Neural mechanisms of response-preparation and inhibition in bilingual and monolingual children: Lateralized Readiness Potentials (LRPs) during a nonverbal Stroop task

Inhibitory control is a core executive function (EF) skill, thought to involve cognitive 'interference suppression' and motor 'response inhibition' sub-processes. A few studies have shown that early bilingualism shapes interference suppression but not response inhibition skills, however current behavioral measures do not fully allow us to disentangle these subcomponents. Lateralized Readiness Potentials (LRPs) are centroparietal event-related potentials (ERPs) that track motor response-preparations between stimulus-presentation and behavioral responses. We examine LRPs elicited during successful inhibitory control on a nonverbal Stroop task, in 6-8 year-old bilingual (n = 44) and monolingual (n = 48) children from comparable socio-economic backgrounds. Relative to monolinguals, bilinguals showed longer and stronger incorrect-response preparations, and a more mature pattern of correct-response preparation (shorter peak-latencies), underlying correct responses on Stroop-interference trials. Neural markers of response-inhibition were comparable between groups and no behavioral differences were found between-groups on the Stroop task. Results suggest group differences in underlying mechanisms of centroparietal motor-response preparation mechanisms in this age group, contrary to what has been shown using behavioral tasks previously. We discuss neural results in the context of speed-accuracy trade-offs. This is the first study to examine neural markers of motor-responses in bilingual children.Published versio

Study of pion production in νμ\nu_{\mu} interactions on 40^{40}Ar in DUNE using GENIE and NuWro event generators

The study of pion production and the effects of final state interactions (FSI) are important for data analysis in all neutrino experiments. For energies at which current neutrino experiments are being operated, a significant contribution to pion production is made by resonance production process. After its production, if a pion is absorbed in the nuclear matter, the event may become indistinguishable from quasi-elastic scattering process and acts as a background. The estimation of this background is very essential for oscillation experiments and requires good theoretical models for both pion production at primary vertex and after FSI. Due to FSI, the number of final state pions is significantly different from the number produced at primary vertex. As the neutrino detectors can observe only the final state particles, the correct information about the particles produced at the primary vertex is overshadowed by FSI. To overcome this difficulty, a good knowledge of FSI is required which may be provided by theoretical models incorporated in Monte Carlo (MC) neutrino event generators. In this work, we will present simulated events for two different MC generators - GENIE and NuWro, for pion production in $\nu_{\mu}$CC interactions on $^{40}$Ar target in DUNE experimental set up. A brief outline of theoretical models used by generators is presented. The results of pion production are presented in the form of tables showing the occupancy of primary and final state pion topologies with 100$\%$ detector resolution and with kinetic energy detector threshold cuts. We observe that NuWro (v-19.02.2) is more transparent (less responsive) to absorption and charge exchange processes as compared to GENIE (v-3.00.06), pions are more likely to be absorbed than created during their intranuclear transport and there is need to improve detector technology to improve the detector threshold for better results.Comment: 14 pages, 6 figures, 10 table

IoT-Based Assistant for Alzheimer's Patient with Reminder System and Tracking Using GPS

In many nations, there is serious worry over the rising incidence of Alzheimer's disease (AD). New approaches are therefore needed for preventing, identifying, and helping people with AD. Alzheimer patients are facing difficulties during day-to-day activities in terms of traveling and receiving accurate information from their surroundings. We have proposed a smart belt that overcomes most of the problems of Alzheimer’s patients. The belt genuinely aids in identifying the challenges encountered in daily life. The smart belt is embedded with Arduino UNO and a global positioning system (GPS) that helps in sensing emergency alerts. The proposed smart belt provides continuous information about the location of Alzheimer’s patients to the concerned caretaker at an interval of five minutes. The pulse heart rate sensor installed on the belt monitors the health of the user. This heart rate sensor is used to detect the heart rate, and when the heart rate increases a buzzer makes an alert sound and sends an immediate message to the caretaker about the increased heart rate and location. It also contains a speaker module that tells the phone number and address of the caretaker and also some important help line emergency numbers. Sensors are used for achieving these functions. It supports them in remembering their family member’s numbers. This smart belt is useful for patients with mild and moderate Alzheimer's diseas

The Deuterium to Hydrogen Ratio in the Water that Formed the Yellowknife Bay Mudstones in Gale Crater

