Is pulsar B0656+14 a very nearby RRAT source?

The recently discovered RRAT sources are characterized by very bright radio bursts which, while being periodically related, occur infrequently. We find bursts with the same characteristics for the known pulsar B0656+14. These bursts represent pulses from the bright end of an extended smooth pulse-energy distribution and are shown to be unlike giant pulses, giant micropulses or the pulses of normal pulsars. The extreme peak-fluxes of the brightest of these pulses indicates that PSR B0656+14, were it not so near, could only have been discovered as an RRAT source. Longer observations of the RRATs may reveal that they, like PSR B0656+14, emit weaker emission in addition to the bursts.Comment: 4 pages, 4 figures, accepted by ApJ

Pathological voice quality assessment using artificial neural networks

Abstract This paper describes a prototype system for the objective assessment of voice quality in patients recovering from various stages of laryngeal cancer. A large database of male subjects steadily phonating the vowel /i/ was used in the study, and the quality of their voices was independently assessed by a speech and language therapist (SALT) according to their seven-point ranking of subjective voice quality. The system extracts salient short-term and long-term time-domain and frequency-domain parameters from impedance (EGG) signals and these are used to train and test an artificial neural network (ANN). Multi-layer perceptron (MLP) ANNs were investigated using various combinations of these parameters, and the best results were obtained using a combination of short-term and long-term parameters, for which an accuracy of 92% was achieved. It is envisaged that this system could be used as an assessment tool, providing a valuable aid to the SALT during clinical evaluation of voice quality

Arecibo Timing and Single Pulse Observations of 18 Pulsars

We present new results of timing and single pulse measurements for 18 radio pulsars discovered in 1993 - 1997 by the Penn State/NRL declination-strip survey conducted with the 305-m Arecibo telescope at 430 MHz. Long-term timing measurements have led to significant improvements of the rotational and the astrometric parameters of these sources, including the millisecond pulsar, PSR J1709+2313, and the pulsar located within the supernova remnant S147, PSR J0538+2817. Single pulse studies of the brightest objects in the sample have revealed an unusual "bursting" pulsar, PSR J1752+2359, two new drifting subpulse pulsars, PSR J1649+2533 and PSR J2155+2813, and another example of a pulsar with profile mode changes, PSR J1746+2540. PSR J1752+2359 is characterized by bursts of emission, which appear once every 3-5 min. and decay exponentially on a ~45 sec timescale. PSR J1649+2533 spends ~30% of the time in a null state with no detectable radio emission.Comment: submitted to Ap

Arecibo timing observations of 17 pulsars along the Galactic plane

We present phase-coherent timing solutions obtained for the first time for 17 pulsars discovered at Arecibo by Hulse & Taylor (1975ab) in a 430-MHz survey of the Galactic plane. This survey remains the most sensitive of the Galactic plane at 430 MHz and has comparable equivalent sensitivity to the 1400-MHz Parkes multibeam survey. Comparing both surveys we find that, as expected, the one at 430 MHz is limited in depth by interstellar dispersion and scattering effects; and that the detection rate of pulsars with high spin-down luminosity ($\dot E>10^{34}$ erg s$^{-1}$) at the low frequency is a factor of 5 smaller than at high frequency. We also present scatter-broadening measurements for two pulsars and pulse nulling and mode-changing properties for two others.Comment: 10 pages, 3 figures, accepted for publication in A

Pulse-to-pulse intensity modulation and drifting subpulses in recycled pulsars

We report the detection of pulse-to-pulse periodic intensity modulations, in observations of recycled pulsars. Even though the detection of individual pulses was generally not possible due to their low flux density and short duration, through the accumulation of statistics over sequences of 10^5--10^6 pulses we were able to determine the presence and properties of the pulse-to-pulse intensity variations of six pulsars. In most cases we found that the modulation included a weak, broadly quasi-periodic component. For two pulsars the sensitivity was high enough to ascertain that the modulation phase apparently varies systematically across the profile, indicating that the modulation appears as drifting subpulses. We detected brighter than average individual pulses in several pulsars, with energies up to 2--7 times higher than the mean, similar to results from normal pulsars. We were sensitive to giant pulses of a rate of occurrence equal to (and in many instances much lower than) that of PSR B1937+21 at 1400 MHz (~30 times lower than at 430 MHz), but none were detected, indicating that the phenomenon is rare in recycled pulsars.Comment: 15 pages, 17 figures, accepted to A&

