105 research outputs found
Dimensions of Francis Fukuyama’s “The End of History” Vision in the Eastern Europe of the Post-Cold War: Reconsideration of Nationalism
Following the Second World War, the Cold War initiated a bipolar contest for superiority that would last for decades, and in this era the Soviet Union established communist regimes in Eastern Europe. Nationalism, which the Soviet Union tried to oppress but which played a role in the delegitimization of Soviet control, became an important topic of discussion between authorisation regimes and democratisation efforts in the world politics. During and after the Cold War period several thoughts were introduced about nationalism from different perspectives. Francis Fukuyama was among the important figures who thought about nationalism at that time. In his book “The End of History”, Fukuyama touched upon nationalism to explain the struggle for recognition and argued that nationalism is a form of recognition. In this context, this article first focuses on the historical timeline and nationalism in Eastern Europe in the Cold War era. Then, it examines the events that took place in Eastern Europe in the aftermath of the Cold War by concentrating on Fukuyama’s inferences about nationalism and seeks an answer to the reconsideration of nationalism
Evaluation of the potency of FDA-approved drugs on wild type and mutant SARS-CoV-2 helicase (Nsp13)
SARS-CoV-2 has caused COVID-19 outbreak with nearly 2 M infected people and over 100K death worldwide,
until middle of April 2020. There is no confirmed drug for the treatment of COVID-19 yet. As the disease spread
fast and threaten human life, repositioning of FDA approved drugs may provide fast options for treatment. In this
aspect, structure-based drug design could be applied as a powerful approach in distinguishing the viral drug target regions from the host. Evaluation of variations in SARS-CoV-2 genome may ease finding specific drug targets
in the viral genome. In this study, 3458 SARS-CoV-2 genome sequences isolated from all around the world were
analyzed. Incidence of C17747T and A17858G mutations were observed to be much higher than others and they
were on Nsp13, a vital enzyme of SARS-CoV-2. Effect of these mutations was evaluated on protein-drug interactions using in silico methods. The most potent drugs were found to interact with the key and neighbor residues of
the active site responsible from ATP hydrolysis. As result, cangrelor, fludarabine, folic acid and polydatin were determined to be the most potent drugs which have potency to inhibit both the wild type and mutant SARS-CoV-2
helicase. Clinical data supporting these findings would be important towards overcoming COVID-19
Targeting SARS-CoV-2 Nsp12/Nsp8 interaction interface with approved and investigational drugs: anin silicostructure-based approach
In this study, the Nsp12-Nsp8 complex of SARS-CoV-2 was targeted with structure-based and computer-aided drug design approach because of its vital role in viral replication. Sequence analysis of RNA-dependent RNA polymerase (Nsp12) sequences from 30,366 different isolates were analysed for possible mutations. FDA-approved and investigational drugs were screened for interaction with both mutant and wild-type Nsp12-Nsp8 interfaces. Sequence analysis revealed that 70.42% of Nsp12 sequences showed conserved P323L mutation, located in the Nsp8 binding cleft. Compounds were screened for interface interaction, any with XP GScores lower than -7.0 kcal/mol were considered as possible interface inhibitors. RX-3117 (fluorocyclopentenyl cytosine) and Nebivolol had the highest binding affinities in both mutant and wild-type enzymes, therefore they were selected and resultant protein-ligand complexes were simulated for analysis of stability over 100 ns. Although the selected ligands had partial mobility in the binding cavity, they were not removed from the binding pocket after 100 ns. The ligand RX-3117 remained in the same position in the binding pocket of the mutant and wild-type enzyme after 100 ns MD simulation. However, the ligand Nebivolol folded and embedded in the binding pocket of mutant Nsp12 protein. Overall, FDA-approved and investigational drugs are able to bind to the Nsp12-Nsp8 interaction interface and prevent the formation of the Nsp12-Nsp8 complex. Interruption of viral replication by drugs proposed in this study should be further tested to pave the way forin vivostudies towards the treatment of COVID-19