A suite of isotope ratios of light elements in the present martian atmosphere (13C/12C, 15N/14N, 18O/16O, 38Ar/36Ar, and D/H) are all substantially enriched in the heavy element suggesting atmospheric loss to space over the past billions of years with preferential loss of the lighter isotope from each pair. In situ measurements from MSL's Sample Analysis at Mars (SAM) instrument [e.g. 1,2,3] have considerably refined previous measurements from the Viking mass spectrometers [e.g. 4], from remote spectroscopic observations [e.g. 5,6], and from martian meteorite studies [e.g. 7,8]. The persistence of habitable environments such as the ancient Yellowknife Bay lake recently revealed by measurements from the Curiosity rover [9] depends on the surface temperatures and the duration of an atmosphere thicker than that at present. Current and planned measurements from orbit with the Mars Express and MAVEN missions respectively intend to study the processes of atmospheric escape including solar wind interaction, sputtering, thermal escape, and dissociative recombination, and determine or refine the current rate of atmospheric loss caused by these and other mechanisms. The goal of these programs is to understand the physical processes sufficiently well so that robust extrapolations over the past billions of years can be made D/H is measured by both the Tunable Laser Spectrometer (TLS) and the Quadrupole Mass Spectrometer (QMS) of the SAM suite. to predict the atmospheric and surface conditions on early Mars. However, the study of the history of martian atmospheric evolution will be greatly facilitated if we are able to also directly measure the isotopic composition of volatiles captured in rocks that are representative of the ancient atmosphere. To date, D/H is one of the most promising candidates for this study since water is the most abundant volatile thermally released from the Yellowknife Bay phylosilicates discovered by the SAM and CheMin experiments of MSL and it

Evaluation of an Artificial Intelligence-Augmented Digital System for Histologic Classification of Colorectal Polyps

Importance: Colorectal polyps are common, and their histopathologic classification is used in the planning of follow-up surveillance. Substantial variation has been observed in pathologists\u27 classification of colorectal polyps, and improved assessment by pathologists may be associated with reduced subsequent underuse and overuse of colonoscopy. Objective: To compare standard microscopic assessment with an artificial intelligence (AI)-augmented digital system that annotates regions of interest within digitized polyp tissue and predicts polyp type using a deep learning model to assist pathologists in colorectal polyp classification. Design, Setting, and Participants: In this diagnostic study conducted at a tertiary academic medical center and a community hospital in New Hampshire, 100 slides with colorectal polyp samples were read by 15 pathologists using a microscope and an AI-augmented digital system, with a washout period of at least 12 weeks between use of each modality. The study was conducted from February 10 to July 10, 2020. Main Outcomes and Measures: Accuracy and time of evaluation were used to compare pathologists\u27 performance when a microscope was used with their performance when the AI-augmented digital system was used. Outcomes were compared using paired t tests and mixed-effects models. Results: In assessments of 100 slides with colorectal polyp specimens, use of the AI-augmented digital system significantly improved pathologists\u27 classification accuracy compared with microscopic assessment from 73.9% (95% CI, 71.7%-76.2%) to 80.8% (95% CI, 78.8%-82.8%) (P \u3c.001). The overall difference in the evaluation time per slide between the digital system (mean, 21.7 seconds; 95% CI, 20.8-22.7 seconds) and microscopic examination (mean, 13.0 seconds; 95% CI, 12.4-13.5 seconds) was -8.8 seconds (95% CI, -9.8 to -7.7 seconds), but this difference decreased as pathologists became more familiar and experienced with the digital system; the difference between the time of evaluation on the last set of 20 slides for all pathologists when using the microscope and the digital system was 4.8 seconds (95% CI, 3.0-6.5 seconds). Conclusions and Relevance: In this diagnostic study, an AI-augmented digital system significantly improved the accuracy of pathologic interpretation of colorectal polyps compared with microscopic assessment. If applied broadly to clinical practice, this tool may be associated with decreases in subsequent overuse and underuse of colonoscopy and thus with improved patient outcomes and reduced health care costs.

Full genomic characterization of a porcine rotavirus strain detected in an asymptomatic piglet in Accra, Ghana

