Prospecting for new questions: integrating geophysics to define anthropological research objectives and inform excavation strategies at monumental sites

Geophysical data have the potential to significantly contribute to archaeological research projects when effectively integrated with more traditional methods. Although pre-existing archaeological questions about a site may be answered using geophysical methods, beginning an investigation with an extensive geophysical survey can assist in understanding the function and archaeological potential of a site, and may even transform preconceptions about the type and spatial organisation of features that are present. In this way, these prospection tools not only accurately locate and map features to allow recovery of cultural material for identification and dating, we argue that they can go much further, allowing us to prospect for new and appropriate archaeological and anthropological research questions. Such an approach is best realised when geophysical and traditional archaeologists work together to define new objectives and strategies to address them, and by maintaining this collaboration to allow continual feedback between geophysical and archaeological data. A flexible research design is therefore essential in order to allow the methodologies to adapt to the site, the results, and the questions being posed. This methodology is demonstrated through two case studies from mound sites in southeast USA: the transitional Mississippian Washausen site in Illinois; and the Middle Woodland Garden Creek site in North Carolina. In both cases, integrating geophysical methods throughout the archaeological investigations has resulted in multiple phases of generating and addressing new research objectives. Although clearly beneficial at these two mound sites in southeast USA, this interdisciplinary approach has obvious implications well beyond these temporal and geographical areas

Prospecting for new questions: integrating geophysics to define anthropological research objectives and inform excavation strategies at monumental sites

Geophysical data have the potential to significantly contribute to archaeological research projects when effectively integrated with more traditional methods. Although pre-existing archaeological questions about a site may be answered using geophysical methods, beginning an investigation with an extensive geophysical survey can assist in understanding the function and archaeological potential of a site, and may even transform preconceptions about the type and spatial organisation of features that are present. In this way, these prospection tools not only accurately locate and map features to allow recovery of cultural material for identification and dating, we argue that they can go much further, allowing us to prospect for new and appropriate archaeological and anthropological research questions. Such an approach is best realised when geophysical and traditional archaeologists work together to define new objectives and strategies to address them, and by maintaining this collaboration to allow continual feedback between geophysical and archaeological data. A flexible research design is therefore essential in order to allow the methodologies to adapt to the site, the results, and the questions being posed. This methodology is demonstrated through two case studies from mound sites in southeast USA: the transitional Mississippian Washausen site in Illinois; and the Middle Woodland Garden Creek site in North Carolina. In both cases, integrating geophysical methods throughout the archaeological investigations has resulted in multiple phases of generating and addressing new research objectives. Although clearly beneficial at these two mound sites in southeast USA, this interdisciplinary approach has obvious implications well beyond these temporal and geographical areas

Tidal sedimentary dynamics of the Early Pleistocene Messina Strait (Calabria, southern Italy) based on its modern analogue

The Messina Strait excursion opens a series of geological field trips associated with the 10th International Congress of Tidal Sedimentology (Tidalites), Matera, Italy, 5-7 October 2021. This guide aims at documenting a number of selected outcrops located along the eastern margin of the modern Messina Strait, in order to illustrate the sedimentary dynamics of the Early Pleistocene tide-dominated Messina Strait. Since the Pliocene, this extensional basin separated Sicily from Calabria, forming a wide non-tidal seaway. Successively, this basin turned into a ca. 10-15 km-wide and 40 km-long, tide-dominated strait during the Early Pleistocene, prior to its definitive closure following a Middle Pleistocene phase of tectonic uplift. As for today in its modern analogue, the ancient strait acted as a major conduit for marine water exchanges between the Ionian and the Tyrrhenian seas. Semi-diurnal, reverse bidirectional tidal currents flowed in phase opposition parallel to the strait margins, being subject to tidal amplification due to bathymetric restriction across the shallower strait-centre zone. This oceanographic setting partitioned the strait into specific environments. Nowadays, their sedimentary record is exposed in a series of outcrops across the western (Sicily) and eastern (Calabria) margins of the modern strait. A series of stops along a south-to-north transect covers a total distance of ca. 20 km. Outcrops of the first day show coarse-grained deposits lying adjacent to a block-faulted central horst and transgressively overlain by cross-stratified, mixed bioclastic-siliciclastic arenites. These strata record bypass and residual sedimentation in the strait-centre zone of the ancient system. The second day, large- and medium-scale cross-stratification exhibiting a variety of tidal sedimentary indicators are observed, interpreted as the ancient northern tidal dune field. The third day focuses on one major section representing the north-eastern flank of the ancient strait, where subaqueous canyon-fill strata, mass-wasting deposits and tide-influenced delta front-facies are exposed

