46 research outputs found

    Layer-by-layer formation of oligoelectrolyte multilayers: a combined experimental and computational study

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    For the first time, the combination of experimental preparation and results of fully atomistic simulations of an oligoelectrolyte multilayer (OEM) made of poly(diallyl dimethyl ammonium chloride)/poly(styrene sulfonate sodium salt) (PDADMAC/PSS) is presented. The layer-by-layer growth was carried out by dipping silica substrates in oligoelectrolyte solutions and was modeled by means of atomistic molecular dynamics simulations with a protocol that mimics the experimental procedure up to the assembly of four layers. Measurements of OEM thickness, surface roughness and amount of adsorbed oligoelectrolyte chains obtained from both approaches are compared. A good agreement between simulated and experimental results was found, with some deviations due to intrinsic limitations of both methods. However, the combination of information extracted from simulations to support the analysis of experimental data can overcome such restrictions and improve the interpretation of experimental results. On the other hand, processes dominated by slower kinetics, like the destabilization of adsorbed layers upon equilibration with the surrounding environment, are out of reach for the simulation modeling approach, but they can be investigated by monitoring in situ the oligoelectrolyte adsorption during the assembly process. This demonstrates how the synergistic use of simulation and experiments improves the knowledge of OEM properties down to the molecular scale

    Heavy Anionic Complex Creates a Unique Water Structure at a Soft Charged Interface

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    Ion hydration and interfacial water play crucial roles in numerous phenomena ranging from biological to industrial systems. Although biologically relevant (and mostly smaller) ions have been studied extensively in this context, very little experimental data exist about molecular scale behavior of heavy ions and their complexes at interfaces, especially under technologically significant conditions. It has recently been shown that PtCl62- complexes adsorb at positively charged interfaces in a two-step process that cannot fit into well-known empirical trends, such as Hofmeister series. Here, a combined vibrational sum frequency generation and molecular dynamics study reveals that a unique interfacial water structure is connected to this peculiar adsorption behavior. A novel sub-ensemble analysis of MD simulation results show that after adsorption, PtCl62- complexes partially retain their first and second hydration spheres, and it is possible to identify three different types of water molecules around them based on their orientational structures and hydrogen bonding strengths. These results have important implications for relating interfacial water structure and hydration enthalpy to the general understanding of specific ion effects. This in turn influences interpretation of heavy metal ion distribution across and reactivity within, liquid interfaces

    Atomistic simulation of PDADMAC/PSS oligoelectrolyte multilayers: overall comparison of tri- and tetra-layer systems

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    By employing large-scale molecular dynamics simulations of atomistically resolved oligoelectrolytes in aqueous solutions, we study in detail the first four layer-by-layer deposition cycles of an oligoelectrolyte multilayer made of poly(diallyl dimethyl ammonium chloride)/poly(styrene sulfonate sodium salt) (PDADMAC/PSS). The multilayers are grown on a silica substrate in 0.1M {NaCl} electrolyte solutions and the swollen structures are then subsequently exposed to varying added salt concentration. We investigated the microscopic properties of the films, analyzing in detail the differences between three- and four-layers systems. Our simulations provide insights on the early stages of growth of a multilayer, which are particularly challenging for experimental observations. We found a rather strong entanglement of the oligoelectrolytes, with a fuzzy layering of the film structure. The main charge compensation mechanism is for all cases intrinsic, whereas extrinsic compensation is relatively ehanced for the layer of the last deposition cycle. In addition, we quantified other fundamental observables of these systems, as the film thickness, water uptake, and overcharge fractions for each deposition layer

    CSD 1878175: Experimental Crystal Structure Determination

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    Related Article: Shanna L. Estes, Baofu Qiao, Geng Bang Jin|2019|Nat.Commun.|10|59|doi:10.1038/s41467-018-07982-5,An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures

    CCDC 1878177: Experimental Crystal Structure Determination

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    Related Article: Shanna L. Estes, Baofu Qiao, Geng Bang Jin|2019|Nat.Commun.|10|59|doi:10.1038/s41467-018-07982-5,An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures

    CCDC 1878176: Experimental Crystal Structure Determination

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    Related Article: Shanna L. Estes, Baofu Qiao, Geng Bang Jin|2019|Nat.Commun.|10|59|doi:10.1038/s41467-018-07982-5,An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures

    Protein Surface Printer for Exploring Protein Domains

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    Comparative CHARMM and AMOEBA Simulations of Lanthanide Hydration Energetics and Experimental Aqueous-Solution Structures

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    The accurate understanding of metal ion hydration in solutions is a prerequisite for predicting stability, reactivity, and solubility. Herein, additive CHARMM force field parameters were developed to enable molecular dynamics simulations of lanthanide (Ln) speciation in water. Quantitatively similar to the much more resource-intensive polarizable AMOEBA potential, the CHARMM simulations reproduce the experimental hydration free energies and correlations in the first shell (Ln-oxygen distance and hydration number). Comparisons of difference pair-distribution functions obtained from the two simulation approaches with those from high-energy X-ray scattering experiments reveal good agreement of first-coordination sphere correlations for the Lu<sup>3+</sup> ion (CHARMM only), but further improvement to both approaches is required to reproduce the broad, non-Gaussian distribution seen from the La<sup>3+</sup> experiment. Second-coordination sphere comparisons demonstrate the importance of explicitly including an anion in the simulation. This work describes the usefulness of less resource-intensive additive potentials in some complex chemical systems such as solution environments where multiple interactions have similar energetics. In addition, 3-dimensional descriptions of the La<sup>3+</sup> and Lu<sup>3+</sup> coordination geometries are extracted from the CHARMM simulations and generally discussed in terms of potential improvements to solute-structure modeling within solution environments
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