Abstract: Background: The introduction of rotavirus A vaccination across the developing world has not proved to be as efficacious as first hoped. One cause of vaccine failure may be infection by zoonotic rotaviruses that are very variable antigenically from the vaccine strain. However, there is a lack of genomic information about the circulating rotavirus A strains in farm animals in the developing world that may be a source of infection for humans. We therefore screened farms close to Accra, Ghana for animals sub-clinically infected with rotavirus A and then sequenced the virus found in one of these samples. Results: 6.1% of clinically normal cows and pigs tested were found to be Rotavirus A virus antigen positive in the faeces. A subset of these (33.3%) were also positive for virus RNA. The most consistently positive pig sample was taken forward for metagenomic sequencing. This gave full sequence for all open reading frames except segment 5 (NSP1), which is missing a single base at the 5′ end. The virus infecting this pig had genome constellation G5-P[7]-I5-R1-C1-M1-A8-N1-T7-E1-H1, a known porcine genotype constellation. Conclusions: Farm animals carry rotavirus A infection sub-clinically at low frequency. Although the rotavirus A genotype discovered here has a pig-like genome constellation, a number of the segments most closely resembled those isolated from humans in suspected cases of zoonotic transmission. Therefore, such viruses may be a source of variable gene segments for re-assortment with other viruses to cause vaccine breakdown. It is recommended that further human and pig strains are characterized in West Africa, to better understand this dynamic

Full genomic characterization of a porcine rotavirus strain detected in an asymptomatic piglet in Accra, Ghana

Abstract: Background: The introduction of rotavirus A vaccination across the developing world has not proved to be as efficacious as first hoped. One cause of vaccine failure may be infection by zoonotic rotaviruses that are very variable antigenically from the vaccine strain. However, there is a lack of genomic information about the circulating rotavirus A strains in farm animals in the developing world that may be a source of infection for humans. We therefore screened farms close to Accra, Ghana for animals sub-clinically infected with rotavirus A and then sequenced the virus found in one of these samples. Results: 6.1% of clinically normal cows and pigs tested were found to be Rotavirus A virus antigen positive in the faeces. A subset of these (33.3%) were also positive for virus RNA. The most consistently positive pig sample was taken forward for metagenomic sequencing. This gave full sequence for all open reading frames except segment 5 (NSP1), which is missing a single base at the 5′ end. The virus infecting this pig had genome constellation G5-P[7]-I5-R1-C1-M1-A8-N1-T7-E1-H1, a known porcine genotype constellation. Conclusions: Farm animals carry rotavirus A infection sub-clinically at low frequency. Although the rotavirus A genotype discovered here has a pig-like genome constellation, a number of the segments most closely resembled those isolated from humans in suspected cases of zoonotic transmission. Therefore, such viruses may be a source of variable gene segments for re-assortment with other viruses to cause vaccine breakdown. It is recommended that further human and pig strains are characterized in West Africa, to better understand this dynamic

Performance of MYC, BCL2, and BCL6 break-apart FISH in small biopsies with large B-cell lymphoma: a retrospective Cytopathology Hematopathology Interinstitutional Consortium study

IntroductionFluorescence in situ hybridization (FISH) is an essential ancillary study used to identify clinically aggressive subsets of large B-cell lymphomas that have MYC, BCL2, or BCL6 rearrangements. Small-volume biopsies such as fine needle aspiration biopsy (FNAB) and core needle biopsy (CNB) are increasingly used to diagnose lymphoma and obtain material for ancillary studies such as FISH. However, the performance of FISH in small biopsies has not been thoroughly evaluated or compared to surgical biopsies.MethodsWe describe the results of MYC, BCL2, and BCL6 FISH in a series of 222 biopsy specimens, including FNAB with cell blocks, CNBs, and surgical excisional or incisional biopsies from 208 unique patients aggregated from 6 academic medical centers. A subset of patients had FNAB followed by a surgical biopsy (either CNB or excisional biopsy) obtained from the same or contiguous anatomic site as part of the same clinical workup; FISH results were compared for these paired specimens.ResultsFISH had a low hybridization failure rate of around 1% across all specimen types. FISH identified concurrent MYC and BCL2 rearrangements in 20 of 197 (10%) specimens and concurrent MYC and BCL6 rearrangements in 3 of 182 (1.6%) specimens. The paired FNAB and surgical biopsy specimens did not show any discrepancies for MYC or BCL2 FISH; of the 17 patients with 34 paired cytology and surgical specimens, only 2 of the 49 FISH probes compared (4% of all comparisons) showed any discrepancy and both were at the BCL6 locus. One discrepancy was due to necrosis of the CNB specimen causing a false negative BCL6 FISH result when compared to the FNAB cell block that demonstrated a BCL6 rearrangement.DiscussionFISH showed a similar hybridization failure rate in all biopsy types. Ultimately, MYC, BCL2, or BCL6 FISH showed 96% concordance when compared across paired cytology and surgical specimens, suggesting FNAB with cell block is equivalent to other biopsy alternatives for evaluation of DLBCL or HGBCL FISH testing