INTEGRAL observations of V0332+53 in outburst

We present the analysis of a 100ksec Integral(3-100kev) observation of the transient X-ray pulsar V0332+53 inoutburst. The source is pulsating at P=4.3751+/-0.0002s with a clear double pulse from 6 kev to 60 kev. The average flux was ~550mCrab between 20 kev and 60 kev. We modeled the broad band continuum from 5 kev to 100 kev with a power-law modified by an exponential cut off. We observe three cyclotron lines: the fundamental line at 24.9+/-0.1 kev, the first harmonic at 50.5+/-0.1 kev as well as the second harmonic at71.7+/-0.8 kev, thus confirming the discovery of the harmonic lines by Coburn et al. (2005) in RXTE data.Comment: 4 pages, 3 figures. Accepted for publication in A&A Letter

Study of the cyclotron feature in MXB 0656-072

We have monitored a type II outburst of the Be/X-ray binary MXB 0656−072 in a series of pointed RXTE observations during October through December 2003. The source spectrum shows a cyclotron resonance scattering feature at 32.8 +0.5 −0.4 keV, corresponding to a magnetic field strength of 3.67 +0.06 −0.04 × 10 12 G and is stable through the outburst and over the pulsar spin phase. The pulsar, with an average pulse period of 160.4 ± 0.4s,shows a spin-up of 0.45 s over the duration of the outburst. From optical data, the source distance is estimated to be 3.9 ± 0.1 kpc and this is used to estimate the X-ray luminosity and a theoretical prediction of the pulsar spin-up during the outburst

Discovery of new quasi-periodic oscillations in the X-ray transient source V~0332+53

We report the discovery of a new quasi-period oscillation (QPO) at 0.22 Hz, centered on the source spin frequency of the high mass X-ray binary system V~0332+53 when the source was observed during its November 2004/March 2005 outburst by {\em RXTE}. Besides this new QPO, we also detected the known 0.05 Hz QPO. Both the 0.22 and 0.05 Hz QPOs stand out clearly at a mid-flux level of the outburst within January 15--19 2005, and later at an even lower flux level as the width of 0.22 Hz QPO drops. No evolution of the centroid frequency with the flux is seen in either QPO. The rms value below 10 keV is around 4--6% for both QPOs and decreases at higher energies. We discuss our results in the context of current QPO models.Comment: 5 figures, 12 pages. AASTex preprint style. (In 2005, ApJ Let., 629, L33

Timing and Spectroscopy of Accreting X-ray Pulsars: the State of Cyclotron Line Studies

A great deal of emphasis on timing in the RXTE era has been on pushing toward higher and higher frequency phenomena, particularly kHz QPOs. However, the large areas of the RXTE pointed instruments provide another capability which is key for the understanding of accreting X-ray pulsars -- the ability to accumulate high quality spectra in a limited observing time. For the accreting X-ray pulsars, with their relatively modest spin frequencies, this translates into an ability to study broad band spectra as a function of pulse phase. This is a critical tool, as pulsar spectra are strong functions of the geometry of the "accretion mound" and the observers' viewing angle to the ~10^12 G magnetic field. In particular, the appearance of "cyclotron lines" is sensitively dependent on the viewing geometry, which must change with the rotation of the star. These spectral features, seen in only a handful of objects, are quite important, as they give us our only direct measure of neutron star magnetic fields. Furthermore, they carry a great deal of information as to the geometry and physical conditions in the accretion mound. In this paper, we review the status of cyclotron line studies with the RXTE. We present an overview of phase-averaged results and give examples of observations which illustrate the power of phase-resolved spectroscopy.Comment: 8 pages, 13 figures. to appear in the proceedings of "X-Ray Timing 2003: Rossi and Beyond", eds. P. Kaaret, F.K. Lamb, & J.H. Swank (Melville, NY: AIP

Confirmation of Two Cyclotron Lines in Vela X-1

We present pulse phase-resolved X-ray spectra of the high mass X-ray binary Vela X-1 using the Rossi X-ray Timing Explorer. We observed Vela X-1 in 1998 and 2000 with a total observation time of ~90 ksec. We find an absorption feature at 23.3 +1.3 -0.6 kev in the main pulse, that we interpret as the fundamental cyclotron resonant scattering feature (CRSF). The feature is deepest in the rise of the main pulse where it has a width of 7.6 +4.4 -2.2 kev and an optical depth of 0.33 +0.06 -0.13. This CRSF is also clearly detected in the secondary pulse, but it is far less significant or undetected during the pulse minima. We conclude that the well known CRSF at 50.9 +0.6 -0.7 kev, which is clearly visible even in phase-averaged spectra, is the first harmonic and not the fundamental. Thus we infer a magnetic field strength of B=2.6 x 10^12 G.Comment: 12 pages, LaTeX, 15 Figures, accepted by A&

