学会抄録

Genome annotation. (XLSX 9 kb

Consensus_types_with_4_align

consensus of each mito type alignment with addition of "type 4

top_50_midrr

Mid point re-routed bayesian phylogeny of top 50 most common amplicons with 2 million iteration

Consensus_types_align

Consensus of each mito type alignmen

Barcode_and_type

tab separated table of location and relative type percentage with barcodes

nGr.v1.0.iprscan.xml

interproscan as ts

nGr.v1.0.annotation+TE

GFF file with locations of all gene calls in the G. rostochiensis genome and all transposable element predictions

nGr.v1.0.iprscan.xml

inter pro scan as gzipped xm

Additional file 19: Figure S9. of The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence

Synteny clusters. Network representation of i-ADHoRe results. Scaffolds are represented as nodes (blue = G. rostochiensis, ochre = G. pallida) whose diameter is scaled by scaffold length and vertices are drawn between them if five or more anchorpoints (i.e. syntenic proteins, numbers on vertices indicate count of anchorpoints) have been found. The biggest cluster (dashed black line) is composed of 26 G. rostochiensis scaffolds (4.99 Mb) and 35 G. pallida scaffolds (5.54 Mb). Part of this cluster (grey dotted line) is shown in Fig. 6. (PDF 570 kb

nGr.v1.0.blast2go

blast2go annotation as gff3 fil