46 research outputs found
Layer-by-layer formation of oligoelectrolyte multilayers: a combined experimental and computational study
For the first time, the combination of experimental preparation and results
of fully atomistic simulations of an oligoelectrolyte multilayer (OEM) made of
poly(diallyl dimethyl ammonium chloride)/poly(styrene sulfonate sodium salt)
(PDADMAC/PSS) is presented. The layer-by-layer growth was carried out by
dipping silica substrates in oligoelectrolyte solutions and was modeled by
means of atomistic molecular dynamics simulations with a protocol that mimics
the experimental procedure up to the assembly of four layers. Measurements of
OEM thickness, surface roughness and amount of adsorbed oligoelectrolyte chains
obtained from both approaches are compared. A good agreement between simulated
and experimental results was found, with some deviations due to intrinsic
limitations of both methods. However, the combination of information extracted
from simulations to support the analysis of experimental data can overcome such
restrictions and improve the interpretation of experimental results. On the
other hand, processes dominated by slower kinetics, like the destabilization of
adsorbed layers upon equilibration with the surrounding environment, are out of
reach for the simulation modeling approach, but they can be investigated by
monitoring in situ the oligoelectrolyte adsorption during the assembly process.
This demonstrates how the synergistic use of simulation and experiments
improves the knowledge of OEM properties down to the molecular scale
Heavy Anionic Complex Creates a Unique Water Structure at a Soft Charged Interface
Ion hydration and interfacial water play crucial roles in numerous phenomena
ranging from biological to industrial systems. Although biologically relevant
(and mostly smaller) ions have been studied extensively in this context, very
little experimental data exist about molecular scale behavior of heavy ions and
their complexes at interfaces, especially under technologically significant
conditions. It has recently been shown that PtCl62- complexes adsorb at
positively charged interfaces in a two-step process that cannot fit into
well-known empirical trends, such as Hofmeister series. Here, a combined
vibrational sum frequency generation and molecular dynamics study reveals that
a unique interfacial water structure is connected to this peculiar adsorption
behavior. A novel sub-ensemble analysis of MD simulation results show that
after adsorption, PtCl62- complexes partially retain their first and second
hydration spheres, and it is possible to identify three different types of
water molecules around them based on their orientational structures and
hydrogen bonding strengths. These results have important implications for
relating interfacial water structure and hydration enthalpy to the general
understanding of specific ion effects. This in turn influences interpretation
of heavy metal ion distribution across and reactivity within, liquid
interfaces
Atomistic simulation of PDADMAC/PSS oligoelectrolyte multilayers: overall comparison of tri- and tetra-layer systems
By employing large-scale molecular dynamics simulations of atomistically
resolved oligoelectrolytes in aqueous solutions, we study in detail the first
four layer-by-layer deposition cycles of an oligoelectrolyte multilayer made of
poly(diallyl dimethyl ammonium chloride)/poly(styrene sulfonate sodium salt)
(PDADMAC/PSS). The multilayers are grown on a silica substrate in 0.1M {NaCl}
electrolyte solutions and the swollen structures are then subsequently exposed
to varying added salt concentration. We investigated the microscopic properties
of the films, analyzing in detail the differences between three- and
four-layers systems. Our simulations provide insights on the early stages of
growth of a multilayer, which are particularly challenging for experimental
observations. We found a rather strong entanglement of the oligoelectrolytes,
with a fuzzy layering of the film structure. The main charge compensation
mechanism is for all cases intrinsic, whereas extrinsic compensation is
relatively ehanced for the layer of the last deposition cycle. In addition, we
quantified other fundamental observables of these systems, as the film
thickness, water uptake, and overcharge fractions for each deposition layer
CSD 1878175: Experimental Crystal Structure Determination
Related Article: Shanna L. Estes, Baofu Qiao, Geng Bang Jin|2019|Nat.Commun.|10|59|doi:10.1038/s41467-018-07982-5,An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures
CCDC 1878177: Experimental Crystal Structure Determination
Related Article: Shanna L. Estes, Baofu Qiao, Geng Bang Jin|2019|Nat.Commun.|10|59|doi:10.1038/s41467-018-07982-5,An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures
CCDC 1878176: Experimental Crystal Structure Determination
Related Article: Shanna L. Estes, Baofu Qiao, Geng Bang Jin|2019|Nat.Commun.|10|59|doi:10.1038/s41467-018-07982-5,An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures
Comparative CHARMM and AMOEBA Simulations of Lanthanide Hydration Energetics and Experimental Aqueous-Solution Structures
The accurate understanding
of metal ion hydration in solutions
is a prerequisite for predicting stability, reactivity, and solubility.
Herein, additive CHARMM force field parameters were developed to enable
molecular dynamics simulations of lanthanide (Ln) speciation in water.
Quantitatively similar to the much more resource-intensive polarizable
AMOEBA potential, the CHARMM simulations reproduce the experimental
hydration free energies and correlations in the first shell (Ln-oxygen
distance and hydration number). Comparisons of difference pair-distribution
functions obtained from the two simulation approaches with those from
high-energy X-ray scattering experiments reveal good agreement of
first-coordination sphere correlations for the Lu<sup>3+</sup> ion
(CHARMM only), but further improvement to both approaches is required
to reproduce the broad, non-Gaussian distribution seen from the La<sup>3+</sup> experiment. Second-coordination sphere comparisons demonstrate
the importance of explicitly including an anion in the simulation.
This work describes the usefulness of less resource-intensive additive
potentials in some complex chemical systems such as solution environments
where multiple interactions have similar energetics. In addition,
3-dimensional descriptions of the La<sup>3+</sup> and Lu<sup>3+</sup> coordination geometries are extracted from the CHARMM simulations
and generally discussed in terms of potential improvements to solute-structure
modeling within solution environments