10 research outputs found
An <i>S</i> = <sup>1</sup>/<sub>2</sub> Iron Complex Featuring N<sub>2</sub>, Thiolate, and Hydride Ligands: Reductive Elimination of H<sub>2</sub> and Relevant Thermochemical Fe–H Parameters
Believed to accumulate on the Fe
sites of the FeMo-cofactor (FeMoco)
of MoFe-nitrogenase under turnover, strongly donating hydrides have
been proposed to facilitate N<sub>2</sub> binding to Fe and may also
participate in the hydrogen evolution process concomitant to nitrogen
fixation. Here, we report the synthesis and characterization of a
thiolate-coordinated Fe<sup>III</sup>(H)Â(N<sub>2</sub>) complex, which
releases H<sub>2</sub> upon warming to yield an Fe<sup>II</sup>–N<sub>2</sub>–Fe<sup>II</sup> complex. Bimolecular reductive elimination
of H<sub>2</sub> from metal hydrides is pertinent to the hydrogen
evolution processes of both enzymes and electrocatalysts, but well-defined
examples are uncommon and usually observed from diamagnetic second-
and third-row transition metals. Kinetic data obtained on the HER
of this ferric hydride species are consistent with a bimolecular reductive
elimination pathway, arising from cleavage of the Fe–H bond
with a computationally determined BDFE of 55.6 kcal/mol
An <i>S</i> = <sup>1</sup>/<sub>2</sub> Iron Complex Featuring N<sub>2</sub>, Thiolate, and Hydride Ligands: Reductive Elimination of H<sub>2</sub> and Relevant Thermochemical Fe–H Parameters
Believed to accumulate on the Fe
sites of the FeMo-cofactor (FeMoco)
of MoFe-nitrogenase under turnover, strongly donating hydrides have
been proposed to facilitate N<sub>2</sub> binding to Fe and may also
participate in the hydrogen evolution process concomitant to nitrogen
fixation. Here, we report the synthesis and characterization of a
thiolate-coordinated Fe<sup>III</sup>(H)Â(N<sub>2</sub>) complex, which
releases H<sub>2</sub> upon warming to yield an Fe<sup>II</sup>–N<sub>2</sub>–Fe<sup>II</sup> complex. Bimolecular reductive elimination
of H<sub>2</sub> from metal hydrides is pertinent to the hydrogen
evolution processes of both enzymes and electrocatalysts, but well-defined
examples are uncommon and usually observed from diamagnetic second-
and third-row transition metals. Kinetic data obtained on the HER
of this ferric hydride species are consistent with a bimolecular reductive
elimination pathway, arising from cleavage of the Fe–H bond
with a computationally determined BDFE of 55.6 kcal/mol
An <i>S</i> = <sup>1</sup>/<sub>2</sub> Iron Complex Featuring N<sub>2</sub>, Thiolate, and Hydride Ligands: Reductive Elimination of H<sub>2</sub> and Relevant Thermochemical Fe–H Parameters
Believed to accumulate on the Fe
sites of the FeMo-cofactor (FeMoco)
of MoFe-nitrogenase under turnover, strongly donating hydrides have
been proposed to facilitate N<sub>2</sub> binding to Fe and may also
participate in the hydrogen evolution process concomitant to nitrogen
fixation. Here, we report the synthesis and characterization of a
thiolate-coordinated Fe<sup>III</sup>(H)Â(N<sub>2</sub>) complex, which
releases H<sub>2</sub> upon warming to yield an Fe<sup>II</sup>–N<sub>2</sub>–Fe<sup>II</sup> complex. Bimolecular reductive elimination
of H<sub>2</sub> from metal hydrides is pertinent to the hydrogen
evolution processes of both enzymes and electrocatalysts, but well-defined
examples are uncommon and usually observed from diamagnetic second-
and third-row transition metals. Kinetic data obtained on the HER
of this ferric hydride species are consistent with a bimolecular reductive
elimination pathway, arising from cleavage of the Fe–H bond
with a computationally determined BDFE of 55.6 kcal/mol
Ammonia Binds to the Dangler Manganese of the Photosystem II Oxygen-Evolving Complex
High-resolution
X-ray structures of photosystem II reveal several potential substrate
binding sites at the water-oxidizing/oxygen-evolving 4MnCa cluster.
Aspartate-61 of the D1 protein hydrogen bonds with one such water
(W1), which is bound to the dangler Mn4A of the oxygen-evolving complex.