Targeting SARS-CoV-2 Nsp12/Nsp8 interactioninterface with approved and investigational drugs:an in silico structure-based approach
In this study, the Nsp12–Nsp8 complex of SARS-CoV-2 was targeted with structure-based and com-puter-aided drug design approach because of its vital role in viral replication. Sequence analysis ofRNA-dependent RNA polymerase (Nsp12) sequences from 30,366 different isolates were analysed forpossible mutations. FDA-approved and investigational drugs were screened for interaction with bothmutant and wild-type Nsp12–Nsp8 interfaces. Sequence analysis revealed that 70.42% of Nsp12sequences showed conserved P323L mutation, located in the Nsp8 binding cleft. Compounds werescreened for interface interaction, any with XP GScores lower than 7.0kcal/mol were considered aspossible interface inhibitors. RX-3117 (fluorocyclopentenyl cytosine) and Nebivolol had the highestbinding affinities in both mutant and wild-type enzymes, therefore they were selected and resultantprotein–ligand complexes were simulated for analysis of stability over 100ns. Although the selectedligands had partial mobility in the binding cavity, they were not removed from the binding pocketafter 100ns. The ligand RX-3117 remained in the same position in the binding pocket of the mutantand wild-type enzyme after 100ns MD simulation. However, the ligand Nebivolol folded andembedded in the binding pocket of mutant Nsp12 protein. Overall, FDA-approved and investigationaldrugs are able to bind to the Nsp12–Nsp8 interaction interface and prevent the formation of theNsp12–Nsp8 complex. Interruption of viral replication by drugs proposed in this study should be fur-ther tested to pave the way forin vivostudies towards the treatment of COVID-19
The Use of Total Artificial Heart With Example of Cases for End-Stage Heart Failure Therapy
29th Turkish Cardiology Congress of the Turkish-Society-of-Cardiology (TSC) with International Participation -- OCT 26-29, 2013 -- Antalya, TURKEYWOS: 000329858400098Turkish Soc Cardio
Florid cemento osseous dysplasia and dentygerous cyst in a patient with apert syndrome: A case report
Apert syndrome is a rare congenital malformation
characterized by craniocinocytosis, craniofacial anomalies and symmetric
syndactyly of the feet and hands. Oral manifestations of Apert syndrome usually
represents bifid uvula, malposition of the teeth, severe open bite, tooth decay
and periodontal diseases. Fluorid cemento-osseous dysplasia is usually
asymptomatic slow-growing non-neoplastic fibro-osseous lesions. Lesions are
detected by routine radiographic examination. The aim of this case report is to
present dentigerous cyst and florid cemento-osseous displasia in a patient
with Apert syndrome. A 38-year-old female patient with a history of Apert
syndrome referred to Marmara University, Faculty of Dentistry, Clinic
of Oral and Dentomaxillofacial Radiology due to pain and swelling. On
panoramic radiography, unilocular, hyperdense lesion with regular borders was
observed in the anterior region of the mandible. Cone-beam computed tomography
(CBCT) was performed for further examination of the lesion and perforation of
buccal bone cortex was seen. Additionally, a regular monolocular hypodense
lesion was observed in the anterior region of maxilla. A biopsy was performed
to examine the lesion histopathologically. Histopathologic examination was
performed to evaluate the lesions and the lesion in the mandible was diagnosed
as cemento-osseous dysplasia. Because the lesion was multifocal, it was considered
and compatible with fluoride cemento-osseous dysplasia. The lesion in the
maxilla was diagnosed as dentigerous cyst on histopathologic examination. The
diagnosis of fluoride cemento-osseous dysplasia is established by definite
radiological and histopathological evaluation. In asymptomatic cases of fluorid
cemento-osseous dysplasia, treatment is not required but patients should be
followed up regularly. Practitioners should take into consideration the oral
and dental findings in patients with Apert syndrome which rarely appear.KEYWORDS
Apert Syndrome, florid
cementoosseous dysplasia, dentigerous cys
Active shrinkage protects neurons following axonal transection
