Surgical Aspects of Genitourinary Bilharzia

The blood fluke Schistosoma haematobium mainly affects the lower genitourinary tract, where the pathological effects are a result of the reaction to the schistosome ova. The chronic effects cause damage to the musculature of the urinary tract resulting in scarring and fibrosis. The ureters dilate and or stricture. Contracture of the bladder and or detrussor failure may occur. Secondary calculi in the upper tracts and bladder are common. There is strong association with bladder cancer development of the squamous cell type. Emphasis is on the prevention of the infestation

Compositional and Thickness Effects on the Optical Properties of Zinc–Doped Selenium–Antimony Thin Films

Chalcogenide system of antimony (Sb)-selenium (Se)-zinc (Zn) system is a promising semiconductor for phase change memory devices due to its thermal stability and low power consumption. The study investigated the effect of film thickness and zinc content on the optical properties of thermally evaporated Sb10Se90-xZnx (x = 0, 5, 10 & 15 at. %) thin films. It was found that transmittance (T~ 85-40%) and optical band gap energy (Eopt ~ 1.60 eV – 1.22 eV) decreased but absorption coefficient (α~0.840–2.031 104 cm–1) increased with increase in zinc content. Furthermore, as the film thickness increased from 53 ± 5 nm to 286 ± 10 nm, transmittance decreased but band gap energy increased due to zinc defects and localized states in the Sb10Se90-xZnx system.Keywords: Selenium; phase change memory; localized state

Sensitive detection of EBV microRNAs across cancer spectrum reveals association with decreased survival in adult acute myelocytic leukemia

Epstein Barr virus (EBV) is the etiologic agent involved in numerous human cancers. After infecting the host, EBV establishes a latent infection, with low levels of messenger RNA (mRNA) and protein expression, evolved to evade immune recognition. Conversely, EBV microRNAs (miRNA) are expressed ubiquitously and abundantly within infected cells. Their role in tumor biology and clinical outcomes across the spectrum of cancer is not fully explained. Here, we applied our bioinformatics pipeline for quantitative EBV miRNA detection to examine sequencing data of 8,955 individual tumor samples across 27 tumor types representing the breadth of cancer. We uncover an association of intermediate levels of viral miRNA with decreased survival in adult acute myeloid leukemia (AML) patients (P = 0.00013). Prognostic modeling of this association suggests that increased EBV miRNA levels represent an independent risk factor for poor patient outcomes. Furthermore, we explore differences in expression between elevated and absent viral miRNA loads in adult AML tumors finding that EBV positivity was associated with proinflammatory signals. Together, given no associations were found for pediatric AML, our analyses suggests EBV positivity has the potential for being a prognostic biomarker and might represent a surrogate measure related to immune impairment in adult patients

Differential Gene Expression Analysis and Clinical Correlations within Endemic Burkitt Lymphoma

Endemic Burkitt lymphoma (eBL) is the most common pediatric cancer in equatorial Africa and is associated with malaria and Epstein-Barr virus co-infections. Molecular alterations within the eBL tumor genome and transcriptome have not been adequately investigated or compared to sporadic Burkitt lymphoma (sBL). Given that eBL has distinct clinical presentations in the jaw as opposed to the abdomen which are associated with survival, we hypothesize that transcriptome sequencing (RNA-seq) and potentially underlying genetic alterations will enhance our understanding of pathogenesis. Our results compare genome-wide RNA transcript abundances between eBL tumors from children (ages 6-7 yrs) with Stage I (Jaw tumor, n=14) and Stage II (abdominal, n=24) disease from Western Kenya to previously published work analyzing sBL which present in older children residing in developed countries and that tend not to be associated with EBV. Our initial analysis confirms mutational changes with likely functional alterations in the genes ID3 and TCF3, the key regulators of oncogenic pathways implicated in BL. However, the specific mutations observed in sBL are at lower frequency within eBL cases. This work represents the first comprehensive gene expression profile analysis of different eBL tumors. Hierarchical clustering, gene ontology and pathway analysis will provide insight into pathogenesis and new targets for chemotherapy

Comparing Floristic Diversity between a Silviculturally Managed Arboretum and a Forest Reserve in Dambulla, Sri Lanka

Repeated slash and burn cultivation creates wasteland with thorny shrubs, which then takes a long time to become secondary forests through serial stages of succession. Assisted natural regeneration through silvicultural management is a useful restoration method to accelerate succession. This survey evaluates the effectiveness of a simple silvicultural method for the rehabilitation of degraded lands to productive forest, thereby increasing floristic wealth. Field-based comparative analyses of floristic composition were carried out at a silviculturally managed forest (Popham Arboretum) and a primary forest (Kaludiyapokuna Forest Reserve) which is located in Dambulla in Sri Lanka. Floristic analysis was used to examine the effectiveness of silvicultural techniques for successful restoration of degraded forest in the dry zone. Nine 20 m × 20 m plots in each forest were enumerated and the vegetation ≥ 10 cm girth at breast height was quantitatively analyzed. Cluster analysis resulted in five distinguishable clusters (two from Popham Arboretum and three from Kaludiyapokuna Forest Reserve). Similarity indices were generated to compare the plots within and between sites. Floristic similarity was higher in forest reserve plots compared to arboretum plots. A total of 72 plant species belonging to 60 genera and 26 families were recorded from the study sites. Of the recorded species, Grewia damine and Syzygium cumini (Importance Value Index, IVI = 24 and 23 respectively) were the ecologically co-dominant taxa at the Popham Arboretum. In contrast, Mischodon zeylanicus (IVI = 31), Schleichera oleosa (IVI = 25) and Diospyros ebenum (IVI = 21) were the abundant taxa in the forest reserve