BNP facilitates NMB-encoded histaminergic itch via NPRC-NMBR crosstalk

Histamine-dependent and -independent itch is conveyed by parallel peripheral neural pathways that express gastrin-releasing peptide (GRP) and neuromedin B (NMB), respectively, to the spinal cord of mice. B-type natriuretic peptide (BNP) has been proposed to transmit both types of itch via its receptor NPRA encoded b

Caspase polymorphisms and prognosis of hepatocellular carcinoma

The aim of our study was to determine the impact of genetic polymorphisms in the caspase (CASP) genes on prognosis of hepatocellular carcinoma (HCC). We genotyped 7 potentially functional polymorphisms in CASP3, CASP7, CASP8, CASP9, CASP10 genes in 362 HCC patients of receiving surgical resection of HCC tumor. The associations of genotype and haplotype with overall survival (OS) and disease free survival (DFS) were analyzed by using the Cox proportional hazards model. We found that the CASP9 rs4645981 C allele was significantly associated with positive effect on DFS (P = 0.011 and 0.016 for CT+CC vs. TT in univariate and multivariate analysis, respectively), CT genotype was associated with a better OS of HCC than the TT genotype both in univariate and multivariate analysis (P = 0.048 and 0.041, respectively). Moreover, the CASP3 rs2705897 GT genotype showed marginally significant association with decreased OS and DFS, compared with the GG genotype. One haplotype TT/TG in CASP3 (constructed by rs12108497 T>C and rs2705897 T>G) was significantly associated with decreased OS and DFS, compared to the common haplotype TT/TT both in univariate analysis (P = 0.021 and 0.026, respectively) and multivariate analysis (P = 0.025 and 0.030, respectively). The haplotype GT/GT in CASP9 (constructed by rs4645978 A>G and rs4645981 C>T) was significantly associated with decreased DFS both in univariate and multivariate analysis (P = 0.012 and 0.010, respectively). In conclusion, the CASP9 rs4645981 polymorphism, CASP3 and CASP9 haplotypes may be useful prognosis markers for HCC patients with surgical resection of tumor

Mapping and functional characterization of structural variation in 1060 pig genomes

BACKGROUND: Structural variations (SVs) have significant impacts on complex phenotypes by rearranging large amounts of DNA sequence.RESULTS: We present a comprehensive SV catalog based on the whole-genome sequence of 1060 pigs (Sus scrofa) representing 101 breeds, covering 9.6% of the pig genome. This catalog includes 42,487 deletions, 37,913 mobile element insertions, 3308 duplications, 1664 inversions, and 45,184 break ends. Estimates of breed ancestry and hybridization using genotyped SVs align well with those from single nucleotide polymorphisms. Geographically stratified deletions are observed, along with known duplications of the KIT gene, responsible for white coat color in European pigs. Additionally, we identify a recent SINE element insertion in MYO5A transcripts of European pigs, potentially influencing alternative splicing patterns and coat color alterations. Furthermore, a Yorkshire-specific copy number gain within ABCG2 is found, impacting chromatin interactions and gene expression across multiple tissues over a stretch of genomic region of ~200 kb. Preliminary investigations into SV's impact on gene expression and traits using the Pig Genotype-Tissue Expression (PigGTEx) data reveal SV associations with regulatory variants and gene-trait pairs. For instance, a 51-bp deletion is linked to the lead eQTL of the lipid metabolism regulating gene FADS3, whose expression in embryo may affect loin muscle area, as revealed by our transcriptome-wide association studies.CONCLUSIONS: This SV catalog serves as a valuable resource for studying diversity, evolutionary history, and functional shaping of the pig genome by processes like domestication, trait-based breeding, and adaptive evolution.</p

A secret of high-rate mass transfer in anammox granular sludge : "lung-like breathing"

The granulation of anaerobic ammonium oxidation (Anammox) biomass can play a key role in developing stable and high-rate working of anammox process. It is important to know the working mechanism of anammox granular sludge (AnGS) for the optimization of reactor performance. In this study, a “lung-like breathing” determinator was invented to investigate the working behavior of AnGS in the bioreactor. The results showed that the AnGS had a regular expansion and contraction phenomenon, which was called “lung-like breathing”. With the biological loading rate (BLR) at 0.114 kg-N/(kg-VSS·d), the expansion and contraction amplitude (ExCA) was 1.29 ± 0.05%, and the expansion and contraction frequency (ExCF) was 39.3 ± 1.6 times/h. The AnGS cultivated in a bioreactor with higher nitrogen removal rate (NRR) was found to have the higher ExCA and ExCF when determinated at the same BLR, and the “lung-like breathing” behavior of one type of AnGS was revealed to bear a significantly (p < 0.05) positive correlation with the specific anammox activity (SAA). The mass transfer flux from “lung-like breathing” was far greater than that from molecular diffusion, which was regarded as a vital mechanism for the AnGS to demonstrate its high activity. These findings provided theoretical basis and technical parameters for the optimization of anammox nitrogen removal process.This research was financially supported by the National Natural Science Foundation of China (51578484) and Research Funds for Central Universities (2017xzzx010-03). Major Scientific and Technological Specialized Project of Zhejiang Province (2015C03013) was also be highly appreciated

