Adaptive Evolution of piRNA pathway in Drosophila

Major fraction of eukaryotic genomes is composed of transposons. Mobilization of these transposons leads to mutations and genomic instability. In animals, these selfish genetic elements are regulated by a class of small RNAs called PIWI interacting RNAs (piRNAs). Thus host piRNA pathway acts as a defense against pathogenic transposons. Many piRNA pathway genes are rapidly evolving indicating that they are involved in a host-pathogen arms race. In my thesis, I investigated the nature of this arms race by checking functional consequences of the sequence diversity in piRNA pathway genes. In order to study the functional consequences of the divergence in piRNA pathway genes, we swapped piRNA pathway genes between two sibling Drosophila species, Drosophila melanogaster and Drosophila simulans. We focused on RDC complex, composed of Rhino, Deadlock and Cutoff, which specifies piRNA clusters and regulates transcription from clusters. None of the D. simulans RDC complex proteins function in D. melanogaster. Rhino and Deadlock interact and colocalize in D. simulans and D. melanogaster, but D. simulans Rhino does not bind D. melanogaster Deadlock, due to substitutions in the rapidly evolving Shadow domain. Cutoff from D. simulans stably binds and traps D. melanogaster Deadlock. Adaptive evolution has thus generated cross-species incompatibilities in the piRNA pathway which may contribute in reproductive isolation

Rapid evolution and conserved function of the piRNA pathway

Transposons are major genome constituents that can mobilize and trigger mutations, DNA breaks and chromosome rearrangements. Transposon silencing is particularly important in the germline, which is dedicated to transmission of the inherited genome. Piwi-interacting RNAs (piRNAs) guide a host defence system that transcriptionally and post-transcriptionally silences transposons during germline development. While germline control of transposons by the piRNA pathway is conserved, many piRNA pathway genes are evolving rapidly under positive selection, and the piRNA biogenesis machinery shows remarkable phylogenetic diversity. Conservation of core function combined with rapid gene evolution is characteristic of a host-pathogen arms race, suggesting that transposons and the piRNA pathway are engaged in an evolutionary tug of war that is driving divergence of the biogenesis machinery. Recent studies suggest that this process may produce biochemical incompatibilities that contribute to reproductive isolation and species divergence

A Survey on Fruit Quality Inspection Using K-Means Segmentation

In recent era, the Agricultural production (ex. Fruits) has increased rapidly .So it become very dif?cult to detect the Quality of Fruit. This leads towards a need of scalable solution. As to satisfy today's requirement, we are proposing a system which gives better result for detection of Fruits quality efficiently. Serialized Database is used to store the image features. The different database is a used to store different types of images according to system requirement .It is also able to analysethe another disease related to detected disease. This approach provides solution for defect segmentation of fruit. Proposed approach will improves defect segmentation quality related to precision and computational time

Effect of Austenitization Temperature on Wear Behavior of Carbidic Austempered Ductile Iron (CADI)

Chromium bearing Austempered Ductile Iron (ADI) has been recently in the news for its improved wear performance over the ADI. The work presented below was taken up to study the effect of different austenitisation temperatures on the microstructure and wear performance of the Carbidic Austempered Ductile Iron (CADI). In this investigation Cr bearing ductile iron was subjected to austempering treatment to obtain an ausferritic microstructure. Two different austenitisation temperatures were selected whereas, the austempering temperature and time was kept unchanged. Microstructure and wear performance of this alloy, austenitized at two different temperatures was studied

Effect of Austenitization Temperature on Wear Behavior of Carbidic Austempered Ductile Iron (CADI)

Chromium bearing Austempered Ductile Iron (ADI) has been recently in the news for its improved wear performance over the ADI. The work presented below was taken up to study the effect of different austenitisation temperatures on the microstructure and wear performance of the Carbidic Austempered Ductile Iron (CADI). In this investigation Cr bearing ductile iron was subjected to austempering treatment to obtain an ausferritic microstructure. Two different austenitisation temperatures were selected whereas, the austempering temperature and time was kept unchanged. Microstructure and wear performance of this alloy, austenitized at two different temperatures was studied

Adaptive Evolution Targets a piRNA Precursor Transcription Network

In Drosophila, transposon-silencing piRNAs are derived from heterochromatic clusters and a subset of euchromatic transposon insertions, which are bound by the Rhino-Deadlock-Cutoff complex. The HP1 homolog Rhino binds to Deadlock, which recruits TRF2 to promote non-canonical transcription from both genomic strands. Cuff function is less well understood, but this Rai1 homolog shows hallmarks of adaptive evolution, which can remodel functional interactions within host defense systems. Supporting this hypothesis, Drosophila simulans Cutoff is a dominant-negative allele when expressed in Drosophila melanogaster, in which it traps Deadlock, TRF2, and the conserved transcriptional co-repressor CtBP in stable complexes. Cutoff functions with Rhino and Deadlock to drive non-canonical transcription. In contrast, CtBP suppresses canonical transcription of transposons and promoters flanking the major germline clusters, and canonical transcription interferes with downstream non-canonical transcription and piRNA production. Adaptive evolution thus targets interactions among Cutoff, TRF2, and CtBP that balance canonical and non-canonical piRNA precursor transcription

