201 research outputs found
A typology of research training in university-industry collaboration: The case of life sciences in Finland
An Index Theorem for Domain Walls in Supersymmetric Gauge Theories
The supersymmetric abelian Higgs model with N scalar fields admits multiple
domain wall solutions. We perform a Callias-type index calculation to determine
the number of zero modes of this soliton. We confirm that the most general
domain wall has 2(N-1) zero modes, which can be interpreted as the positions
and phases of (N-1) constituent domain walls. This implies the existence of
moduli for a D-string interpolating between N D5-branes in IIB string theory.Comment: 9 pages, REVTeX4; v2: reference adde
Comprehensive functional profiling of long non-coding RNAs through a novel pan-cancer integration approach and modular analysis of their protein-coding gene association networks
Background
Long non-coding RNAs (lncRNAs) are emerging as crucial regulators of cellular processes in diseases such as cancer, although the functions of most remain poorly understood. To address this, here we apply a novel strategy to integrate gene expression profiles across 32 cancer types, and cluster human lncRNAs based on their pan-cancer protein-coding gene associations. By doing so, we derive 16 lncRNA modules whose unique properties allow simultaneous inference of function, disease specificity and regulation for over 800 lncRNAs.
Results
Remarkably, modules could be grouped into just four functional themes: transcription regulation, immunological, extracellular, and neurological, with module generation frequently driven by lncRNA tissue specificity. Notably, three modules associated with the extracellular matrix represented potential networks of lncRNAs regulating key events in tumour progression. These included a tumour-specific signature of 33 lncRNAs that may play a role in inducing epithelial-mesenchymal transition through modulation of TGFβ signalling, and two stromal-specific modules comprising 26 lncRNAs linked to a tumour suppressive microenvironment and 12 lncRNAs related to cancer-associated fibroblasts. One member of the 12-lncRNA signature was experimentally supported by siRNA knockdown, which resulted in attenuated differentiation of quiescent fibroblasts to a cancer-associated phenotype.
Conclusions
Overall, the study provides a unique pan-cancer perspective on the lncRNA functional landscape, acting as a global source of novel hypotheses on lncRNA contribution to tumour progression
Correlations of structural, magnetic, and dielectric properties of undoped and doped CaCu3Ti4O12
The present work reports synthesis, as well as a detailed and careful
characterization of structural, magnetic, and dielectric properties of
differently tempered undoped and doped CaCu3Ti4O12 (CCTO) ceramics. For this
purpose, neutron and x-ray powder diffraction, SQUID measurements, and
dielectric spectroscopy have been performed. Mn-, Fe-, and Ni-doped CCTO
ceramics were investigated in great detail to document the influence of
low-level doping with 3d metals on the antiferromagnetic structure and
dielectric properties. In the light of possible magnetoelectric coupling in
these doped ceramics, the dielectric measurements were also carried out in
external magnetic fields up to 7 T, showing a minor but significant dependence
of the dielectric constant on the applied magnetic field. Undoped CCTO is
well-known for its colossal dielectric constant in a broad frequency and
temperature range. With the present extended characterization of doped as well
as undoped CCTO, we want to address the question why doping with only 1% Mn or
0.5% Fe decreases the room-temperature dielectric constant of CCTO by a factor
of ~100 with a concomitant reduction of the conductivity, whereas 0.5% Ni
doping changes the dielectric properties only slightly. In addition,
diffraction experiments and magnetic investigations were undertaken to check
for possible correlations of the magnitude of the colossal dielectric constants
with structural details or with magnetic properties like the magnetic ordering,
the Curie-Weiss temperatures, or the paramagnetic moment. It is revealed, that
while the magnetic ordering temperature and the effective moment of all
investigated CCTO ceramics are rather similar, there is a dramatic influence of
doping and tempering time on the Curie-Weiss constant.Comment: 10 pages, 11 figure
Study protocol for a randomised clinical trial of a decision aid and values clarification method for parents of a fetus or neonate diagnosed with a life-threatening congenital heart defect
Introduction: Parents who receive the diagnosis of a life-threatening, complex heart defect in their fetus or neonate face a difficult choice between pursuing termination (for fetal diagnoses), palliative care or complex surgical interventions. Shared decision making (SDM) is recommended in clinical contexts where there is clinical equipoise. SDM can be facilitated by decision aids. The International Patient Decision Aids Standards collaboration recommends the inclusion of values clarification methods (VCMs), yet little evidence exists concerning the incremental impact of VCMs on patient or surrogate decision making. This protocol describes a randomised clinical trial to evaluate the effect of a decision aid (with and without a VCM) on parental mental health and decision making within a clinical encounter.
Methods and analysis: Parents who have a fetus or neonate diagnosed with one of six complex congenital heart defects at a single tertiary centre will be recruited. Data collection for the prospective observational control group was conducted September 2018 to December 2020 (N=35) and data collection for two intervention groups is ongoing (began October 2020). At least 100 participants will be randomised 1:1 to two intervention groups (decision aid only vs decision aid with VCM). For the intervention groups, data will be collected at four time points: (1) at diagnosis, (2) postreceipt of decision aid, (3) postdecision and (4) 3 months postdecision. Data collection for the control group was the same, except they did not receive a survey at time 2. Linear mixed effects models will assess differences between study arms in distress (primary outcome), grief and decision quality (secondary outcomes) at 3-month post-treatment decision.
Ethics and dissemination: This study was approved by the University of Utah Institutional Review Board. Study findings have and will continue to be presented at national conferences and within scientific research journals.
Trial registration number: NCT04437069 (Pre-results)
Decreased plasma nociceptin/orphanin FQ levels after acute coronary syndromes
Foregoing researches made on the N/OFQ system brought up a possible role for this system in cardiovascular regulation. In this study we examined how N/OFQ levels of the blood plasma changed in acute cardiovascular diseases. Three cardiac patient groups were created: enzyme positive acute coronary syndrome (EPACS, n = 10), enzyme negative ACS (ENACS, n = 7) and ischemic heart disease (IHD, n = 11). We compared the patients to healthy control subjects (n = 31). We found significantly lower N/OFQ levels in the EPACS [6.86 (6.21–7.38) pg/ml], ENACS [6.97 (6.87–7.01) pg/ml and IHD groups [7.58 (7.23–8.20) pg/ml] compared to the control group [8.86 (7.27–9.83) pg/ml]. A significant correlation was detected between N/OFQ and white blood cell count (WBC), platelet count (PLT), creatine kinase (CK), glutamate oxaloacetate transaminase (GOT) and cholesterol levels in the EPACS group.Decreased plasma N/OFQ is closely associated with the presence of acute cardiovascular disease, and the severity of symptoms has a significant negative correlation with the N/OFQ levels. We believe that the rate of N/OFQ depression is in association with the level of ischemic stress and the following inflammatory response. Further investigations are needed to clarify the relevance and elucidate the exact effects of the ischemic stress on the N/OFQ system
The Implications of the 4 C’s of Supply Chain Network Interaction Strategies for Cost Information Visibility and Network Profitability – An Integrative Model
Influential observations in frontier models, a robust non-oriented approach to the water sector
Causation and reason: R. G. Collingwood and causal analysis as the essence of social thinking
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