Effects of Intermittent Emission: Noise Inventory for Scintillating Pulsar B0834+06

We compare signal and noise for observations of the scintillating pulsar B0834+06, using very-long baseline interferometry and a single-dish spectrometer. Comparisons between instruments and with models suggest that amplitude variations of the pulsar strongly affect the amount and distribution of self-noise. We show that noise follows a quadratic polynomial with flux density, in spectral observations. Constant coefficients, indicative of background noise, agree well with expectation; whereas second-order coefficients, indicative of self-noise, are about 3 times values expected for a pulsar with constant on-pulse flux density. We show that variations in flux density during the 10-sec integration account for the discrepancy. In the secondary spectrum, about 97% of spectral power lies within the pulsar's typical scintillation bandwidth and timescale; an extended scintillation arc contains about 3%. For a pulsar with constant on-pulse flux density, noise in the dynamic spectrum will appear as a uniformly-distributed background in the secondary spectrum. We find that this uniform noise background contains 95% of noise in the dynamic spectrum for interferometric observations; but only 35% of noise in the dynamic spectrum for single-dish observations. Receiver and sky dominate noise for our interferometric observations, whereas self-noise dominates for single-dish. We suggest that intermittent emission by the pulsar, on timescales < 300 microseconds, concentrates self-noise near the origin in the secondary spectrum, by correlating noise over the dynamic spectrum. We suggest that intermittency sets fundamental limits on pulsar astrometry or timing. Accounting of noise may provide means for detection of intermittent sources, when effects of propagation are unknown or impractical to invert.Comment: 38 pages, 10 figure

The subpulse modulation properties of pulsars at 92 cm and the frequency dependence of subpulse modulation

A large sample of pulsars has been observed to study their subpulse modulation at an observing wavelength (when achievable) of both 21 and 92 cm using the Westerbork Synthesis Radio Telescope. In this paper we present the 92-cm data and a comparison is made with the already published 21-cm results. We analysed 191 pulsars at 92 cm using fluctuation spectra. The sample of pulsars is as unbiased as possible towards any particular pulsar characteristics. For 15 pulsars drifting subpulses are discovered for the first time and 26 of the new drifters found in the 21-cm data are confirmed. We discovered nulling for 8 sources and 8 pulsars are found to intermittently emit single pulses that have pulse energies similar to giant pulses. It is estimated that at least half of the total population of pulsars have drifting subpulses when observations with a high enough signal-to-noise ratio would be available. It could well be that the drifting subpulse mechanism is an intrinsic property of the emission mechanism itself, although for some pulsars it is difficult or impossible to detect. Drifting subpulses are in general found at both frequencies, although the chance of detecting drifting subpulses is possibly slightly higher at 92 cm. It appears that the youngest pulsars have the most disordered subpulses and the subpulses become more and more organized into drifting subpulses as the pulsar ages. The correlations with the modulation indices are argued to be consistent with the picture in which the radio emission can be divided in a drifting subpulse signal plus a quasi-steady signal which becomes, on average, stronger at high observing frequencies. The measured values of P3 at the two frequencies are highly correlated, but there is no evidence for a correlation with other pulsar parameters.Comment: 30 pages, 10 figures, accepted for publication in A&A, astro-ph version is missing 191 figures due to file size restrictions. Please download the appendix from http://www.astron.nl/~stappers/wiki/doku.php?id=resources:publication

