directly to a somatic embryo or to meristematic tissue, of which later embryos were formed [Chapter 7].Almost 500 regenerants of up to the seventeenth cycle embryos were evaluated in vitro for somaclonal variation. Only one regenerant had a visible deviation from control plants (variegated leaves) which was assumed to be of genetic origin [Chapter 8]. About 110 regenerants were transferred to the greenhouse and evaluated for more than 1 year. Plants of the regenerants showed fewer virus-like symptoms than control plants. The root tubers of control plants were more uniform than that of regenerated plants. Some plants of the regenerants had irregularly shaped roots which were not observed in control plants. Not all plants of a particular regenerant had a abnormal root tuber phenotype and this is a clear indication that the cause of this variation is most probably epigenetic (physiological) and, therefore, is expected to disappear with prolonged multiplications. Cassava has proven to be amenable for Agrobacterium -mediated transformation and the transformed cells are able to divide. Unfortunately, the majority of them developed into callus cells and only a few into embryogenic competent cells. Culture procedures which increase the recovery of embryogenic competent cells from transformed cells together with an efficient non-destructive selection procedure should allow the development of an efficient, genotype-independent transformation procedure. This is of importance for breeding of this vegetatively propagated crop, cassava

Kartering terrestrische Natura 2000 habitattypen; Botshol 2009

Momenteel worden voor de Nederlandse Natura 2000 gebieden beheerplannen opgesteld. Voor het formuleren van richtlijnen en maatregelen, alsmede om de ontwikkelingen rond de habitattypen en doelsoorten in de toekomst te kunnen evalueren, is het noodzakelijk om de uitgangssituatie ten aanzien van de habitattypen en doelsoorten goed te beschrijven. Ook de terrestrische vegetatie wordt door de grootste eigenaar in het gebied, de Vereniging Natuurmonumenten, met regelmaat beschreven, maar een eerdere analyse leerde dat de hiervoor gebruikte typologie niet eenduidig valt te vertalen naar Natura 2000 habitattypen. Daarom is in juni en juli 2009 een kartering van de terrestrische habitattypen uitgevoerd. De resultaten van deze kartering worden in dit rapport beschreven

Field testing and exploitation of genetically modified cassava with low-amylose or amylose-free starch in Indonesia

The development and testing in the field of genetically modified -so called- orphan crops like cassava in tropical countries is still in its infancy, despite the fact that cassava is not only used for food and feed but is also an important industrial crop. As traditional breeding of cassava is difficult (allodiploid, vegetatively propagated, outbreeding species) it is an ideal crop for improvement through genetic modification. We here report on the results of production and field testing of genetically modified low-amylose transformants of commercial cassava variety Adira4 in Indonesia. Twenty four transformants were produced and selected in the Netherlands based on phenotypic and molecular analyses. Nodal cuttings of these plants were sent to Indonesia where they were grown under biosafety conditions. After two screenhouse tests 15 transformants remained for a field trial. The tuberous root yield of 10 transformants was not significantly different from the control. Starch from transformants in which amylose was very low or absent showed all physical and rheological properties as expected from amylose-free cassava starch. The improved functionality of the starch was shown for an adipate acetate starch which was made into a tomato sauce. This is the first account of a field trial with transgenic cassava which shows that by using genetic modification it is possible to obtain low-amylose cassava plants with commercial potential with good root yield and starch quality

Successful overwintering of arthropods in roadside verges

In densely populated areas, roadside verges often provide the last semi-natural habitats available. Their ecological value is often stressed by bio survey results. Yet insect summer surveys potentially misjudge the value of a biotope (roadside or otherwise) since the occurrences of species may only be seasonal, or even transient. To effectively ascertain the importance of a site for insects, species must be shown to complete their life cycle there or at least be shown to successfully accomplish critical life stages, such as reproduction or overwintering. To confirm overwintering of arthropods in roadsides, sods were cut in late winter in a verge where several years of summer survey data were available. The sods were placed in transparent semi-permeable cages and kept alive during subsequent spring, summer and autumn. All emerging arthropods were caught inside the cages using pitfall and funnel traps and identified to order or family level. Most of the terrestrial arthropod phyla and orders occurring in NW-Europe appeared to be represented. Several groups were further identified to the species level: Carabidae (Coleoptera), Curculionidae (Coleoptera), Araneae, Orthoptera, Apidae (Hymenoptera), Syrphidae (Diptera) and Dephacidae/Cercopidae (Hemiptera). Particularly for the Carabidae, Araneae and Curculionidae, many species recorded in summer were also found to overwinter; species overlap amounted to approximately 67%. Rarefaction of the summer sample or excluding possible summer vagrants, raised this overlap to as much as 88% for the Carabidae. Many of the species successfully overwintering in the roadside verge were generalists, but less common, more stenotopic species were present as well. Not only species hibernating as adults were involved, but also species overwintering in immature stages, indicating reproduction also takes place in the roadside verge. Apparently the roadside occurrence of many arthropod species, including stenotopic and declining ones, is not merely seasonal or incidental, and roadside verges do not necessarily act as a sink only. The ecological importance often attributed to roadside verges should clearly be taken seriously

Development of a highly efficient, repetitive system of organogenesis in soybean (Glycine max (L.) Merr).