Lorentz violating electrodynamics

After summarizing the most interesting results in the calculation of synchrotron radiation in the Myers-Pospelov effective model for Lorentz invariance violating (LIV) electrodynamics, we present a general unified way of describing the radiation regime of LIV electrodynamics which include the following three different models : Gambini-Pullin, Ellis et al. and Myers-Pospelov. Such unification reduces to the standard approach of radiation in a dispersive and absortive (in general) medium with a given index of refraction. The formulation is presented up to second order in the LIV parameter and it is explicitly applied to the synchrotron radiation case.Comment: 11 pages, extended version of the talk given by L.F. Urrutia in the VI Mexican School: Approaches to Quantum Gravity, Playa del Carmen, Mexico, Nov. 2004. Minor chages in the text and added reference

Performance characteristics of next-generation sequencing for the detection of antimicrobial resistance determinants in Escherichia coli genomes and metagenomes

Short-read sequencing can provide detection of multiple genomic determinants of antimicrobial resistance from single bacterial genomes and metagenomic samples. Despite its increasing application in human, animal, and environmental microbiology, including human clinical trials, the performance of short-read Illumina sequencing for antimicrobial resistance gene (ARG) detection, including resistance-conferring single nucleotide polymorphisms (SNPs), has not been systematically characterized. Using paired-end 2 x 150 bp (base pair) Illumina sequencing and an assembly-based method for ARG prediction, we determined sensitivity, positive predictive value (PPV), and sequencing depths required for ARG detection in an Escherichia coli isolate of sequence type (ST) 38 spiked into a synthetic microbial community at varying abundances. Approximately 300,000 reads or 15x genome coverage was sufficient to detect ARGs in E. coli ST38, with comparable sensitivity and PPV to ~100x genome coverage. Using metagenome assembly of mixed microbial communities, ARG detection at E. coli relative abundances of 1% would require assembly of approximately 30 million reads to achieve 15x target coverage. The minimum sequencing depths were validated using public data sets of 948 E. coli genomes and 10 metagenomic rectal swab samples. A read-based approach using k-mer alignment (KMA) for ARG prediction did not substantially improve minimum sequencing depths for ARG detection compared to assembly of the E. coli ST38 genome or the combined metagenomic samples. Analysis of sequencing depths from recent studies assessing ARG content in metagenomic samples demonstrated that sequencing depths had a median estimated detection frequency of 84% (interquartile range: 30%-92%) for a relative abundance of 1%. IMPORTANCE Systematically determining Illumina sequencing performance characteristics for detection of ARGs in metagenomic samples is essential to inform study design and appraisal of human, animal, and environmental metagenomic antimicrobial resistance studies. In this study, we quantified the performance characteristics of ARG detection in E. coli genomes and metagenomes and established a benchmark of ~15x coverage for ARG detection for E. coli in metagenomes. We demonstrate that for low relative abundances, sequencing depths of ~30 million reads or more may be required for adequate sensitivity for many applications

Implications of the γ\gamma-ray Polarization of GRB 021206

We compare two possible scenarios for the producing of high level of polarization within the prompt emission of a GRB: synchrotron emission from a relativistic jet with a uniform (in space and time) magnetic field and synchrotron emission from a jet with a random magnetic field in the plane of the shock. Somewhat surprisingly we find that both scenarios can produce a comparable level of polarization ($\sim 45-50$% for the uniform field and $\sim 30-35$% for a random field). Uniform time independent field most naturally arises by expansion of the field from the compact object. It requires a $10^{12}$G field at the source and a transport of the field as $\propto R^{-1}$. It {\it does not} imply Poynting flux domination of the energy of the wind. There is a serious difficulty however, within this scenario, accounting for particle acceleration (which requires random magnetic fields) both for Poynting flux and non-Poynting flux domination. Significant polarization can also arise from a random field provided that the observer is located within $1/\Gamma$ orientation from a narrow ($\theta_j \sim 1/\Gamma$) jet. While most jets are wider, the jet of GRB 021206 from which strong polarization was recently observed, was most likely very narrow. GRB 021206 is among the strongest bursts ever. Adopting the energy-angle relation we find an estimated angle of $<1/40$rad or even smaller. Thus, for this particular burst the required geometry is not unusual. We conclude that the RHESSI observations suggest that the prompt emission results from synchrotron radiation. However, in view of the comparable levels of polarizations predicted by both the random field and the homogeneous field scenarios these observations are insufficient to rule out or confirm either one.Comment: 14 pages, 4 figure