Detection of Giant Pulses from the Pulsar PSR B1112+50

We detected giant pulses from the pulsar PSR B1112+50. A pulse with an intensity that is a factor of 30 or more higher than the intensity of the average pulse is encountered approximately once in 150 observed pulses. The peak .ux density of the strongest pulse is about 180 Jy. This value is a factor of 80 higher than the peak .ux density of the average pulse. The giant pulses are narrower than the average prfile approximately by a factor of 5 and they cluster about the center of the average profile.Comment: 5 pages, 4 figures, to appear in: Pis'ma v Astronomicheskii Zhurnal, 2003, v.29, No.2, p111-115 and will be translated as: Astronomy Letters, v.29, No.2, p.91-9

Comparative genomics of isolates of a pseudomonas aeruginosa epidemic strain associated with chronic lung infections of cystic fibrosis patients

Pseudomonas aeruginosa is the main cause of fatal chronic lung infections among individuals suffering from cystic fibrosis (CF). During the past 15 years, particularly aggressive strains transmitted among CF patients have been identified, initially in Europe and more recently in Canada. The aim of this study was to generate high-quality genome sequences for 7 isolates of the Liverpool epidemic strain (LES) from the United Kingdom and Canada representing different virulence characteristics in order to: (1) associate comparative genomics results with virulence factor variability and (2) identify genomic and/or phenotypic divergence between the two geographical locations. We performed phenotypic characterization of pyoverdine, pyocyanin, motility, biofilm formation, and proteolytic activity. We also assessed the degree of virulence using the Dictyostelium discoideum amoeba model. Comparative genomics analysis revealed at least one large deletion (40-50 kb) in 6 out of the 7 isolates compared to the reference genome of LESB58. These deletions correspond to prophages, which are known to increase the competitiveness of LESB58 in chronic lung infection. We also identified 308 non-synonymous polymorphisms, of which 28 were associated with virulence determinants and 52 with regulatory proteins. At the phenotypic level, isolates showed extensive variability in production of pyocyanin, pyoverdine, proteases and biofilm as well as in swimming motility, while being predominantly avirulent in the amoeba model. Isolates from the two continents were phylogenetically and phenotypically undistinguishable. Most regulatory mutations were isolate-specific and 29% of them were predicted to have high functional impact. Therefore, polymorphism in regulatory genes is likely to be an important basis for phenotypic diversity among LES isolates, which in turn might contribute to this strain's adaptability to varying conditions in the CF lung

The subpulse modulation properties of pulsars at 21 cm

We present the results of a systematic, unbiased search for subpulse modulation of 187 pulsars performed with the Westerbork Synthesis Radio Telescope (WSRT) in the Netherlands at an observing wavelength of 21 cm. Using new observations and archival WSRT data we have expanded the list of pulsars which show the drifting subpulse phenomenon by 42, indicating that at least one in three pulsars exhibits this phenomenon. The real fraction of pulsars which show the drifting phenomenon is likely to be larger than some 55%. The majority of the analysed pulsars show subpulse modulation (170), of which the majority were not previously known to show subpulse modulation and 30 show clear systematic drifting. The large number of new drifters we have found allows us, for the first time, to do meaningful statistics on the drifting phenomenon. We find that the drifting phenomenon is correlated with the pulsar age such that drifting is more likely to occur in older pulsars. Pulsars which drift more coherently seem to be older and have a lower modulation index. There is no significant correlation found between P3 and other pulsar parameters (such as the pulsar age), as has been reported in the past. There is no significant preference of drift direction and the drift direction is not found to be correlated with pulsar parameters. None of the four complexity parameters predicted by different emission models (Jenet & Gil 2003) are shown to be inconsistent with the set of modulation indices of our sample of pulsars. Therefore none of the models can be ruled out based on our observations. We also present results on some interesting new individual sources like a pulsar which shows similar subpulse modulation in both the main- and interpulse and six pulsars with opposite drift senses in different components.Comment: 32 pages, 12 figures, accepted for publication in A&A, astro-ph version is missing 187 figures due to file size restrictions. Please download appendices from http://www.science.uva.nl/~wltvrede/21cm.pd