3,482 research outputs found
Single particle slow dynamics of confined water
Molecular dynamics simulations of SPC/E water confined in a Silica pore are
presented. The simulations have been performed at different hydration levels
and temperatures to study the single-particle dynamics. Due to the confinement
and to the presence of a hydrophilic surface, the dynamic behaviour of the
liquid appears to be strongly dependent on the hydration level. On lowering
temperature and/or hydration level the intermediate scattering function
displays a double-step relaxation behaviour whose long time tail is strongly
non-exponential. At higher hydrations two quite distinct subsets of water
molecules are detectable. Those belonging to the first two layers close to the
substrate suffer a severe slowing down already at ambient temperature. While
the behaviour of the remaining ones is more resemblant to that of supercooled
bulk SPC/E water. At lower hydrations and/or temperatures the onset of a slow
dynamics due to the cage effect and a scenario typical of supercooled liquids
approaching the kinetic glass transition is observed. Moreover, for low
hydrations and/or temperatures, the intermediate scattering function clearly
displays an overshoot, which can be assigned to the so called ``Boson Peak''.Comment: 7 pages with one table and 8 figures; revTeX style. Based on an
invited talk presented at the International Bunsed Discussion Meeting on
"Metastable Water", Sept. 1999. In press on PCCP (2000
Local order in aqueous solutions of rare gases and the role of the solute concentration: a computer simulation study with a polarizable potential
Aqueous solutions of rare gases are studied by computer simulation employing
a polarizable potential for both water and solutes. The use of a polarizable
potential allows to study the systems from ambient to supercritical conditions
for water. In particular the effects of increasing the concentration and the
size of the apolar solutes are considered in an extended range of temperatures.
By comparing the results at increasing temperature it appears clearly the
change of behaviour from the tendency to demix at ambient conditions to a
regime of complete solubility in the supercritical region. In this respect the
role of the hydrogen bond network of water is evidenced.Comment: Accepted for publication in Molecular Physics 2004. 19 pages, 10
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Microscopic mechanism of protein cryopreservation in an aqueous solution with trehalose
In order to investigate the cryoprotective mechanism of trehalose on proteins, we use molecular dynamics computer simulations to study the microscopic dynamics of water upon cooling in an aqueous solution of lysozyme and trehalose. We find that the presence of trehalose causes global retardation of the dynamics of water. Comparing aqueous solutions of lysozyme with/without trehalose, we observe that the dynamics of water in the hydration layers close to the protein is dramatically slower when trehalose is present in the system. We also analyze the structure of water and trehalose around the lysozyme and find that the trehalose molecules form a cage surrounding the protein that contains very slow water molecules. We conclude that the transient cage of trehalose molecules that entraps and slows the water molecules prevents the crystallisation of protein hydration water upon cooling.DC, EGS, and HES thank the NSF chemistry Division for support (Grants CHE-1213217, CHE-0911389, and CHE-0908218). PG gratefully acknowledges the computational support reveived by the INFN RM3-GRID at Roma Tre University. (CHE-1213217 - NSF chemistry Division; CHE-0911389 - NSF chemistry Division; CHE-0908218 - NSF chemistry Division)Published versio
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