Comparison of pulse EPR spectra of <sup>14</sup>NH<sub>3</sub> and <sup>15</sup>NH<sub>3</sub> bound to wild-type Synechocystis PSII and a D1-D61A mutant lacking this hydrogen-bonding interaction
demonstrates that ammonia binds as a terminal NH<sub>3</sub> at this
dangler Mn4A site and not as a partially deprotonated bridge between
two metal centers. The implications of this finding on identifying
the binding sites of the substrate and the subsequent mechanism of
dioxygen formation are discussed
Highly Activated Terminal Carbon Monoxide Ligand in an Iron–Sulfur Cluster Model of FeMco with Intermediate Local Spin State at Fe
Nitrogenases, the enzymes that convert N2 to
NH3, also catalyze the reductive coupling of CO to yield
hydrocarbons.
CO-coordinated species of nitrogenase clusters have been isolated
and used to infer mechanistic information. However, synthetic FeS
clusters displaying CO ligands remain rare, which limits benchmarking.
Starting from a synthetic cluster that models a cubane portion of
the FeMo cofactor (FeMoco), including a bridging carbyne ligand, we
report a heterometallic tungsten–iron–sulfur cluster
with a single terminal CO coordination in two oxidation states with
a high level of CO activation (νCO = 1851 and 1751
cm–1). The local Fe coordination environment (2S,
1C, 1CO) is identical to that in the protein making this system a
suitable benchmark. Computational studies find an unusual intermediate
spin electronic configuration at the Fe sites promoted by the presence
the carbyne ligand. This electronic feature is partly responsible
for the high degree of CO activation in the reduced cluster
Structural Effects of Ammonia Binding to the Mn<sub>4</sub>CaO<sub>5</sub> Cluster of Photosystem II
The
Mn<sub>4</sub>CaO<sub>5</sub> oxygen-evolving complex (OEC)
of photosystem II catalyzes the light-driven oxidation of two substrate
waters to molecular oxygen. ELDOR-detected NMR along with computational
studies indicated that ammonia, a substrate analogue, binds as a terminal
ligand to the Mn4A ion <i>trans</i> to the O5 μ<sub>4</sub> oxido bridge. Results from electron spin echo envelope modulation
(ESEEM) spectroscopy confirmed this and showed that ammonia hydrogen
bonds to the carboxylate side chain of D1-Asp61. Here we further probe
the environment of OEC with an emphasis on the proximity of exchangeable
protons, comparing ammonia-bound and unbound forms. Our ESEEM and
electron nuclear double resonance (ENDOR) results indicate that ammonia
substitutes for the W1 terminal water ligand without significantly
altering the electronic structure of the OEC
Pulse Electron Paramagnetic Resonance Studies of the Interaction of Methanol with the S<sub>2</sub> State of the Mn<sub>4</sub>O<sub>5</sub>Ca Cluster of Photosystem II
The binding of the substrate analogue
methanol to the catalytic
Mn<sub>4</sub>CaO<sub>5</sub> cluster of the water-oxidizing enzyme
photosystem II is known to alter the electronic structure properties
of the oxygen-evolving complex without retarding O<sub>2</sub>-evolution
under steady-state illumination conditions. We report the binding
mode of <sup>13</sup>C-labeled methanol determined using 9.4 GHz (X-band)
hyperfine sublevel-correlation (HYSCORE) and 34 GHz (Q-band) electron
spin–echo electron nuclear double resonance (ESE-ENDOR) spectroscopies.
These results are compared to analogous experiments on a mixed-valence
MnÂ(III)ÂMnÂ(IV) complex (2-OH-3,5-Cl<sub>2</sub>-salpn)<sub>2</sub>ÂMnÂ(III)ÂMnÂ(IV)
(salpn = <i>N</i>,<i>N</i>′-bisÂ(3,5-dichlorosalicylidene)-1,3-diamino-2-hydroxypropane)
in which methanol ligates to the MnÂ(III) ion (Larson et al. (1992) J. Am. Chem.
Soc., 114, 6263). In the mixed-valence MnÂ(III,IV) complex, the hyperfine coupling
to the <sup>13</sup>C of the bound methanol (<i>A</i><sub>iso</sub> = 0.65 MHz, <i>T</i> = 1.25 MHz) is appreciably
larger than that observed for <sup>13</sup>C methanol associated with
the Mn<sub>4</sub>CaO<sub>5</sub> cluster poised in the S<sub>2</sub> state, where only a weak dipolar hyperfine interaction (<i>A</i><sub>iso</sub> = 0.05 MHz, <i>T</i> = 0.27 MHz)
is observed. An evaluation of the <sup>13</sup>C hyperfine interaction
using the X-ray structure coordinates of the Mn<sub>4</sub>CaO<sub>5</sub> cluster indicates that methanol does not bind as a terminal
ligand to any of the manganese ions in the oxygen-evolving complex.