Beyond Never-Never Land: Integrating LiDAR and Geophysical Surveys at the Johnston Site, Pinson Mounds State Archaeological Park, Tennessee, USA

Archaeologists often use near-surface geophysics or LiDAR-derived topographic imagery in their research. However, rarely are the two integrated in a way that offers a robust understanding of the complex historical palimpsests embedded within a social landscape. In this paper we present an integrated aerial and terrestrial remote sensing program at the Johnston Site, part of the larger Pinson Mounds landscape in the American MidSouth. Our work at Johnston was focused on better understanding the history of human landscape use and change so that we can begin to compare the Johnston Site with other large Middle Woodland (200 BC-AD 500) ceremonial centers in the region. Our research allowed us to examine the accuracy of an early map of the Johnston Site made in the early 20th century. However, our integrated remote sensing approach allows us to go well beyond testing the usefulness of the map; it helps identify different uses of the site through time and across space. Our research emphasizes the importance of an integrated remote sensing methodology when examining complex social landscapes of the past and present

Beyond Never-Never Land: Integrating LiDAR and Geophysical Surveys at the Johnston Site, Pinson Mounds State Archaeological Park, Tennessee, USA

Archaeologists often use near-surface geophysics or LiDAR-derived topographic imagery in their research. However, rarely are the two integrated in a way that offers a robust understanding of the complex historical palimpsests embedded within a social landscape. In this paper we present an integrated aerial and terrestrial remote sensing program at the Johnston Site, part of the larger Pinson Mounds landscape in the American MidSouth. Our work at Johnston was focused on better understanding the history of human landscape use and change so that we can begin to compare the Johnston Site with other large Middle Woodland (200 BC-AD 500) ceremonial centers in the region. Our research allowed us to examine the accuracy of an early map of the Johnston Site made in the early 20th century. However, our integrated remote sensing approach allows us to go well beyond testing the usefulness of the map; it helps identify different uses of the site through time and across space. Our research emphasizes the importance of an integrated remote sensing methodology when examining complex social landscapes of the past and present

Next-generation ensemble projections reveal higher climate risks for marine ecosystems

Projections of climate change impacts on marine ecosystems have revealed long-term declines in global marine animal biomass and unevenly distributed impacts on fisheries. Here we apply an enhanced suite of global marine ecosystem models from the Fisheries and Marine Ecosystem Model Intercomparison Project (Fish-MIP), forced by new-generation Earth system model outputs from Phase 6 of the Coupled Model Intercomparison Project (CMIP6), to provide insights into how projected climate change will affect future ocean ecosystems. Compared with the previous generation CMIP5-forced Fish-MIP ensemble, the new ensemble ecosystem simulations show a greater decline in mean global ocean animal biomass under both strong-mitigation and high-emissions scenarios due to elevated warming, despite greater uncertainty in net primary production in the high-emissions scenario. Regional shifts in the direction of biomass changes highlight the continued and urgent need to reduce uncertainty in the projected responses of marine ecosystems to climate change to help support adaptation planning

Role of RhoA and rho kinase in lysophosphatidic acid-induced endothelial barrier dysfunction.

The online version of this article, along with updated information and services, is located on th

Consensus Pathways Implicated in Prognosis of Colorectal Cancer Identified Through Systematic Enrichment Analysis of Gene Expression Profiling Studies

Background: A large number of gene expression profiling (GEP) studies on prognosis of colorectal cancer (CRC) has been performed, but no reliable gene signature for prediction of CRC prognosis has been found. Bioinformatic enrichment tools are a powerful approach to identify biological processes in high-throughput data analysis. Principal Findings: We have for the first time collected the results from the 23 so far published independent GEP studies on CRC prognosis. In these 23 studies, 1475 unique, mapped genes were identified, from which 124 (8.4%) were reported in at least two studies, with 54 of them showing consisting direction in expression change between the single studies. Using these data, we attempted to overcome the lack of reproducibility observed in the genes reported in individual GEP studies by carrying out a pathway-based enrichment analysis. We used up to ten tools for overrepresentation analysis of Gene Ontology (GO) categories or Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways in each of the three gene lists (1475, 124 and 54 genes). This strategy, based on testing multiple tools, allowed us to identify the oxidative phosphorylation chain and the extracellular matrix receptor interaction categories, as well as a general category related to cell proliferation and apoptosis, as the only significantly and consistently overrepresented pathways in the three gene lists, which were reported by several enrichment tools. Conclusions: Our pathway-based enrichment analysis of 23 independent gene expression profiling studies on prognosis of CRC identified significantly and consistently overrepresented prognostic categories for CRC. These overrepresented categories have been functionally clearly related with cancer progression, and deserve further investigation