Trauma, vascular events, or neurodegenerative processes can lead to axonal injury and eventual transection (axotomy). Neurons can survive axotomy, yet the underlying mechanisms are not fully understood. Excessive water entry into injured neurons poses a particular risk due to swelling and subsequent death. Using in vitro and in vivo neurotrauma model systems based on laser transection and surgical nerve cut, we demonstrated that axotomy triggers actomyosin contraction coupled with calpain activity. As a consequence, neurons shrink acutely to force water out through aquaporin channels preventing swelling and bursting. Inhibiting shrinkage increased the probability of neuronal cell death by about 3-fold. These studies reveal a previously unrecognized cytoprotective response mechanism to neurotrauma and offer a fresh perspective on pathophysiological processes in the nervous system.Yüzüncü Yıl Universit
Solving time-dependent heat conduction problems using metaheuristic algorithms extended with a novel local search strategy
This study proposes a novel and dexterous local search scheme for improving the exploitation phase of a generic metaheuristic algorithm. The proposed local search considers a twofold probing mechanism, which takes advantage of a chaotic number generated by the hybrid chaotic map composed of Logistic map and Kent map to move around the so-far-obtained global best solutions to reach feasible candidate solutions. Also, an iterative local search scheme inspired by a variant of the differential evolution algorithm is incorporated into the proposed manipulation scheme to enhance intensification on the promising regions. The proposed scheme is included in the well-reputed metaheuristics of differential evolution, crow search, whale optimization, and sine-cosine algorithms to assess the resulting improvements made on the optimization accuracy. Forty optimization benchmark functions composed of unimodal and multimodal test problems have been solved by the local search improved and basic forms of these optimizers to identify the amelioration in terms of solution accuracy and robustness. Two different real-world constrained optimization problems have been solved by these algorithms to analyze the improvement in solution qualities maintained by the utilization of the proposed local search method. Furthermore, these mentioned optimization algorithms along with their improved forms have been applied to one-dimensional transient heat conduction problems to obtain accurate temperature distribution across the heat transfer medium. Optimization results reveal that utilizing local search enhanced metaheuristic algorithms can be considered a favorable alternative to conventional solution methods for solving transient heat conduction problems
A novel chaotic manta-ray foraging optimization algorithm for thermo-economic design optimization of an air-fin cooler
This research study aims to introduce chaos theory into the Manta Ray Foraging Optimization (MRFO) Algorithm and optimize a real-world design problem through the chaos-enhanced versions of this method. Manta Ray Foraging Optimization algorithm is a bio-inspired swarm intelligence-based metaheuristic algorithm simulating the distinctive food search behaviors of the manta rays. However, MRFO suffers from some intrinsic algorithmic inefficiencies such as slow and premature convergence and unexpected entrapment to the local optimum points in the search domain like most of the metaheuristic algorithms in the literature. Recently, random numbers generated by chaos theory have been incorporated into the metaheuristic algorithms to solve these problems. More than twenty chaotic maps are applied to the base algorithm and ten best performing methods are considered for performance evaluation on high-dimensional optimization test problems. Forty test problems comprising unimodal and multimodal functions have been solved by chaotic variants of MRFO and extensive statistical analysis is performed. Furthermore, thermo-economic design optimization of an air-fin cooler is maintained by the chaotic MRFO variants to assess their optimization capabilities over complex engineering design problems. Ten decisive design variables of an air fin cooler are optimized in terms of total annual cost rates and optimum solutions obtained by five best chaotic MRFO algorithms are compared to the preliminary design. A significant improvement is observed in the objective function values when MRFO with chaotic operators is applied to this considered thermal design problem
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