21 research outputs found
Behaviour of the antioxidant tert-butylhydroquinone on the storage stability and corrosive character of biodiesel
AbstractThe behaviour of the antioxidant tert-butylhydroquinone (TBHQ) on the storage stability of biodiesel was investigated. Storage conditions were simulated through static immersion corrosion tests in biodiesel (with and without TBHQ) using copper coupons. Measurements of oxidation stability (Rancimat induction period) and metal release at different stages of corrosion were performed. After 24h of the static immersion test, the neat and TBHQ-doped biodiesels presented induction times below the EN 14214 limit (6h). Copper release was more intense in the neat biodiesel which evidenced that TBHQ retarded the corrosion process as a corrosion inhibitor. Ion trap–time-of-flight mass spectrometry (IT–TOF-MS) revealed the presence of considerable amounts of tert-butylquinone (TBQ) in the TBHQ-doped biodiesel exposed to the corrosion process. As TBHQ molecules adsorb at the copper surface to inhibit corrosion, these molecules are catalytically oxidised to TBQ. IT–TOF-MS also indicated the formation of new molecules of high molecular weight only presented in the TBHQ-doped biodiesel deteriorated by the corrosion process. MS2 spectra gave clear evidence of the formation of new complexes between free radicals of long-chain molecules (fatty acid derivatives) and TBQ radicals during biodiesel deterioration
Genetic Homogeneity of the Invasive Lionfish Across the Northwestern Atlantic and the Gulf of Mexico Based On Single Nucleotide Polymorphisms
Despite the devastating impact of the lionfish (Pterois volitans) invasion on NW Atlantic ecosystems, little genetic information about the invasion process is available. We applied Genotyping by Sequencing techniques to identify 1,220 single nucleotide polymorphic sites (SNPs) from 162 lionfish samples collected between 2013 and 2015 from two areas chronologically identified as the first and last invaded areas in US waters: the east coast of Florida and the Gulf of Mexico. We used population genomic analyses, including phylogenetic reconstruction, Bayesian clustering, genetic distances, Discriminant Analyses of Principal Components, and coalescence simulations for detection of outlier SNPs, to understand genetic trends relevant to the lionfish’s long-term persistence. We found no significant differences in genetic structure or diversity between the two areas (FST p-values \u3e 0.01, and t-test p-values \u3e 0.05). In fact, our genomic analyses showed genetic homogeneity, with enough gene flow between the east coast of Florida and Gulf of Mexico to erase previous signals of genetic divergence detected between these areas, secondary spreading, and bottlenecks in the Gulf of Mexico. These findings suggest rapid genetic changes over space and time during the invasion, resulting in one panmictic population with no signs of divergence between areas due to local adaptation
Deep-sequencing reveals broad subtype-specific HCV resistance mutations associated with treatment failure
A percentage of hepatitis C virus (HCV)-infected patients fail direct acting antiviral (DAA)-based treatment regimens, often because of drug resistance-associated substitutions (RAS). The aim of this study was to characterize the resistance profile of a large cohort of patients failing DAA-based treatments, and investigate the relationship between HCV subtype and failure, as an aid to optimizing management of these patients. A new, standardized HCV-RAS testing protocol based on deep sequencing was designed and applied to 220 previously subtyped samples from patients failing DAA treatment, collected in 39 Spanish hospitals. The majority had received DAA-based interferon (IFN) a-free regimens; 79% had failed sofosbuvir-containing therapy. Genomic regions encoding the nonstructural protein (NS) 3, NS5A, and NS5B (DAA target regions) were analyzed using subtype-specific primers. Viral subtype distribution was as follows: genotype (G) 1, 62.7%; G3a, 21.4%; G4d, 12.3%; G2, 1.8%; and mixed infections 1.8%. Overall, 88.6% of patients carried at least 1 RAS, and 19% carried RAS at frequencies below 20% in the mutant spectrum. There were no differences in RAS selection between treatments with and without ribavirin. Regardless of the treatment received, each HCV subtype showed specific types of RAS. Of note, no RAS were detected in the target proteins of 18.6% of patients failing treatment, and 30.4% of patients had RAS in proteins that were not targets of the inhibitors they received. HCV patients failing DAA therapy showed a high diversity of RAS. Ribavirin use did not influence the type or number of RAS at failure. The subtype-specific pattern of RAS emergence underscores the importance of accurate HCV subtyping. The frequency of “extra-target” RAS suggests the need for RAS screening in all three DAA target regions
Development of an indirect ELISA to detect Corynebacterium pseudotuberculosis specific antibodies in sheep employing T1 strain culture supernatant as antigen
Corynebacterium pseudotuberculosis is the etiologic agent of caseous lymphadenitis (CLA), a chronic disease that affects goats and sheep, characterized by granuloma formation in subcutaneous and internal lymph nodes. CLA causes significant economic losses to commercial goat herds. In this study, we aimed to test secreted antigens secreted from T1 strain bacteria grown in brain heart infusion (BHI) broth in an indirect ELISA system to determine the presence of specific immunoglobulins against C. pseudotuberculosis. We analyzed the BHI antigen electrophoretic profile and the recognition pattern by infected sheep sera samples. The ELISA results were compared with multiplex PCR assay and IFN-gamma production. The ELISA was able to discriminate between negative and positive animals, with a sensitivity of 89% and a specificity of 99%, using microbiological isolation as gold standard. When this assay was compared with multiplex PCR and specific IFN-gamma quantification, six discrepant results were found among thirty-two samples. We concluded that the ELISA using antigens secreted from C. pseudotuberculosis T1 strain growth in BHI broth culture can be used for the serodiagnosis of CLA in sheep
Statistics of particle dispersion in direct numerical simulations of wall-bounded turbulence: Results of an international collaborative benchmark test
In this paper, the results of an international collaborative test case relative to the pro-duction of a Direct Numerical Simulation and Lagrangian Particle Tracking database forturbulent particle dispersion in channel flow at low Reynolds number are presented. Theobjective of this test case is to establish a homogeneous source of data relevant to the generalproblem of particle dispersion in wall-bounded turbulence. Different numerical approachesand computational codes have been used to simulate the particle-laden flow and calculationshave been carried on long enough to achieve a statistically-steady condition for particle distri-bution. In such stationary regime, a comprehensive database including both post-processedstatistics and raw data for the fluid and for the particles has been obtained. The completedatasets can be downloaded from the web at http://cfd.cineca.it/cfd/repository/