We favor methanol binding in place of a water ligand to the Ca<sup>2+</sup> in the Mn<sub>4</sub>CaO<sub>5</sub> cluster or in place
of one of the waters that form hydrogen bonds with the oxygen bridges
of the cluster
Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: <i>E. coli</i> Ribonucleotide Reductase As an Example
Fluorinated tyrosines
(F<sub><i>n</i></sub>Y’s, <i>n</i> = 2
and 3) have been site-specifically incorporated into <i>E. coli</i> class Ia ribonucleotide reductase (RNR) using the
recently evolved <i>M. jannaschii</i> Y-tRNA synthetase/tRNA
pair. Class Ia RNRs require four redox active Y’s, a stable
Y radical (Y·) in the β subunit (position 122 in <i>E. coli</i>), and three transiently oxidized Y’s (356
in β and 731 and 730 in α) to initiate the radical-dependent
nucleotide reduction process. F<sub><i>n</i></sub>Y (3,5;
2,3; 2,3,5; and 2,3,6) incorporation in place of Y<sub>122</sub>-β
and the X-ray structures of each resulting β with a diferric
cluster are reported and compared with wt-β2 crystallized under
the same conditions. The essential diferric-F<sub><i>n</i></sub>Y· cofactor is self-assembled from apo F<sub><i>n</i></sub>Y-β2, Fe<sup>2+</sup>, and O<sub>2</sub> to produce ∼1
Y·/β2 and ∼3 Fe<sup>3+</sup>/β2. The F<sub><i>n</i></sub>Y· are stable and active in nucleotide
reduction with activities that vary from 5% to 85% that of wt-β2.
Each F<sub><i>n</i></sub>Y·-β2 has been characterized
by 9 and 130 GHz electron paramagnetic resonance and high-field electron
nuclear double resonance spectroscopies. The hyperfine interactions
associated with the <sup>19</sup>F nucleus provide unique signatures
of each F<sub><i>n</i></sub>Y· that are readily distinguishable
from unlabeled Y·’s. The variability of the abiotic F<sub><i>n</i></sub>Y p<i>K</i><sub>a</sub>’s
(6.4 to 7.8) and reduction potentials (−30 to +130 mV relative
to Y at pH 7.5) provide probes of enzymatic reactions proposed to
involve Y·’s in catalysis and to investigate the importance
and identity of hopping Y·’s within redox active proteins
proposed to protect them from uncoupled radical chemistry
Manganese–Cobalt Oxido Cubanes Relevant to Manganese-Doped Water Oxidation Catalysts
Incorporation
of Mn into an established water oxidation catalyst
based on a CoÂ(III)<sub>4</sub>O<sub>4</sub> cubane was achieved by
a simple and efficient assembly of permanganate, cobaltÂ(II) acetate,
and pyridine to form the cubane oxo cluster MnCo<sub>3</sub>O<sub>4</sub>(OAc)<sub>5</sub>py<sub>3</sub> (OAc = acetate, py = pyridine)
(<b>1-OAc</b>) in good yield. This allows characterization of
electronic and chemical properties for a manganese center in a cobalt
oxide environment, and provides a molecular model for Mn-doped cobalt
oxides. The electronic properties of the cubane are readily tuned
by exchange of the OAc<sup>–</sup> ligand for Cl<sup>–</sup> (<b>1-Cl</b>), NO<sub>3</sub><sup>–</sup> (<b>1-NO</b><sub><b>3</b></sub>), and pyridine (<b>[1-py]</b><sup>+</sup>). EPR spectroscopy, SQUID magnetometry, and DFT calculations
thoroughly characterized the valence assignment of the cubane as [Mn<sup>IV</sup>Co<sup>III</sup><sub>3</sub>]. These cubanes are redox-active,
and calculations reveal that the Co ions behave as the reservoir for
electrons, but their redox potentials are tuned by the choice of ligand
at Mn. This MnCo<sub>3</sub>O<sub>4</sub> cubane system represents
a new class of easily prepared, versatile, and redox-active oxido
clusters that should contribute to an understanding of mixed-metal,
Mn-containing oxides