36 research outputs found

    Appendix D. Canonical Correspondence Analysis (CCA) scores.

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    Canonical Correspondence Analysis (CCA) scores

    Appendix E. Regression coefficients for square-root transformed species richness within several guilds of Amazonian understory birds.

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    Regression coefficients for square-root transformed species richness within several guilds of Amazonian understory birds

    Appendix B. Species occurrences and environmental variables.

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    Species occurrences and environmental variables

    Appendix A. Guild assignments and species of note or confusion.

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    Guild assignments and species of note or confusion

    Appendix F. Regression of species richness on primary forest cover, at eight test sites.

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    Regression of species richness on primary forest cover, at eight test sites

    Supplementary Information

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    Number of occurrences for each species and species sampling; Fossil calibration; AUC and CI for niche models; Relative input of variables into niche models; Test for normality of PC variances; Kurtosis for PC scores distributions; Geographical range for each species; Mean latitude and centroid-based latitude estimates for each species; Evolutionary models comparison for niche position and breadt

    Source code for the JIVE model

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    Set of R scripts to run the JIVE model described in the Kostikova et al manuscript

    Pseudouroctonus reddelli and P. sprousei, COI data

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    Nexus file with aligned COI sequences. See ReadMe file to match sample names with species and voucher specimens

    Pseudouroctonus reddelli and P. sprousei, 16S data

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    Nexus file with aligned 16S sequences. See ReadMe file to match sample names with species and voucher specimens
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