On the size and shape of excluded volume polymers confined between parallel plates

A number of recent experiments have provided detailed observations of the configurations of long DNA strands under nano-to-micrometer sized confinement. We therefore revisit the problem of an excluded volume polymer chain confined between two parallel plates with varying plate separation. We show that the non-monotonic behavior of the overall size of the chain as a function of plate-separation, seen in computer simulations and reproduced by earlier theories, can already be predicted on the basis of scaling arguments. However, the behavior of the size in a plane parallel to the plates, a quantity observed in recent experiments, is predicted to be monotonic, in contrast to the experimental findings. We analyze this problem in depth with a mean-field approach that maps the confined polymer onto an anisotropic Gaussian chain, which allows the size of the polymer to be determined separately in the confined and unconfined directions. The theory allows the analytical construction of a smooth cross-over between the small plate-separation de Gennes regime and the large plate-separation Flory regime. The results show good agreement with Langevin dynamics simulations, and confirm the scaling predictions.Comment: 15 pages, 3 figure

Density Waves Inside Inner Lindblad Resonance: Nuclear Spirals in Disk Galaxies

We analyze formation of grand-design two-arm spiral structure in the nuclear regions of disk galaxies. Such morphology has been recently detected in a number of objects using high-resolution near-infrared observations. Motivated by the observed (1) continuity between the nuclear and kpc-scale spiral structures, and by (2) low arm-interarm contrast, we apply the density wave theory to explain the basic properties of the spiral nuclear morphology. In particular, we address the mechanism for the formation, maintenance and the detailed shape of nuclear spirals. We find, that the latter depends mostly on the shape of the underlying gravitational potential and the sound speed in the gas. Detection of nuclear spiral arms provides diagnostics of mass distribution within the central kpc of disk galaxies. Our results are supported by 2D numerical simulations of gas response to the background gravitational potential of a barred stellar disk. We investigate the parameter space allowed for the formation of nuclear spirals using a new method for constructing a gravitational potential in a barred galaxy, where positions of resonances are prescribed.Comment: 18 pages, 9 figures, higher resolution available at http://www.pa.uky.edu/~ppe/papers/nucsp.ps.g

Ultraviolet Signposts of Resonant Dynamics in the Starburst-Ringed Sab Galaxy, M94 (NGC 4736)

M94 (NGC 4736) is investigated using images from the Ultraviolet Imaging Telescope (FUV-band), Hubble Space Telescope (NUV-band), Kitt Peak 0.9-m telescope (H-alpha, R, and I bands), and Palomar 5-m telescope (B-band), along with spectra from the International Ultraviolet Explorer and Lick 1-m telescopes. The wide-field UIT image shows FUV emission from (a) an elongated nucleus, (b) a diffuse inner disk, where H-alpha is observed in absorption, (c) a bright inner ring of H II regions at the perimeter of the inner disk (R = 48 arcsec. = 1.1 kpc), and (d) two 500-pc size knots of hot stars exterior to the ring on diametrically opposite sides of the nucleus (R= 130 arcsec. = 2.9 kpc). The HST/FOC image resolves the NUV emission from the nuclear region into a bright core and a faint 20 arcsec. long ``mini-bar'' at a position angle of 30 deg. Optical and IUE spectroscopy of the nucleus and diffuse inner disk indicates an approximately 10^7 or 10^8 yr-old stellar population from low-level starbirth activity blended with some LINER activity. Analysis of the H-alpha, FUV, NUV, B, R, and I-band emission along with other observed tracers of stars and gas in M94 indicates that most of the star formation is being orchestrated via ring-bar dynamics involving the nuclear mini-bar, inner ring, oval disk, and outer ring. The inner starburst ring and bi-symmetric knots at intermediate radius, in particular, argue for bar-mediated resonances as the primary drivers of evolution in M94 at the present epoch. Similar processes may be governing the evolution of the ``core-dominated'' galaxies that have been observed at high redshift. The gravitationally-lensed ``Pretzel Galaxy'' (0024+1654) at a redshift of approximately 1.5 provides an important precedent in this regard.Comment: revised figure 1 (corrected coordinate labels on declination axis); 19 pages of text + 19 figures (jpg files); accepted for publication in A

