39 research outputs found
Fig.5b_3FTx_LNTX_Jalview
Primary multiple sequence alignment of Fig.5b (LNTX) performed with MUSCLE program using Jalview software
Fig.6_3FTxs_phylo_FigTree
Primary file of phylogenetic tree constructed with Mega 6 using the Maximum Likelihood method and FigTree 1.4 used to produce the phylogenetic tree figures
Fig.5c_3FTx_SNTX_Jalview
Primary multiple sequence alignment of Fig.5c (SNTX) performed with MUSCLE program using Jalview software
Malaysian Ophiophagus hannah 1D-SDS-PAGE-nano-ESI-LCMS/MS venom proteome
The file contains the shotgun analyses results of Malaysian Ophiophagus hannah using the combination approaches of 1D-SDS-PAGE and nano-LCMS. The number of toxins identified and its relative abundance in every gel section were integrated and reported in the analyses
Sequence comparision of Malaysian Ophiophagus hannah (MOh; current study) with Balinese species (BOh; Vonk et al. [20]) and other reported O. hannah toxins deposited in public database
Sequence comparision of Malaysian Ophiophagus hannah (MOh; current study) with Balinese species (BOh; Vonk et al. 2013) and other reported O. hannah toxins deposited in public database was carried out in the analyses
Fig.6_3FTxs_phylo_alignment_Mega6
Primary multiple sequence alignment file of Fig.6 performed with MUSCLE program using Mega6 software
Fig.11_PLA2_Jalview
Primary multiple sequence alignment of Fig.11 (PLA2) performed with MUSCLE program using Jalview software
Fig.12_CVF_Jalview
Primary multiple sequence alignment of Fig.12 (CVF) performed with MUSCLE program using Jalview software
Additional file 1_Malaysian Ophiophagus hannah transcriptome transcripts (FPKM >1)
The sequenced reads were annotated and filtered in the analyses. The annotated reads were further classified into toxin, non-toxin and unidentified, together with the redundancy calculated in subsequent data sheets
Fig.10_Vespryn_Jalview
Primary multiple sequence alignment of Fig.10 (Vespryn) performed with MUSCLE program using Jalview software