A highly efficient, repetitive system of organogenesis was developed in soybean. Seeds of soybean cv. White hilum pretreated with TDZ formed multiple bud tissue(s) (MBT) at the cotyledonary nodes. MBT initiation occurred only if the axillary buds were not removed from the cotyledonary node. The best MBT formation was achieved by pretreating the seeds for 1 week on medium supplemented with 0.1 mg/l TDZ, followed by culture of the cotyledonary node on medium supplemented with 0.5 mg/l BA for 4 weeks. Culture of the MBT on medium supplemented with 0.1 mg/l TDZ resulted in the proliferation of MBT. MBT was maintained in this way for 12 months. Three hundred thirty six shoots were obtained when 1 g of MBT was subcultured on medium supplemented with 0.5 mg/l BA. Plants were rooted on medium without growth regulators. The regenerated plants grew normally in the greenhouse. Unfortunately, they did not set seeds because of the long-day conditions during growth. This system was successfully applied in three other genotype

De staafmier Ponera coarctata in Nederland (Hymenoptera: Formicidae)

De staafmier staat bekend als zeldzaam, maar dat hangt samen met haar verborgen levenswijze. In deze bijdrage word eerst enkele opmerkelijke vindplaatsen van de staafmier uit het stedelijk gebied beschreven. De beschreven vondsten duiden erop dat de staafmier goed kan voorkomen in niet-natuurlijke situaties en mogelijk algemener is in het zuiden van Nederland dan nu wordt aangenomen. Daarnaast wordt informatie gegeven over haar voorkomen en ecologie op basis van collectiemateriaal en de literatuur. Ook wordt beschikbare informatie over de bruidsvluchten van deze soort mier gebundeld. Het uitvliegen van het nest blijkt plaats te vinden in de namiddag in de periode juli tot eind septembe

The effect of hygromycin on regeneration in different Alstroemeria explant types after Agrobacterium-mediated transformation

This is the first successful report of Agrobacterium-mediated transformation in Alstroemeria by infection of FEC (Friable Embryogenic Callus) lines and leaves with axil tissues. Of the transformation methods, particle bombardment and Agrobacterium-mediated transformation have been widely used to transfer foreign DNA into the plant genome. Especially, Agrobacterium tumefaciens efficiently infects most plants. Most monocotyledonous plants, including Alstroemeria, are recalcitrant to A. tumefaciens infection. Therefore, it is essential to develop an efficient, reliable protocol for Agrobacterium-mediated transformation in Alstroemeria. In order to achieve this aim, different hygromycin concentrations in selection medium were tested and compared in FEC explants and leaves with axil tissues using Agrobacterium strain LBA4404 (pTOK233). As a result, 20 mg/l hygromycin was a proper concentration to select for both FEC lines and leaves with axil tissues. Using this concentration, transformed lines were obtained. Moreover, FEC lines showed at least 2.5 times higher rate in the survival rate, and 5 times higher rate in transient GUS gene expression than those of leaves with axil tissues. The protocol, seems to be a promising method for the transformation of the monocot Alstroemeria with genes of interest in the near future

Kansen voor geleedpotigen in bermen : acht jaar onderzoek langs de weg

Geleedpotigen leven onder steeds moeilijker omstandigheden. De gebieden waar ze leven raken steeds verder versnipperd. Om die reden is het belangrijk om de overgebleven soorten beter te beschermen. Zo ontstond er ook hernieuwde belangstelling voor het leven van geleedpotigen in bermen. Bermen blijken een belangrijke ecologische waarde te hebben. Dit vraagt een doordachte aanpak van het maaien van berme

Improved cassava starch by antisense inhibition of granule-bound starch synthase I

Cassava is a poor man's crop which is mainly grown as a subsistence crop in many developing countries. Its commercial use was first as animal feed (also known as tapioca), but has shifted since the late sixties to a source of native starch. The availability of native starches, which on the one hand do not require substantial chemical derivatisation and on the other hand have improved properties, would make cassava also for small farmers a potentially attractive cash crop. Since breeding is difficult in this polyploid, vegetatively propagated, crop a transgenic approach would be ideal to improve certain characteristics. We have created a cassava genotype producing amylose-free starch by genetic modification. The absence of amylose increased the clarity and stability of gels made with the transgenic starch, without requiring treatment with environment-unfriendly chemicals such as epoxides (propylene oxide, ethylene oxide) and acetic anhydride, which are normally used to improve stability. The amylose-free starch showed no changes in particle size distribution, chain length distribution or phosphorous content when compared to amylose-containing starch, but the granule melting temperature was increased by almost 2°C. Furthermore, the amylose-free cassava starch shows enhanced clarity and stability properties. These improved functionalities are desired in technical applications in paper and textile manufacturing, but also in the food industry for the production of sauces, dairy products and noodle