Orthodontic Camouflage in Skeletal Class III Malocclusion: A Contemporary Review

Early orthopedic intervention can be effective in normalizing skeletal class III malocclusions if patients are treated in a timely manner. There are a large number of skeletal class III patients that either decline or cannot afford surgical treatment. The only alternative is ‘Orthodontic camouflage’ through comprehensive treatment with fixed appliances. The ultimate judgment as to whether orthodontic treatment alone, to camouflage a skeletal problem, would be an acceptable result, or whether orthognathic surgery to correct the jaw discrepancy would be required, must be made by the patient and parents. Class III camouflage logically would be the reverse of class II camouflage, based on retracting the lower incisors, advancing the upper incisors, and surgically reducing the prominence of the chin, in addition, rotating the mandible downward and backward, when the chin is prominent, can be considered a form of camouflage. Even though timing of orthodontic treatment has always been somewhat controversial, it is an agreement in the literature that prognosis is still obscure until growth is completed. A cephalometric analysis is needed to quantitatively record the severity of the class III malocclusion and to determine the underlying cause of the deformity. Although it is agreed that camouflage line of treatment is not an ideal lineof treatment, but it serves its purpose very well in mild rangeof skeletal dysplasia’s and in conditions where patient is eitherunwilling for orthognathic surgery or in cases were surgery iscontraindicated

Adaptive evolution targets a piRNA precursor transcription network [preprint]

In Drosophila, transposon-silencing piRNAs are derived from heterochromatic clusters and a subset of euchromatic transposon insertions, which are transcribed from internal non-canonical initiation sites and flanking canonical promoters. Rhino binds to Deadlock, which recruits TRF2 to promote non-canonical transcription of these loci. Cuff co-localizes with Rhino and Del. The role of Cuff is less well understood, but the cuff gene shows hallmarks of adaptive evolution, which frequently targets functional interactions within host defense systems. We show that Drosophila simulans cuff is a dominant negative allele when expressed in Drosophila melanogaster, where it traps Deadlock, TRF2 and the transcriptional co-repressor CtBP in stable nuclear complexes. Cuff promotes Rhino and Deadlock localization, driving non-canonical transcription. CtBP, by contrast, suppresses canonical cluster and transposon transcription, which interferes with downstream non-canonical transcription and piRNA production. Cuff, TRF2 and CtBP thus form a network that balances canonical and non-canonical piRNA precursor transcription

OPTIMIZATION OF ISOTHERMAL TRANSFORMATION PERIOD FOR AUSTEMPERED DUCTILE IRON

The present paper examines and compares the influence of austempering parameters such as temperature and time on the isothermal transformation and microstructural changes of ductile iron. To identify the compositional and structural changes during an isothermal transformation, a very wide austempering period is chosen at a transformation temperature for the precise determination of the process window. XRD, optical, and scanning electron microscopic techniques are exploited to identify and analyze the changes in the austempered structure, at austempering temperatures of 250°C and 400°C. The various structural parameters like austenite volume fraction (Vg, its carbon content (Cg), lattice parameter, and the average cell size of the ferrite are ascertained. Electron backscattered diffraction (EBSD) analysis is used to identify the carbide precipitation obtained due to the austempering Stage-II reaction. It is noticed that, at the end of the austempering Stage-II reaction, there is a significant reduction in the volume fraction of stabilized austenite and it’s carbon content, as the microstructure at this stage not only contains ausferrite but also additional precipitated iron carbides. With an increase in austempering time, the austenite and ferrite volume fraction increase until the austenite becomes stabilized with sufficient carbon. The increase in the lattice parameter of the austenite during austempering corresponds to the rise in carbon content within the austenite. A rise in the austempering temperature leads to a reduction in the volume fraction of the ferrite and an increase in the stabilized austenite volume fraction. The optimum isothermal transformation period for austempered ductile iron is established, based on the period during which the maximum content of the austenite volume fraction, its carbon, the lattice parameter, and the average cell size of the ferrite are maintained

Aluminized polyborate catalyzed efficient solvent-free synthesis of 1,8-dioxo-decahydroacridines via hantzsch condensation

In this work we report, aluminized polyborate catalyzed facile and efficient one-pot four component Hantzsch synthesis of 1,8-dioxo-decahydroacridines using substituted aromatic aldehydes (1 mmol), dimedone (2 mmol) and ammonium acetate (1.5 mmol) at 95-100oC under solvent-free condition. The prominent advantages of this methodology are good product yields (85-95%), eco-friendliness, mild reaction conditions and use of inexpensive catalyst. The structures of the targeted molecules were examined by FT-IR, 1H-NMR and mass spectral techniques