134 research outputs found
Electro-Mechanical Fredericks Effects in Nematic Gels
The solid nematic equivalent of the Fredericks transition is found to depend
on a critical field rather than a critical voltage as in the classical case.
This arises because director anchoring is principally to the solid rubbery
matrix of the nematic gel rather than to the sample surfaces. Moreover, above
the threshold field, we find a competition between quartic (soft) and
conventional harmonic elasticity which dictates the director response. By
including a small degree of initial director misorientation, the calculated
field variation of optical anisotropy agrees well with the conoscopy
measurements of Chang et al (Phys.Rev.E56, 595, 1997) of the electro-optical
response of nematic gels.Comment: Latex (revtex style), 5 EPS figures, submitted to PRE, corrections to
discussion of fig.3, cosmetic change
A Viscoelastic model of phase separation
We show here a general model of phase separation in isotropic condensed
matter, namely, a viscoelastic model. We propose that the bulk mechanical
relaxation modulus that has so far been ignored in previous theories plays an
important role in viscoelastic phase separation in addition to the shear
relaxation modulus. In polymer solutions, for example, attractive interactions
between polymers under a poor-solvent condition likely cause the transient
gellike behavior, which makes both bulk and shear modes active. Although such
attractive interactions between molecules of the same component exist
universally in the two-phase region of a mixture, the stress arising from
attractive interactions is asymmetrically divided between the components only
in dynamically asymmetric mixtures such as polymer solutions and colloidal
suspensions. Thus, the interaction network between the slower components, which
can store the elastic energy against its deformation through bulk and shear
moduli, is formed. It is the bulk relaxation modulus associated with this
interaction network that is primarily responsible for the appearance of the
sponge structure peculiar to viscoelastic phase separation and the phase
inversion. We demonstrate that a viscoelastic model of phase separation
including this new effect is a general model that can describe all types of
isotropic phase separation including solid and fluid models as its special
cases without any exception, if there is no coupling with additional order
parameter. The physical origin of volume shrinking behavior during viscoelastic
phase separation and the universality of the resulting spongelike structure are
also discussed.Comment: 14 pages, RevTex, To appear in Phys. Rev
Solar axion search with the CAST experiment
The CAST (CERN Axion Solar Telescope) experiment is searching for solar
axions by their conversion into photons inside the magnet pipe of an LHC
dipole. The analysis of the data recorded during the first phase of the
experiment with vacuum in the magnet pipes has resulted in the most restrictive
experimental limit on the coupling constant of axions to photons. In the second
phase, CAST is operating with a buffer gas inside the magnet pipes in order to
extent the sensitivity of the experiment to higher axion masses. We will
present the first results on the data taking as well as the
system upgrades that have been operated in the last year in order to adapt the
experiment for the data taking. Expected sensitivities on the
coupling constant of axions to photons will be given for the recent run just started in March 2008.Comment: Proceedings of the ICHEP 2008 conferenc
Search for low Energy solar Axions with CAST
We have started the development of a detector system, sensitive to single
photons in the eV energy range, to be suitably coupled to one of the CAST
magnet ports. This system should open to CAST a window on possible detection of
low energy Axion Like Particles emitted by the sun. Preliminary tests have
involved a cooled photomultiplier tube coupled to the CAST magnet via a
Galileian telescope and a switched 40 m long optical fiber. This system has
reached the limit background level of the detector alone in ideal conditions,
and two solar tracking runs have been performed with it at CAST. Such a
measurement has never been done before with an axion helioscope. We will
present results from these runs and briefly discuss future detector
developments.Comment: Paper submitted to the proceedings of the "4th Patras Workshop on
Axions, WIMPs and WISPs", DESY, Hamburg Site - Germany, 18-21 June 2008.
Author affiliations are reported on the title page of the paper. In version
2: 1 affiliation change, 3 references adde
Quantitative trait loci conferring grain mineral nutrient concentrations in durum wheat 3 wild emmer wheat RIL population
Mineral nutrient malnutrition, and particularly
deficiency in zinc and iron, afflicts over 3 billion people
worldwide. Wild emmer wheat, Triticum turgidum ssp.
dicoccoides, genepool harbors a rich allelic repertoire for
mineral nutrients in the grain. The genetic and physiological
basis of grain protein, micronutrients (zinc, iron,
copper and manganese) and macronutrients (calcium,
magnesium, potassium, phosphorus and sulfur) concentration
was studied in tetraploid wheat population of 152
recombinant inbred lines (RILs), derived from a cross
between durum wheat (cv. Langdon) and wild emmer
(accession G18-16). Wide genetic variation was found
among the RILs for all grain minerals, with considerable
transgressive effect. A total of 82 QTLs were mapped for
10 minerals with LOD score range of 3.2–16.7. Most QTLs
were in favor of the wild allele (50 QTLs). Fourteen pairs
of QTLs for the same trait were mapped to seemingly
homoeologous positions, reflecting synteny between the A
and B genomes. Significant positive correlation was found
between grain protein concentration (GPC), Zn, Fe and Cu,
which was supported by significant overlap between the
respective QTLs, suggesting common physiological and/or
genetic factors controlling the concentrations of these
mineral nutrients. Few genomic regions (chromosomes 2A,
5A, 6B and 7A) were found to harbor clusters of QTLs for
GPC and other nutrients. These identified QTLs may
facilitate the use of wild alleles for improving grain
nutritional quality of elite wheat cultivars, especially in
terms of protein, Zn and Fe
Physical mapping integrated with syntenic analysis to characterize the gene space of the long arm of wheat chromosome 1A
Background: Bread wheat (Triticum aestivum L.) is one of the most important crops worldwide and its production faces pressing challenges, the solution of which demands genome information. However, the large, highly repetitive hexaploid wheat genome has been considered intractable to standard sequencing approaches. Therefore the International Wheat Genome Sequencing Consortium (IWGSC) proposes to map and sequence the genome on a chromosome-by-chromosome basis.
