8 research outputs found
Intervento alla tavola rotonda "Dove sta andando la critica letteraria?"
Marginalità rispetto alle altre letterature e alle altre forme di comunicazione. È questa, secondo lo studioso, la condizione attuale della letteratura italiana
nel sistema globalizzato. È necessario che l'interprete riscopra la sua triplice funzione - critico, filologo, storico della letteratura - per tentare di penetrare nel testo, anche grazie agli apporti fecondi della critica tematica e ai nuovi approcci interdisciplinari della comparatistica
Morphology, molecules, and taxonomy: extreme incongruence in pleurocerids (Gastropoda, Cerithioidea, Pleuroceridae)
<p>These are the datasets and associated trees from Whelan and Strong (2015) Morphology, molecules, and taxonomy: extreme incongruence in pleurocerids (Gastropoda, Cerithioidea, Pleuroceridae). <em>Zoological Scripta</em></p
Using genomics, morphometrics, and environmental niche modeling to test the validity of a narrow-range endemic snail, Patera nantahala (Gastropoda, Polygyridae)
Datasets from Whelan et al. "Using genomics, morphometrics, and environmental niche modeling to test the validity of a narrow-range endemic snail". See README and publication for details on specific files. </p
TLR_pathway_sequences
Toll-like receptor pathway homologs identified across deuterostomes. Homology assignment methodology can be seen in (DOI)
Nemertean Trinotate annotation reports
<p>These are Trinity assemblies, Trinotate annotation reports, and alignments for gene tree reconstruction from Whelan et al. (2014) Nemertean toxin genes revealed through transcriptome sequencing. <em>Genome Biology and Evolution</em>. doi:10.1093/gbe/evu258</p
Shell Photographs
Shell photographs of museum lots relevant to the manuscript "On the identity of <i>Leptoxis taeniata</i> – a misapplied name
for the federally threatened Painted Rocksnail (Cerithioidea: Pleuroceridae)"<p></p
Data from "Surveys that prioritize site number over time per site will result in better gastropod status assessments: a case study on the rediscovery of Big Black Rocksnail"
Freshwater gastropods are among the most imperiled organisms on earth. Yet, they are among the most understudied freshwater taxon. Many freshwater gastropod species have gone extinct in the last 100 years, but recent rediscoveries indicate that inadequate survey work has resulted in some species being prematurely declared extinct. Such premature declaration of extinction can remove legal protections for species, which could then actually cause extinction. Thus, research and policy recommendations are needed so surveys provide the best information possible for conservation. Here, we examined the case of Lithasia hubrichti, a freshwater gastropod endemic to the Big Black River in Mississippi that was last seen in 1965. In 2022, a freshwater mollusk survey resulted in finding L. hubrichti alive. An additional survey effort in 2023 that prioritized sampling as many sites as possible in a single day clarified the current range of L. hubrichti. Genomic analyses indicated that the species has persisted with a large population size for thousands of years, rather than ever falling below a survey detection limit. When considering the case of L. hubrichti and other recent freshwater gastropod rediscoveries, we conclude that freshwater gastropod surveys should emphasize sampling as many sites as possible when targeting rare species, rather than expending high sampling effort at a small number of sites. We also advocate for policies that encourage partnerships with landowners, which was required to rediscover L. hubrichti.</p
Ctenophora Phylogeny Datasets and Core Orthologs
Data matrices, models used with RAxML, and inferred trees. Unless otherwise noted, all trees were inferred with RAxML using partitioning schemes and models in the model file. <div><br></div><div>Figures for ancestral state reconstruction using a posterior distribution of trees to incorporate uncertainty in branch-length estimates are included. </div><div><br></div><div>Pictures of species we sampled that we were able to photograph before obtaining tissue are included.<br><div><br></div><div>Core orthologs, for use with hamstr, that were used for ctenophore-centric data creation are also provided</div></div