Non-circular Gas Kinematics and Star Formation in the Ringed Galaxy NGC 4736

We analyze the gas kinematics and star formation properties of the nearby RSab galaxy NGC 4736 using interferometric and single-dish CO(1-0) data and previously published Halpha and HI data. The CO morphology is dominated by a central molecular bar and tightly wound spiral arms associated with a bright ring of star formation. Strong HI emission is also found in the ring, but HI is absent from the central regions. Comparison of the HI and Halpha distributions suggests that HI in the ring is primarily dissociated H$_2$. Modeling of the CO kinematics reveals gas motion in elliptical orbits around the central bar, and we argue that the ring represents both the OLR of the bar and the ILR of a larger oval distortion. The HI kinematics show evidence for axisymmetric inflow towards the ring and are inconsistent with streaming in aligned elliptical orbits, but the highly supersonic (~40 km/s) inflow velocities required, corresponding to mass inflow rates of ~2 Msol/yr, suggest that more sophisticated models (e.g., gas orbiting in precessed elliptical orbits) should be considered. The radial CO and Halpha profiles are poorly correlated in the vicinity of the nuclear bar, but show a better correlation (in rough agreement with the Schmidt law) at the ring. Even along the ring, however, the azimuthal correspondence between CO and Halpha is poor, suggesting that massive stars form more efficiently at some (perhaps resonant) locations than at others. These results indicate that the star formation rate per unit gas mass exhibits strong spatial variations and is not solely a function of the available gas supply. The localization of star formation to the ring is broadly consistent with gravitational instability theory, although the instability parameter $Q \sim 3$ on average in the ring, only falling below 1 in localized regions.Comment: Revised version accepted by ApJ, with new section on p-v diagrams. 24 pages with 24 figures (emulateapj5). Full resolution and color versions are available at http://astro.berkeley.edu/~twong/preprint

Applications of graphics to support a testbed for autonomous space vehicle operations

Researchers describe their experience using graphics tools and utilities while building an application, AUTOPS, that uses a graphical Machintosh (TM)-like interface for the input and display of data, and animation graphics to enhance the presentation of results of autonomous space vehicle operations simulations. AUTOPS is a test bed for evaluating decisions for intelligent control systems for autonomous vehicles. Decisions made by an intelligent control system, e.g., a revised mission plan, might be displayed to the user in textual format or he can witness the effects of those decisions via out of window graphics animations. Although a textual description conveys essentials, a graphics animation conveys the replanning results in a more convincing way. Similarily, iconic and menu-driven screen interfaces provide the user with more meaningful options and displays. Presented here are experiences with the SunView and TAE Plus graphics tools used for interface design, and the Johnson Space Center Interactive Graphics Laboratory animation graphics tools used for generating out out of the window graphics

DIVERSIFICATION OF PYRROLIZIDINE ALKALOIDS AS PLANT DEFENCE COMPOUNDS AND THEIR EFFECT ON Spodoptera exigua CELL LINES

Pyrrolizidine alkaloids (PAs) are part of the constitutive chemical defence against herbivores. PA composition in plants is strongly determined by the environment, mostly in an unpredictable way. In this study the ability of different Jacobaea tissue cultures types including shoot, root and complete plants to produce and diversify PAs was evaluated. Jacobaea vulgaris, Jacobaea aquatica and three hybrids of a cross were used representing different genotypes. The cultures were harvested after nine weeks and PA content was measured using LC-MS/MS. We observed that not only roots, as known so far, but also shoots were able to synthesise de-novo PAs. Significant differences in total concentration of PAs were observed with the lowest concentration in the roots, followed by shoots and the highest concentration in complete plants. Evaluation of PA composition showed that senecionine- and otosenine-like PAs were present in both roots and shoots while next to senecionine-like PAs, jacobine- and erucifoline-like PAs occurred in the shoots and complete plants. Among these PAs, jacobine and erucifoline are the most effective against insect herbivores as indicated by correlative studies. In this way, the above-ground plants that suffer from herbivore attack are better defended. To test this, the two PAs and other commercially available senecionine­like PAs including, senecionine, seneciphylline, retrorsine, and senkirkine were tested as free base and N-oxide forms. A range of concentrations from 0 70 ppm was added to Spodoptera exigua cell line. The result showed jacobine and erucifoline appeared to be the most toxic PAs proving their major role in plant defence against generalist herbivores. Senkirkine and seneciphylline showed a lower toxicity than jacobine and erucifoline but higher than retrorsine. Senecionine was not toxic at the tested concentrations. In all toxic PAs the free base form was more toxic than the N-oxide form. The results obtained give us an insight in what plant organs PAs are produced and how there are distributed over different plant organs, that have great relevance to understand their role in plant defense.Keywords: Jacobaea, Spodoptera exigua, pyrrolizidine alkaloids, diversification, toxicity

Limiting mechanisms for photon recycling in thin-film GaAs solar cells

Photon recycling mechanisms in single junction thin-film GaAs solar cells are evaluated in this study. Modelling supported by experimentally obtained results is used in order to correlate the reflectance of the cell's rear layers, the photon recycling probability, and the solar cell performance. Solar cells with different top and bottom metallization configurations are produced, and their performance is analyzed from the optical and electrical point of view. It is shown that the photon recycling probability increases with the rear mirror reflectance and solar cell thickness, which results in the increase of the devices open circuit voltage. However, the front grid coverage, usually disregarded in rear mirror focused studies, strongly reduces the photon recycling probability. Furthermore, perimeter and interface recombination hinder the internal radiative efficiency of the solar cells, preventing further increase of the devices' open circuit voltage as a result of improvements of the rear mirror reflectivity. In order to exploit the significant benefit of increased photon recycling probability to the solar cell performance, these limiting mechanisms need to be properly addressed