29 research outputs found

    Low incidence of SARS-CoV-2, risk factors of mortality and the course of illness in the French national cohort of dialysis patients

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    Les Machines a Vapeur marines et les Propulseurs a l'Exposition Universelle de 1867 : rapports adressés à son Excellence M. le Ministre de la Marine

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    Par MM. Bonnefoy, Hubac, Joublin, Morel, Mouche, et PostecIndirektes handschriftliches Exlibris: "1908, 102", das ist: Herrn Prof. Tobler, ZĂŒrich Exemplar der ETH-BI

    Marinitoga aeolica sp. nov., a novel thermophilic anaerobic heterotroph isolated from a shallow hydrothermal field of Panarea Island in the Aeolian archipelago, Italy

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    A novel thermophilic strain, designated BP5-C20A T , was isolated from the shallow hydrothermal field of the Panarea island in the Aeolian archipelago close to Sicily, Italy. Cells are motile rods surrounded with a ‘toga’, Gram-stain-negative and display a straight to curved morphology during the exponential phase. Strain BP5-C20A T is thermophilic (optimum 55 °C), moderately acidophilic (optimum pH 5.6) and halotolerant (optimum 25 g l −1 NaCl). It can use yeast extract, peptone and tryptone. It uses the following carbohydrates: cellobiose, fructose, glucose, maltose, starch, sucrose and xylan. Elemental sulphur is used as an electron acceptor and reduced to hydrogen sulphide. The predominant cellular fatty acid is C 16 : 0 . Phylogenetic analysis showed that strain BP5-C20A T shared 97.3 % 16S rRNA gene sequence identity with the closest related species Marinitoga lauensis LG1 T . The complete genome of strain BP5-C20A T is 2.44 Mb in size with a G+C content of 27.3 mol%. The dDDH and ANI values between the genomes of strains BP5-C20A T and M. lauensis LG1 T are 31.0 and 85.70% respectively. Finally, from its physiological, metabolic and genomic characteristics, strain BP5-C20A T (=DSM 112332 T =JCM 39183 T ) is proposed as representative of a novel species of the genus Marinitoga named Marinitoga aeolica sp. nov. and belonging to the order Petrotogales , in the phylum Thermotogota

    Le champ hydrothermal hyperalcalin de la baie du Prony

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    Metagenomic and PCR-Based Diversity Surveys of [FeFe]-Hydrogenases Combined with Isolation of Alkaliphilic Hydrogen-Producing Bacteria from the Serpentinite-Hosted Prony Hydrothermal Field, New Caledonia

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    High amounts of hydrogen are emitted in the serpentinite-hosted hydrothermal field of the Prony Bay (PHF, New Caledonia), where high-pH (similar to 11), low-temperature (< 40 degrees C), and low-salinity fluids are discharged in both intertidal and shallow submarine environments. In this study, we investigated the diversity and distribution of potentially hydrogen-producing bacteria in Prony hyperalkaline springs by using metagenomic analyses and different PCR-amplified DNA sequencing methods. The retrieved sequences of hydA genes, encoding the catalytic subunit of [FeFe]-hydrogenases and, used as a molecular marker of hydrogen-producing bacteria, were mainly related to those of Firmicutes and clustered into two distinct groups depending on sampling locations. Intertidal samples were dominated by new hydA sequences related to uncultured Firmicutes retrieved from paddy soils, while submarine samples were dominated by diverse hydA sequences affiliated with anaerobic and/or thermophilic submarine Firmicutes pertaining to the orders Therrnoanaerobacterales or Clostridiales. The novelty and diversity of these [FeFe]-hydrogenases may reflect the unique environmental conditions prevailing in the PHF (i.e., high-pH, low-salt, mesothermic fluids). In addition, novel alkaliphilic hydrogen-producing Firmicutes (Clostridiales and Bacillales) were successfully isolated from both intertidal and submarine PHF chimney samples. Both molecular and cultivation-based data demonstrated the ability of Firmicutes originating from serpentinite-hosted environments to produce hydrogen by fermentation, potentially contributing to the molecular hydrogen balance in situ

    Metagenomic and PCR-based diversity surveys of &#91;FeFe&#93;-hydrogenases combined with isolation of alkaliphilic hydrogen-producing bacteria from the serpentinite-hosted Prony hydrothermal field, New Caledonia

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    High amounts of hydrogen are emitted in the serpentinite-hosted hydrothermal field of the Prony Bay (PHF, New Caledonia), where high-pH (similar to 11), low-temperature (< 40 degrees C), and low-salinity fluids are discharged in both intertidal and shallow submarine environments. In this study, we investigated the diversity and distribution of potentially hydrogen-producing bacteria in Prony hyperalkaline springs by using metagenomic analyses and different PCR-amplified DNA sequencing methods. The retrieved sequences of hydA genes, encoding the catalytic subunit of &#91;FeFe&#93;-hydrogenases and, used as a molecular marker of hydrogen-producing bacteria, were mainly related to those of Firmicutes and clustered into two distinct groups depending on sampling locations. Intertidal samples were dominated by new hydA sequences related to uncultured Firmicutes retrieved from paddy soils, while submarine samples were dominated by diverse hydA sequences affiliated with anaerobic and/or thermophilic submarine Firmicutes pertaining to the orders Therrnoanaerobacterales or Clostridiales. The novelty and diversity of these &#91;FeFe&#93;-hydrogenases may reflect the unique environmental conditions prevailing in the PHF (i.e., high-pH, low-salt, mesothermic fluids). In addition, novel alkaliphilic hydrogen-producing Firmicutes (Clostridiales and Bacillales) were successfully isolated from both intertidal and submarine PHF chimney samples. Both molecular and cultivation-based data demonstrated the ability of Firmicutes originating from serpentinite-hosted environments to produce hydrogen by fermentation, potentially contributing to the molecular hydrogen balance in situ