A Method for Autonomous Generation of High-Precision Time Scales for Navigation Constellations

The time maintenance accuracy of the navigation constellation determines the user positioning and timing performance. Especially in autonomous operation scenarios, the performance of navigation constellation maintenance time directly affects the duration of constellation autonomous navigation. Among them, the frequency stability of the atomic clock onboard the navigation satellite is a key factor. In order to further improve the stability of the navigation constellation time-frequency system, combined with the development of high-precision inter-satellite link measurement technology, the idea of constructing constellation-level synthetic atomic time has gradually become the development trend of major GNSS systems. This paper gives a navigation constellation time scale generation framework, and designs an improved Kalman plus weights (KPW) time scale algorithm and time-frequency steer algorithm that integrates genetic algorithms. Finally, a 30-day autonomous timekeeping simulation was carried out using the GPS precision clock data provided by CODE, when the sampling interval is 300 s, the Allan deviation of the output time scale is 5.73 × 10−14, a 71% improvement compared with the traditional KPW time scale algorithm; when the sampling interval is 1 day, the Allan deviation is 9.17 × 10−15; when the sampling interval is 1 × 106 s, the Allan deviation is 8.87 × 10−16, a 94% improvement compared with the traditional KPW time scale algorithm. The constellation-level high-precision time scale generation technology proposed in this paper can significantly improve the stability performance of navigation constellation autonomous timekeeping

CT‐determined low skeletal muscle mass predicts worse overall survival of gastric cancer in patients with cachexia

Abstract Background There were controversies for the association between computed tomography (CT)‐determined low skeletal muscle mass (SMM) and overall survival (OS) in gastric cancer (GC). In this study, we investigated whether cachexia could be a potential confounding variable for this issue. Methods We retrospectively collected the patients of GC in our institution between July 2016 and January 2021. Preoperative SMM was determined by analyzing the skeletal muscle index of L3 with abdominal CT, and the cut‐offs for low SMM were defined as <52.4 (men) and < 38.5 cm2/m2 (women), respectively. Overall survival (OS) was the primary endpoint. Results Of the 255 included GC patients, 117 (46%) were classified as having low SMM. Those with low SMM were associated with a higher level of circulating interleukin 6 and C reactive protein but a lower level of albumin than those of normal SMM. The univariate analysis showed that low SMM, tumor‐node‐metastasis (TNM) stage, body mass index (BMI), postoperative chemotherapy, and cachexia were significantly associated with OS, while in the multivariate analysis, only low SMM and TNM stage were significantly associated with OS. Kaplan–Meier survival curves with log‐rank tests indicated that low SMM significantly predicted worse OS of GC. After grouping by cachexia, the low SMM significantly predicted worse OS in patients with cachexia instead of those without cachexia. Conclusions CT‐determined low SMM predicts worse OS of GC in patients with cachexia instead of those without cachexia, and greater attention should be paid to such patients with synchronous low SMM and cachexia

Image_1_Prognostic value of cachexia index in patients with colorectal cancer: A retrospective study.tiff

BackgroundCurrent diagnostic criteria for cancer cachexia are inconsistent, and arguments still exist about the impact of cachexia on the survival of patients with colorectal cancer. In this study, we aim to investigate the prognostic value of a novel cachexia indicator, the cachexia index (CXI), in patients with colorectal cancer.MethodsThe CXI was calculated as skeletal muscle index (SMI) × serum albumin/neutrophil-lymphocyte ratio. The cut-off value of CXI was determined by the receiver operating characteristic (ROC) curves and Youden’s index. The major outcomes were major complications, overall survival (OS), and recurrence-free survival (RFS).ResultsA total of 379 patients (234 men and 145 women) were included. The ROC curves indicated that CXI had a significantly diagnostic capacity for the detection of major complications. Based on Youden’s index, there were 231 and 148 patients in the low and high CXI groups, respectively. Patients in the low CXI group had significantly older age, lower BMI, and a higher percentage of cachexia and TNM stage II+III. Besides, Patients in low CXI group were associated with a significantly higher rate of major complications, blood transfusion, and longer length of stay. Logistic regression analysis indicated that low CXI, cachexia, and coronary heart disease were independent risk factors for the major complications. Kaplan Meier survival curves indicated that patients with high CXI had a significantly more favorable OS than those with low CXI, while no significant difference was found in RFS between the two groups. Besides, there were no significant differences in OS or RFS between patients with and without cachexia. The univariate and multivariate Cox regression analysis indicated that older age, low CXI, and coronary heart disease instead of cachexia were associated with a decreased OS.ConclusionCXI was better than cachexia in predicting OS and could be a useful prognostic indicator in patients with colorectal cancer, and greater attention should be paid to patients with low CXI.</p