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How to Host a Data Competition: Statistical Advice for Design and Analysis of a Data Competition

Data competitions rely on real-time leaderboards to rank competitor entries and stimulate algorithm improvement. While such competitions have become quite popular and prevalent, particularly in supervised learning formats, their implementations by the host are highly variable. Without careful planning, a supervised learning competition is vulnerable to overfitting, where the winning solutions are so closely tuned to the particular set of provided data that they cannot generalize to the underlying problem of interest to the host. This paper outlines some important considerations for strategically designing relevant and informative data sets to maximize the learning outcome from hosting a competition based on our experience. It also describes a post-competition analysis that enables robust and efficient assessment of the strengths and weaknesses of solutions from different competitors, as well as greater understanding of the regions of the input space that are well-solved. The post-competition analysis, which complements the leaderboard, uses exploratory data analysis and generalized linear models (GLMs). The GLMs not only expand the range of results we can explore, they also provide more detailed analysis of individual sub-questions including similarities and differences between algorithms across different types of scenarios, universally easy or hard regions of the input space, and different learning objectives. When coupled with a strategically planned data generation approach, the methods provide richer and more informative summaries to enhance the interpretation of results beyond just the rankings on the leaderboard. The methods are illustrated with a recently completed competition to evaluate algorithms capable of detecting, identifying, and locating radioactive materials in an urban environment.Comment: 36 page

Double-Axis Rotary Shadowing for High-Resolution Scanning Electron Microscopy

Thin continuous metal coatings and a scanning electron microscope-generated spot size in the range of the visualized particles, are necessary prerequisites if one hopes to extract high-resolution topographic information in the scanning electron microscope. Chemical fixation and dehydration in organic solvents at room temperature lead to severe ultrastructural artifacts which can be avoided by cryofixation and freeze-drying of the specimen. 0.9 to 2.7 nm thick homogeneous layers of chromium and germanium can be deposited onto the surface of cryofixed and freeze-dried specimens at high sub-zero temperatures by electron beam evaporation using double-axis rotary shadowing . Theoretical calculations of the layer geometry of a double-axis rotary shadowed hemisphere and practical experiments on periodical test specimens demonstrate the usefulness of this technique. The resolution obtainable in an in-lens field emission scanning electron microscope is close to transmission electron microscope studies and image reconstructions of the same specimens. Double-axis rotary metal shadowed immunolabelled specimens allow the detection of small colloidal gold markers in the backscattered electron-image. High topographic resolution is obtained in the secondary electron-image

Observations of Colloidal Gold Labelled Platelet Microtubules: High Voltage Electron Microscopy and Low Voltage-High Resolution Scanning Electron Microscopy

18 nm colloidal gold-antitubulin and 4 nm colloidal gold-antitubulin were used to label microtubules in adherent, fully spread platelets. Both sizes of marker effectively labelled microtubules in the partially extracted platelets. However only the 4 nm gold penetrated the dense microfilament matrix of the inner filamentous zone so that portions of microtubules within this cytoskeletal zone could be tracked. The gold marker could be visualized well with 1 MeV high voltage transmission EM and with 5 kV or greater secondary imaging or 20 kV backscattered imaging of carbon only coated samples. 1 kV secondary imaging permitted high resolution imaging of the surface of tubules and the microfilaments with their respective associated material. Individual gold-antibody complexes were difficult to identify by shape alone due to the tendency of the antibody coats to blend together when in very close approximation and due to the presence of other molecules or molecular aggregates similar in size to the gold-antibody labels. Microtubules were seen to wind in and out of the inner and outer filamentous zones as they encircled the granulomere. Some tubules were seen to dead end at the peripheral web. Numerous smaller microtubule loops were present principally in the outer filamentous zone and tubules could be followed as they went from the outer filamentous zone through the inner filamentous zone and into the granulomere

Optical imaging of the effect of in-plane fields on cholesteric liquid crystals

Sharon A. Jewell and J. Roy Sambles, Physical Review E, Vol. 78, article 012701 (2008). Copyright © 2008 by the American Physical Society.The effects of in-plane electric fields on the director structure of cholesteric liquid crystals has been imaged in three dimensions using fluorescence confocal polarizing microscopy. The results show that a liquid crystal lying outside the electrode gap can be significantly affected by stray fields occurring above the electrode surface, resulting in a 90° rotation of the cholesteric helix. Distinct differences between the behavior of cholesterics with positive and negative dielectric anisotropies are observed

Helium irradiation effects in polycrystalline Si, silica, and single crystal Si

Transmission electron microscopy (TEM) has been used to investigate the effects of room temperature 6 keV helium ion irradiation of a thin (≈55 nm thick) tri-layer consisting of polycrystalline Si, silica, and single-crystal Si. The ion irradiation was carried out in situ within the TEM under conditions where approximately 24% of the incident ions came to rest in the specimen. This paper reports on the comparative development of irradiation-induced defects (primarily helium bubbles) in the polycrystalline Si and single-crystal Si under ion irradiation and provides direct measurement of a radiation-induced increase in the width of the polycrystalline layer and shrinkage of the silica layer. Analysis using TEM and electron energy-loss spectroscopy has led to the hypothesis that these result from helium-bubble-induced swelling of the silicon and radiation-induced viscoelastic flow processes in the silica under the influence of stresses applied by the swollen Si layers. The silicon and silica layers are sputtered as a result of the helium ion irradiation; however, this is estimated to be a relatively minor effect with swelling and stress-related viscoelastic flow being the dominant mechanisms of dimensional change

The Block Spin Renormalization Group Approach and Two-Dimensional Quantum Gravity

A block spin renormalization group approach is proposed for the dynamical triangulation formulation of two-dimensional quantum gravity. The idea is to update link flips on the block lattice in response to link flips on the original lattice. Just as the connectivity of the original lattice is meant to be a lattice representation of the metric, the block links are determined in such a way that the connectivity of the block lattice represents a block metric. As an illustration, this approach is applied to the Ising model coupled to two-dimensional quantum gravity. The correct critical coupling is reproduced, but the critical exponent is obscured by unusually large finite size effects.Comment: 10 page