68 research outputs found
Resolving species boundaries in the <i>Atlanta brunnea</i> species group (Gastropoda, Pterotracheoidea)
Assessing species boundaries in the open sea: an integrative taxonomic approach to the pteropod genus <i>Diacavolinia</i>
Diversity and distribution of hyperiid amphipods along a latitudinal transect in the Atlantic Ocean
The use of hand-sanitiser gel facilitates combined morphological and genetic analysis of shelled pteropods
There is a lack of standardised imaging methods for marine zooplankton due to the difficulty of manipulating small and often fragile specimens. Yet, standardised 2D photographs and 3D scans provide important morphological information to accompany DNA-barcoded specimens for reference databases such as the Barcode of Life Data System (BOLD). Shelled pteropods are considered as bio-indicators to study impacts of ocean acidification, and thus, it is especially important to obtain high-quality records of their fragile aragonitic shells. We used alcohol-based hand sanitiser gel as a medium for photographing pteropods of the genus Limacina prior to micro-CT scanning and destructive DNA analysis. The high viscosity and transparency of the hand sanitiser enabled easy handling of the specimens so that they could be positioned in a standardised orientation and photographed with a stacking microscope. The high-quality photographs provide a record of morphology and allow for subsequent geometric morphometric analyses. This method did not impact the downstream micro-CT and molecular analyses of the same specimens and resulted in publicly available 2D and 3D digital vouchers as well as ten reference DNA barcodes (partial Cytochrome Oxidase I gene sequences). While alcohol-based hand sanitiser entered our daily lives due to a distressing pandemic, we could make use of it as a cheap and easily available resource to make high quality voucher photographs of shelled pteropods. Digital vouchers serve as a record of their morphology for further taxonomic analyses and facilitate studies assessing shell growth and impacts of ocean acidification
Phylogeography of the Sponge Suberites diversicolor in Indonesia: Insights into the Evolution of Marine Lake Populations
The existence of multiple independently derived populations in landlocked marine lakes provides an opportunity for fundamental research into the role of isolation in population divergence and speciation in marine taxa. Marine lakes are landlocked water bodies that maintain a marine character through narrow submarine connections to the sea and could be regarded as the marine equivalents of terrestrial islands. The sponge Suberites diversicolor (Porifera: Demospongiae: Suberitidae) is typical of marine lake habitats in the Indo-Australian Archipelago. Four molecular markers (two mitochondrial and two nuclear) were employed to study genetic structure of populations within and between marine lakes in Indonesia and three coastal locations in Indonesia, Singapore and Australia. Within populations of S. diversicolor two strongly divergent lineages (A & B) (COI: p = 0.4% and ITS: p = 7.3%) were found, that may constitute cryptic species. Lineage A only occurred in Kakaban lake (East Kalimantan), while lineage B was present in all sampled populations. Within lineage B, we found low levels of genetic diversity in lakes, though there was spatial genetic population structuring. The Australian population is genetically differentiated from the Indonesian populations. Within Indonesia we did not record an East-West barrier, which has frequently been reported for other marine invertebrates. Kakaban lake is the largest and most isolated marine lake in Indonesia and contains the highest genetic diversity with genetic variants not observed elsewhere. Kakaban lake may be an area where multiple putative refugia populations have come into secondary contact, resulting in high levels of genetic diversity and a high number of endemic specie
Diversity and abundance of pteropods and heteropods along a latitudinal gradient across the Atlantic Ocean
- …