912 research outputs found

    The Diet of the Cumberland Plateau Salamander (Plethodon kentucki) in an old growth forest of southeastern Kentucky

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    Examining the diet of salamanders is important for understanding their effects on invertebrate communities and the interactions among sympatric salamander species. We examined the diet of the Cumberland Plateau Salamander, Plethodon kentucki (Mittleman), in an old growth forest in southeastern Kentucky. A total of 763 prey items were recovered from 73 salamanders with an average of 10.75 prey items per stomach. The four most important prey groups were Formicidae (ants), Araneae (spiders), Coleoptera (beetles), and Collembola (springtails). Overall, we found a total of 58 different prey types in the stomach contents from 20 invertebrate orders. This study represents one of the few successful uses of nonlethal gastric lavage methods on a large plethodontid salamander and the first description of P. kentucki diet identified to family and genus. Future work should examine diet throughout the year, compare prey species composition to sympatric salamander species, and look at local prey abundances and diversity to explore salamander foraging behavior

    The Diet of the Cumberland Plateau Salamander (Plethodon kentucki) in an old growth forest of southeastern Kentucky

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    Terrestrial lungless salamanders are known to reach very high densities in forested ecosystems of the United States. They can be important for the top down regulation of invertebrates Diets of 57% (31 of 54) Plethodonsalamanders are still poorly known The Cumberland Plateau Salamander (Plethodon kentucki) is a large plethodontid common in the Central Appalachians, however, its diet is only known from West Virginia DOI: 10.13140/RG.2.2.18118.4768

    Diet Composition: A Proximate Mechanism Explaining Stream Salamander Declines in Surface Waters with Elevated Specific Conductivity

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    Changes in land use, such as mountaintop removal mining with valley fills (MTR-VF), often results in headwater streams with elevated specific conductivity (SC). Stream salamanders appear to be particularly sensitive to elevated SC, as previous studies have shown occupancy and abundance decline consistently among all species and life stages as SC increases. Yet, the proximate mechanism responsible for the population declines in streams with elevated SC have eluded researchers. We sampled salamander assemblages across a continuous SC gradient (30–1966 μS/cm) in southeastern Kentucky and examined the diet of larval and adult salamanders to determine if the ratio of aquatic to terrestrial prey (autochthony), total prey volume, aquatic prey importance (Ix), and body condition are influenced by SC. Further, we asked if threshold points for each diet component were present along a gradient of SC. Larval salamanders experienced a 12–fold decline in autochthony at 153 μS/cm, a 4.2–fold decline in total prey volume at 100 μS/cm, a 2.2-fold decline in aquatic Ix at 135 μS/cm, and a rapid decline in body condition as SC increased. Adult salamanders experienced a 3–fold decline in autochthony at 382 μS/cm, no change in prey volumes, a 2-fold decline in aquatic Ix at 163 μS/cm, and a decline in body condition as SC increased. Our results indicate that SC indirectly affects stream salamander populations by changing the composition of diet, which suggests that food availability is a proximate mechanism that leads to reduced population occupancy, abundance, and persistence in streams with elevated SC

    Occupancy and Abundance of Stream Salamanders along a Specific Conductance Gradient

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    In the Central Appalachians (USA), mountaintop-removal mining accompanied by valley fills often leads to streams with elevated specific conductivity (SC). Thus, the ionic composition of freshwaters in this region is hypothesized to be a driver of the distribution and abundance of freshwater taxa, including stream salamanders. We examined the association between SC and stream salamander populations by conducting salamander counts in 30 southeastern Kentucky streams across a continuous gradient of SC that ranged from 30 to 1966 μS/cm. We counted 2319 salamanders across 5 species and, using a hierarchical Bayesian version of the N-mixture model, found a negative association between SC and salamander occupancy rates. This finding was consistent across adults and larvae of the 5 species we examined. Furthermore, we found that most salamander species and life stages showed reduced abundances given occupancy at greater SC levels. For example, estimated mean abundance given occupancy of larval Southern Two-lined Salamanders (Eurycea cirrigera) was 67.69 (95% credible interval 48.31–98.25) ind/10 m at 250 μS/cm and 2.30 (95% credible interval 1.46–3.93) ind/10 m at 2000 μS/cm. The consistent negative association across all species and life stages supports the hypothesis that salamander distributions and abundances are negatively associated with elevated SC of streams in southeastern Kentucky, even though physical and chemical environmental attributes, such as forest cover within stream catchments, were correlated with SC. Restoration of streams affected by mountaintop-removal mining should focus on restoring the ionic compositions that naturally occur in this region

    The Radio Sky at Meter Wavelengths: m-Mode Analysis Imaging with the Owens Valley Long Wavelength Array