    Characterization of Microaerobacter geothermalis gen. nov., sp nov., a novel microaerophilic, nitrate- and nitrite-reducing thermophilic bacterium isolated from a terrestrial hot spring in Tunisia

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    A novel thermophilic anaerobic and microaerophilic bacterium (optimal growth in the presence of 5-10% O-2), strain Nad S1(T) was isolated from the terrestrial hot spring of Hammam Sidi Jdidi, Nabeul, Tunisia. Cells were motile rods having a Gram-positive cell wall structure. Strain Nad S1(T) grew optimally at 55A degrees C (range 37-70A degrees C). Optimum pH for growth was 6.5-7.0. It was halotolerant growing with NaCl up to 7% (optimum concentration 1.5-3.0%). It grew chemoorganotrophically on various carbohydrates, organic-acids and amino-acids as energy sources, or chemolithotrophically on H-2 using nitrate, as terminal electron acceptor. Beside oxygen (under microaerobic conditions) and nitrate, nitrite was also used. Nitrate was completely reduced to N-2. No fermentation occurred. The genomic DNA G + C content was 41.8 mol%. Based on 16S rRNA gene sequence analysis, strain Nad S1(T) belongs to the Bacillaceae family within the class 'Bacilli'. Because of its phylogenetic and phenotypic characteristics, we propose this isolate to be assigned as a novel genus and a novel species within the domain Bacteria, Microaerobacter geothermalis gen. nov., sp. nov. The type strain is Nad S1(T) (=DSM 22679(T) =JCM 16213(T))

    Fluid chemistry of the low temperature hyperalkaline hydrothermal system of Prony Bay (New Caledonia)

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    The terrestrial hyperalkaline springs of Prony Bay (southern lagoon, New Caledonia) have been known since the nineteenth century, but a recent high-resolution bathymetric survey of the seafloor has revealed the existence of numerous submarine structures similar to the well-known Aiguille de Prony, which are also the location of high-pH fluid discharge into the lagoon. During the HYDROPRONY cruise (28 October to 13 November 2011), samples of waters, gases and concretions were collected by scuba divers at underwater vents. Four of these sampling sites are located in Prony Bay at depths up to 50 m. One (Bain des Japonais spring) is also in Prony Bay but uncovered at low tide and another (RiviĂšre des Kaoris spring) is on land slightly above the seawater level at high tide. We report the chemical composition (Na, K, Ca, Mg, Cl, SO4, dissolved inorganic carbon, SiO2(aq)) of 45 water samples collected at six sites of high-pH water discharge, as well as the composition of gases. Temperatures reach 37 °C at the Bain des Japonais and 32 °C at the spring of the Kaoris. Gas bubbling was observed only at these two springs. The emitted gases contain between 12 and 30% of hydrogen in volume of dry gas, 6 to 14% of methane, and 56 to 72% of nitrogen, with trace amounts of carbon dioxide, ethane and propane. pH values and salinities of all the 45 collected water samples range from the seawater values (8.2 and 35 g L−1) to hyperalkaline freshwaters of the Ca-OH type (pH 11 and salinities as low as 0.3 g L−1) showing that the collected samples are always a mixture of a hyperalkaline fluid of meteoric origin and ambient seawater. Cl-normalized concentrations of dissolved major elements first show that the Bain des Japonais is distinct from the other sites. Water collected at this site are three component mixtures involving the high-pH fluid, the lagoon seawater and the river water from the nearby RiviĂšre du CarĂ©nage. The chemical compositions of the hyperalkaline endmembers (at pH 11) are not significantly different from one site to the other although the sites are several kilometres away from each other and are located on different ultramafic substrata. The very low salinity of the hyperalkaline endmembers shows that seawater does not percolate through the ultramafic formation. Mixing of the hyperalkaline hydrothermal endmember with local seawater produces large ranges and very sharp gradients of pH, salinity and dissolved element concentrations. There is a major change in the composition of the water samples at a pH around 10, which delimitates the marine environment from the hyperalkaline environment. The redox potential evolves toward negative values at high pH indicative of the reducing conditions due to bubbling of the H2-rich gas. The calculation of the mineral saturation states carried out for the Na-K-Ca-Mg-Cl-SO4-DIC-SiO2-H2O system shows that this change is due to the onset of brucite formation. While the saturation state of the Ca carbonates over the whole pH range is typical of that found in a normal marine environment, Mg- and Mg-Ca carbonates (magnesite, hydromagnesite, huntite, dolomite) exhibit very large supersaturations with maximum values at a pH of around 10, very well marked for the Bain des Japonais, emphasizing the role of water mixing in mineral formation.The discharge of high-pH waters of meteoric origin into the lagoon marine environment makes the hydrothermal system of Prony Bay unique compared to other low temperature serpentinizing environments such as Oman (fully continental) or Lost City (fully marine)
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