Methodology/Principal Findings: We have constructed a physical map of the long arm of bread wheat chromosome 1A using chromosome-specific BAC libraries by High Information Content Fingerprinting (HICF). Two alternative methods (FPC and LTC) were used to assemble the fingerprints into a high-resolution physical map of the chromosome arm. A total of 365 molecular markers were added to the map, in addition to 1122 putative unique transcripts that were identified by microarray hybridization. The final map consists of 1180 FPC based or 583 LTC based contigs. Conclusions/Significance: The physical map presented here marks an important step forward in mapping of hexaploid bread wheat. The map is orders of magnitude more detailed than previously available maps of this chromosome, and the assignment of over a thousand putative expressed gene sequences to specific map locations will greatly assist future functional studies. This map will be an essential tool for future sequencing of and positional cloning within chromosome 1A
Unique and conserved MicroRNAs in wheat chromosome 5D revealed by next-generation sequencing
MicroRNAs are a class of short, non-coding, single-stranded RNAs that act as post-transcriptional regulators in gene expression. miRNA analysis of Triticum aestivum chromosome 5D was performed on 454 GS FLX Titanium sequences of flow sorted chromosome 5D with a total of 3,208,630 good quality reads representing 1.34x and 1.61x coverage of the short (5DS) and long (5DL) arms of the chromosome respectively. In silico and structural analyses revealed a total of 55 miRNAs; 48 and 42 miRNAs were found to be present on 5DL and 5DS respectively, of which 35 were common to both chromosome arms, while 13 miRNAs were specific to 5DL and 7 miRNAs were specific to 5DS. In total, 14 of the predicted miRNAs were identified in wheat for the first time. Representation (the copy number of each miRNA) was also found to be higher in 5DL (1,949) compared to 5DS (1,191). Targets were predicted for each miRNA, while expression analysis gave evidence of expression for 6 out of 55 miRNAs. Occurrences of the same miRNAs were also found in Brachypodium distachyon and Oryza sativa genome sequences to identify syntenic miRNA coding sequences. Based on this analysis, two other miRNAs: miR1133 and miR167 were detected in B. distachyon syntenic region of wheat 5DS. Five of the predicted miRNA coding regions (miR6220, miR5070, miR169, miR5085, miR2118) were experimentally verified to be located to the 5D chromosome and three of them : miR2118, miR169 and miR5085, were shown to be 5D specific. Furthermore miR2118 was shown to be
expressed in Chinese Spring adult leaves. miRNA genes identified in this study will expand our understanding of gene regulation in bread wheat
A comparative study on the effects of a pesticide (cypermethrin) and two metals (copper, lead) to serum biochemistry of Nile tilapia, Oreochromis niloticus
The present study was designed to compare the responses in freshwater fish Oreochromis niloticus exposed to a synthetic pyrethroid, cypermethrin (CYP); an essential metal, copper (Cu); and a nonessential metal, lead (Pb). Fish were exposed to 0.05 μg/l CYP, 0.05 mg/l Cu, and 0.05 mg/l Pb for 4 and 21 days, and the alterations in serum enzyme activities, metabolite, and ion levels were determined. Alanine aminotransferase (ALT) and aspartate aminotransferase (AST) activities increased in response to CYP, Cu, and Pb exposures at both exposure periods. While elevations in alkaline phosphatase (ALP) and lactate dehydrogenase (LDH) activities and in cholesterol level were observed in pesticide-exposed fish at 4 and 21 days, they increased in Cu- and Pb-exposed fish at 21 days. Although metal-exposed fish showed increases in cortisol and glucose levels at 4 days followed by a return to control levels at the end of the exposure period, their levels elevated in pesticide-exposed fish at both exposure periods. Total protein levels decreased in Pb- and pesticide-exposed fish at 21 days. Na+ and Cl− levels decreased in pesticide-exposed fish at both exposure periods and in Cu- and Pb-exposed fish at 21 days. The exposures of pesticide and metals caused an elevation in K+ level at the end of the exposure period. The present study showed that observed alterations in all serum biochemical parameters of fish-treated pesticide were higher than those in fish exposed to metals
Early Results of Combined and Staged Coronary Bypass and Carotid Endarterectomy in Advanced Age Patients in Single Centre
Liquid Crystal Polymer Networks: Preparation, Properties, and Applications of Films with Patterned Molecular Alignment
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