141 research outputs found
Mueller matrix polarimetry of plasmon resonant silver nano-rods: biomedical prospects
Fundamental understanding of the light-matter interaction in the context of
nano-particles is immensely bene- fited by the study of geometry dependent
tunable Localized Surface Plasmon Resonance (LSPR) and has been demonstrated to
have potential applications in various areas of science. The polarization
characteristics of LSPR in addition to spectroscopic tuning can be suitably
exploited in such systems as contrast enhancement mech- anisms and control
parameters. Such polarization characteristics like diattenuation and retardance
have been studied here using a novel combination of Muller-matrix polarimetry
with the T-matrix matrix approach for silver nano-rods to show unprecedented
control and sensitivity to local refractive index variations. The study carried
out over various aspect ratios for a constant equal volume sphere radius shows
the presence of longitu- dinal (dipolar and quadrupolar) and transverse
(dipolar) resonances; arising due to differential contribution of
polarizabilities in two directions. The overlap regions of these resonances and
the resonances themselves exhibit enhanced retardance and diattenuation
respectively. The spectral and amplitude tunability of these polarimetric
parameters through the aspect ratios to span from the minimum to maximum ([0,
1] in the case of diattenuation and [0, {\pi}] in the case of retardance)
presents a novel result that could be used to tailor systems for study of
biological media. On the other hand, the high sensitivity of diattenuation dip
(caused by equal contribution of polarizabilities) could be possibly used for
medium characterization and bio-sensing or bio-imaging studies.Comment: 8 pages, 6 figures, Proceedings of the Saratov Fall Meeting, 201
Automated detection of brain abnormalities in neonatal hypoxia ischemic injury from MR images.
We compared the efficacy of three automated brain injury detection methods, namely symmetry-integrated region growing (SIRG), hierarchical region splitting (HRS) and modified watershed segmentation (MWS) in human and animal magnetic resonance imaging (MRI) datasets for the detection of hypoxic ischemic injuries (HIIs). Diffusion weighted imaging (DWI, 1.5T) data from neonatal arterial ischemic stroke (AIS) patients, as well as T2-weighted imaging (T2WI, 11.7T, 4.7T) at seven different time-points (1, 4, 7, 10, 17, 24 and 31 days post HII) in rat-pup model of hypoxic ischemic injury were used to assess the temporal efficacy of our computational approaches. Sensitivity, specificity, and similarity were used as performance metrics based on manual ('gold standard') injury detection to quantify comparisons. When compared to the manual gold standard, automated injury location results from SIRG performed the best in 62% of the data, while 29% for HRS and 9% for MWS. Injury severity detection revealed that SIRG performed the best in 67% cases while 33% for HRS. Prior information is required by HRS and MWS, but not by SIRG. However, SIRG is sensitive to parameter-tuning, while HRS and MWS are not. Among these methods, SIRG performs the best in detecting lesion volumes; HRS is the most robust, while MWS lags behind in both respects
Signum phase mask differential microscopy
We propose and experimentally demonstrate a differential microscopy method to
obtain simultaneous amplitude, phase, and quantitative polarization gradient
imaging in a single experimental embodiment. A full-field optical spatial
differentiator is achieved in a relatively simple setup by placing a glass
cover slip as a Signum phase mask in the Fourier plane of a standard 4-f
imaging system and accordingly named Signum phase mask differential microscopy.
The longstanding requisite of polarized light to obtain the spatial
differentiation of the field at the object plane is eliminated in our scheme
and, hence, leads to the emergence of quantitative differential polarization
contrast imaging by integrating polarization degree of freedom as an additional
contrast agent in the framework of differential microscopy. Implementation of
the proposed differential imaging scheme in high-resolution microscopy is
experimentally demonstrated alongside its functionality for a broad wavelength
range. Simultaneous acquisition of differential phase, amplitude, and
polarization (anisotropy) gradient imaging in a rather elementary optical setup
enables a low-cost multi-functional differential microscopy system that is
anticipated to emerge as a revolutionary tool in label-free imaging and optical
image processing
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