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    A host of new low-frequency radio telescopes seek to measure the 21-cm transition of neutral hydrogen from the early universe. These telescopes have the potential to directly probe star and galaxy formation at redshifts 20z720 \gtrsim z \gtrsim 7, but are limited by the dynamic range they can achieve against foreground sources of low-frequency radio emission. Consequently, there is a growing demand for modern, high-fidelity maps of the sky at frequencies below 200 MHz for use in foreground modeling and removal. We describe a new widefield imaging technique for drift-scanning interferometers, Tikhonov-regularized mm-mode analysis imaging. This technique constructs images of the entire sky in a single synthesis imaging step with exact treatment of widefield effects. We describe how the CLEAN algorithm can be adapted to deconvolve maps generated by mm-mode analysis imaging. We demonstrate Tikhonov-regularized mm-mode analysis imaging using the Owens Valley Long Wavelength Array (OVRO-LWA) by generating 8 new maps of the sky north of δ=30\delta=-30^\circ with 15 arcmin angular resolution, at frequencies evenly spaced between 36.528 MHz and 73.152 MHz, and \sim800 mJy/beam thermal noise. These maps are a 10-fold improvement in angular resolution over existing full-sky maps at comparable frequencies, which have angular resolutions 2\ge 2^\circ. Each map is constructed exclusively from interferometric observations and does not represent the globally averaged sky brightness. Future improvements will incorporate total power radiometry, improved thermal noise, and improved angular resolution -- due to the planned expansion of the OVRO-LWA to 2.6 km baselines. These maps serve as a first step on the path to the use of more sophisticated foreground filters in 21-cm cosmology incorporating the measured angular and frequency structure of all foreground contaminants.Comment: 27 pages, 18 figure

    Leucine Rich α-2 Glycoprotein: A Novel Neutrophil Granule Protein and Modulator of Myelopoiesis

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    Leucine-rich α2 glycoprotein (LRG1), a serum protein produced by hepatocytes, has been implicated in angiogenesis and tumor promotion. Our laboratory previously reported the expression of LRG1 in murine myeloid cell lines undergoing neutrophilic granulocyte differentiation. However, the presence of LRG1 in primary human neutrophils and a role for LRG1 in regulation of hematopoiesis have not been previously described. Here we show that LRG1 is packaged into the granule compartment of human neutrophils and secreted upon neutrophil activation to modulate the microenvironment. Using immunofluorescence microscopy and direct biochemical measurements, we demonstrate that LRG1 is present in the peroxidase-negative granules of human neutrophils. Exocytosis assays indicate that LRG1 is differentially glycosylated in neutrophils, and co-released with the secondary granule protein lactoferrin. Like LRG1 purified from human serum, LRG1 secreted from activated neutrophils also binds cytochrome c. We also show that LRG1 antagonizes the inhibitory effects of TGFβ1 on colony growth of human CD34+ cells and myeloid progenitors. Collectively, these data invoke an additional role for neutrophils in innate immunity that has not previously been reported, and suggest a novel mechanism whereby neutrophils may modulate the microenvironment via extracellular release of LRG1

    SIV-specific CD8+ T cells are clonotypically distinct across lymphoid and mucosal tissues

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    CD8+ T cell responses are necessary for immune control of simian immunodeficiency virus (SIV). However, the key parameters that dictate antiviral potency remain elusive, conceivably because most studies to date have been restricted to analyses of circulating CD8+ T cells. We conducted a detailed clonotypic, functional, and phenotypic survey of SIV-specific CD8+ T cells across multiple anatomical sites in chronically infected rhesus macaques with high (>10,000 copies/mL plasma) or low burdens of viral RNA (<10,000 copies/mL plasma). No significant differences in response magnitude were identified across anatomical compartments. Rhesus macaques with low viral loads (VLs) harbored higher frequencies of polyfunctional CXCR5+ SIV-specific CD8+ T cells in various lymphoid tissues and higher proportions of unique Gag-specific CD8+ T cell clonotypes in the mesenteric lymph nodes relative to rhesus macaques with high VLs. In addition, public Gag-specific CD8+ T cell clonotypes were more commonly shared across distinct anatomical sites than the corresponding private clonotypes, which tended to form tissue-specific repertoires, especially in the peripheral blood and the gastrointestinal tract. Collectively, these data suggest that functionality and tissue localization are important determinants of CD8+ T cell–mediated efficacy against SIV

    Investigation of the genetic association between quantitative measures of psychosis and schizophrenia:A polygenic risk score analysis

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    The presence of subclinical levels of psychosis in the general population may imply that schizophrenia is the extreme expression of more or less continuously distributed traits in the population. In a previous study, we identified five quantitative measures of schizophrenia (positive, negative, disorganisation, mania, and depression scores). The aim of this study is to examine the association between a direct measure of genetic risk of schizophrenia and the five quantitative measures of psychosis. Estimates of the log of the odds ratios of case/control allelic association tests were obtained from the Psychiatric GWAS Consortium (PGC) (minus our sample) which included genome-wide genotype data of 8,690 schizophrenia cases and 11,831 controls. These data were used to calculate genetic risk scores in 314 schizophrenia cases and 148 controls from the Netherlands for whom genotype data and quantitative symptom scores were available. The genetic risk score of schizophrenia was significantly associated with case-control status (p<0.0001). In the case-control sample, the five psychosis dimensions were found to be significantly associated with genetic risk scores; the correlations ranged between.15 and.27 (all p<.001). However, these correlations were not significant in schizophrenia cases or controls separately. While this study confirms the presence of a genetic risk for schizophrenia as categorical diagnostic trait, we did not find evidence for the genetic risk underlying quantitative schizophrenia symptom dimensions. This does not necessarily imply that a genetic basis is nonexistent, but does suggest that it is distinct from the polygenic risk score for schizophrenia
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